RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 AACSQ86V21 672 aa17.77■□□□□ 0.44
PPP4R3A-201ENST00000554308 PPP1R9BQ96SB3 815 aa17.77■□□□□ 0.44
PPP4R3A-201ENST00000554308 REC8O95072 547 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 PTMSP20962 102 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 CLEC17AQ6ZS10 378 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 GLI3P10071 1580 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 DISP2A7MBM2 1401 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 SPATA31A1Q5TZJ5 1347 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 STARD3NLO95772 234 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 CHMLP26374 656 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 ERC1Q8IUD2 1116 aa17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 CCDC8Q9H0W5 538 aaPredicted RBP17.76■□□□□ 0.43
PPP4R3A-201ENST00000554308 COL16A1Q07092 1604 aaPredicted RBP17.75■□□□□ 0.43
PPP4R3A-201ENST00000554308 TNS2Q63HR2 1409 aa17.75■□□□□ 0.43
PPP4R3A-201ENST00000554308 ZGPATQ8N5A5 531 aaKnown RBP17.75■□□□□ 0.43
PPP4R3A-201ENST00000554308 SLC4A9Q96Q91 983 aa17.75■□□□□ 0.43
PPP4R3A-201ENST00000554308 CWC25Q9NXE8 425 aaPredicted RBP17.75■□□□□ 0.43
PPP4R3A-201ENST00000554308 RABEP1Q15276 862 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 ESYT1Q9BSJ8 1104 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 KIAA1211Q6ZU35 1233 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 LMBRD1Q9NUN5 540 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 PHLPP1O60346 1717 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 TOGARAM1Q9Y4F4 1720 aa17.74■□□□□ 0.43
PPP4R3A-201ENST00000554308 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
PPP4R3A-201ENST00000554308 TEX13AQ9BXU3 409 aaPredicted RBP17.73■□□□□ 0.43
PPP4R3A-201ENST00000554308 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
PPP4R3A-201ENST00000554308 RBSNQ9H1K0 784 aa17.73■□□□□ 0.43
PPP4R3A-201ENST00000554308 AOX1Q06278 1338 aa17.73■□□□□ 0.43
PPP4R3A-201ENST00000554308 BCL9O00512 1426 aa17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 CYP2E1P05181 493 aaPredicted RBP17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 CASP7P55210 303 aa17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 TLR7Q9NYK1 1049 aaKnown RBP17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 H7C1W4 665 aa17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 PTPN12Q05209 780 aaKnown RBP17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 IL25Q9H293 177 aa17.72■□□□□ 0.43
PPP4R3A-201ENST00000554308 COL22A1Q8NFW1 1626 aaPredicted RBP17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 GLRX3O76003 335 aaKnown RBP17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 CNTROBQ8N137 903 aa17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 NGLY1Q96IV0 654 aa17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
PPP4R3A-201ENST00000554308 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 KIF6Q6ZMV9 814 aa17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 MARCH10Q8NA82 808 aaPredicted RBP17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 GPT2Q8TD30 523 aa17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 GPATCH3Q96I76 525 aa17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 ZDHHC9Q9Y397 364 aa17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 TTC41PQ6P2S7 1318 aa17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 ZNF445P59923 1031 aa17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 CDCA7Q9BWT1 371 aaPredicted RBP17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 THRAP3Q9Y2W1 955 aaKnown RBP17.7■□□□□ 0.42
PPP4R3A-201ENST00000554308 CYP19A1P11511 503 aaPredicted RBP17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 FOXO4P98177 505 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 TCIRG1Q13488 830 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 FAM98CQ17RN3 349 aaKnown RBP17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 ANP32BQ92688 251 aaKnown RBP17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 COPRSQ9NQ92 184 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 ZBTB1Q9Y2K1 713 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 LAMB4A4D0S4 1761 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 SPATA31A5Q5VU36 1347 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 SPATA31A7Q8IWB4 1347 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 ARFGEF2Q9Y6D5 1785 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 GPTP24298 496 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 NUCB2P80303 420 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 TFCP2Q12800 502 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 ZMYND15Q9H091 742 aa17.69■□□□□ 0.42
PPP4R3A-201ENST00000554308 HLFQ16534 295 aa17.68■□□□□ 0.42
PPP4R3A-201ENST00000554308 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
PPP4R3A-201ENST00000554308 TPM2P07951 284 aa17.68■□□□□ 0.42
PPP4R3A-201ENST00000554308 BOLA2Q9H3K6 86 aa17.68■□□□□ 0.42
PPP4R3A-201ENST00000554308 TBC1D2BQ9UPU7 963 aa17.68■□□□□ 0.42
PPP4R3A-201ENST00000554308 PAPPAQ13219 1627 aa17.67■□□□□ 0.42
PPP4R3A-201ENST00000554308 OFD1O75665 1012 aa17.67■□□□□ 0.42
PPP4R3A-201ENST00000554308 MSNP26038 577 aaKnown RBP17.67■□□□□ 0.42
PPP4R3A-201ENST00000554308 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
PPP4R3A-201ENST00000554308 ZNF594Q96JF6 807 aaPredicted RBP17.67■□□□□ 0.42
PPP4R3A-201ENST00000554308 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-201ENST00000554308 USP42Q9H9J4 1324 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-201ENST00000554308 KCNQ2O43526 872 aa17.66■□□□□ 0.42
PPP4R3A-201ENST00000554308 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
PPP4R3A-201ENST00000554308 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.66■□□□□ 0.42
PPP4R3A-201ENST00000554308 PALD1Q9ULE6 856 aa17.66■□□□□ 0.42
PPP4R3A-201ENST00000554308 ITGB4P16144 1822 aa17.65■□□□□ 0.42
PPP4R3A-201ENST00000554308 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms