RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
ATXN3-224ENST00000554040 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
ATXN3-224ENST00000554040 TNS2Q63HR2 1409 aa9.97□□□□□ -0.81
ATXN3-224ENST00000554040 SLIT3O75094 1523 aa9.97□□□□□ -0.81
ATXN3-224ENST00000554040 SSTR3P32745 418 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-224ENST00000554040 AMHR2Q16671 573 aa9.96□□□□□ -0.82
ATXN3-224ENST00000554040 CYP4X1Q8N118 509 aa9.96□□□□□ -0.82
ATXN3-224ENST00000554040 DNAJC5GQ8N7S2 189 aa9.96□□□□□ -0.82
ATXN3-224ENST00000554040 PAPPAQ13219 1627 aa9.96□□□□□ -0.82
ATXN3-224ENST00000554040 IL2RBP14784 551 aa9.95□□□□□ -0.82
ATXN3-224ENST00000554040 JUNDP17535 347 aa9.95□□□□□ -0.82
ATXN3-224ENST00000554040 CD2APQ9Y5K6 639 aa9.95□□□□□ -0.82
ATXN3-224ENST00000554040 ADCY9O60503 1353 aa9.95□□□□□ -0.82
ATXN3-224ENST00000554040 COL18A1P39060 1754 aa9.95□□□□□ -0.82
ATXN3-224ENST00000554040 TOPAZ1Q8N9V7 1692 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 TTC21BQ7Z4L5 1316 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 SMPD1P17405 629 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 KCNQ4P56696 695 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 SKOR1P84550 965 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 SPIRE2Q8WWL2 714 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 MRGPRX2Q96LB1 330 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 NLRP2Q9NX02 1062 aa9.94□□□□□ -0.82
ATXN3-224ENST00000554040 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-224ENST00000554040 NBPF1Q3BBV0 1214 aa9.93□□□□□ -0.82
ATXN3-224ENST00000554040 RETREG3Q86VR2 466 aa9.93□□□□□ -0.82
ATXN3-224ENST00000554040 COL23A1Q86Y22 540 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-224ENST00000554040 KRI1Q8N9T8 703 aaKnown RBP9.93□□□□□ -0.82
ATXN3-224ENST00000554040 KAT6BQ8WYB5 2073 aa9.93□□□□□ -0.82
ATXN3-224ENST00000554040 ARHGEF28Q8N1W1 1705 aaKnown RBP9.93□□□□□ -0.82
ATXN3-224ENST00000554040 FDX1P10109 184 aa9.92□□□□□ -0.82
ATXN3-224ENST00000554040 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-224ENST00000554040 COL13A1Q5TAT6 717 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-224ENST00000554040 AKAP12Q02952 1782 aa9.92□□□□□ -0.82
ATXN3-224ENST00000554040 TTC21AQ8NDW8 1320 aa9.91□□□□□ -0.82
ATXN3-224ENST00000554040 NHSQ6T4R5 1651 aa9.91□□□□□ -0.82
ATXN3-224ENST00000554040 NDUFV2P19404 249 aa9.91□□□□□ -0.82
ATXN3-224ENST00000554040 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
ATXN3-224ENST00000554040 PTCRAQ6ISU1 281 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-224ENST00000554040 GIGYF2Q6Y7W6 1299 aaKnown RBP9.91□□□□□ -0.82
ATXN3-224ENST00000554040 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
ATXN3-224ENST00000554040 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
ATXN3-224ENST00000554040 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
ATXN3-224ENST00000554040 TTC24A2A3L6 582 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-224ENST00000554040 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
ATXN3-224ENST00000554040 J3QL48 77 aa9.9□□□□□ -0.82
ATXN3-224ENST00000554040 CCNL1Q9UK58 526 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-224ENST00000554040 ABCC6O95255 1503 aa9.9□□□□□ -0.82
ATXN3-224ENST00000554040 PCNTO95613 3336 aa9.9□□□□□ -0.83
ATXN3-224ENST00000554040 COL24A1Q17RW2 1714 aa9.9□□□□□ -0.83
ATXN3-224ENST00000554040 TOMM70O94826 608 aa9.89□□□□□ -0.83
ATXN3-224ENST00000554040 PRELPP51888 382 aa9.89□□□□□ -0.83
ATXN3-224ENST00000554040 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-224ENST00000554040 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
ATXN3-224ENST00000554040 ANKRD24Q8TF21 1146 aa9.89□□□□□ -0.83
ATXN3-224ENST00000554040 SYTL4Q96C24 671 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-224ENST00000554040 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
ATXN3-224ENST00000554040 AXIN1O15169 862 aa9.88□□□□□ -0.83
ATXN3-224ENST00000554040 WNT7BP56706 349 aa9.88□□□□□ -0.83
ATXN3-224ENST00000554040 RC3H1Q5TC82 1133 aaKnown RBP9.88□□□□□ -0.83
ATXN3-224ENST00000554040 FLAD1Q8NFF5 587 aa9.88□□□□□ -0.83
ATXN3-224ENST00000554040 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
ATXN3-224ENST00000554040 WNK3Q9BYP7 1800 aa9.88□□□□□ -0.83
ATXN3-224ENST00000554040 EVC2Q86UK5 1308 aa9.87□□□□□ -0.83
ATXN3-224ENST00000554040 BTAF1O14981 1849 aa9.87□□□□□ -0.83
ATXN3-224ENST00000554040 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-224ENST00000554040 PARP9Q8IXQ6 854 aa9.87□□□□□ -0.83
ATXN3-224ENST00000554040 JMYQ8N9B5 988 aa9.87□□□□□ -0.83
ATXN3-224ENST00000554040 GMPR2Q9P2T1 348 aaKnown RBP9.87□□□□□ -0.83
ATXN3-224ENST00000554040 C6orf229H3BNL8 230 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 HMGB2P26583 209 aaKnown RBP9.86□□□□□ -0.83
ATXN3-224ENST00000554040 TNS4Q8IZW8 715 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 KLRG1Q96E93 195 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 WWC3Q9ULE0 1092 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 PIK3C2AO00443 1686 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 NFAT5O94916 1531 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 ANKRD36BQ8N2N9 1353 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 RAB3GAP2Q9H2M9 1393 aa9.86□□□□□ -0.83
ATXN3-224ENST00000554040 IGSF1Q8N6C5 1336 aa9.85□□□□□ -0.83
ATXN3-224ENST00000554040 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
ATXN3-224ENST00000554040 TRIM66O15016 1216 aa9.85□□□□□ -0.83
ATXN3-224ENST00000554040 HPS1Q92902 700 aa9.85□□□□□ -0.83
ATXN3-224ENST00000554040 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
ATXN3-224ENST00000554040 NSD2O96028 1365 aa9.85□□□□□ -0.83
ATXN3-224ENST00000554040 USP31Q70CQ4 1352 aa9.85□□□□□ -0.83
ATXN3-224ENST00000554040 RGPD5Q99666 1765 aa9.84□□□□□ -0.83
ATXN3-224ENST00000554040 MS4A1P11836 297 aa9.84□□□□□ -0.83
ATXN3-224ENST00000554040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATXN3-224ENST00000554040 KTN1Q86UP2 1357 aaKnown RBP9.84□□□□□ -0.83
ATXN3-224ENST00000554040 SIAH2O43255 324 aa9.83□□□□□ -0.84
ATXN3-224ENST00000554040 HTRA3P83110 453 aa9.83□□□□□ -0.84
ATXN3-224ENST00000554040 ZCRB1Q8TBF4 217 aaKnown RBP9.83□□□□□ -0.84
ATXN3-224ENST00000554040 IP6K1Q92551 441 aa9.83□□□□□ -0.84
ATXN3-224ENST00000554040 USP47Q96K76 1375 aa9.83□□□□□ -0.84
ATXN3-224ENST00000554040 CCNYL3P0C7X3 344 aa9.82□□□□□ -0.84
ATXN3-224ENST00000554040 PTPRNQ16849 979 aa9.82□□□□□ -0.84
ATXN3-224ENST00000554040 NME9Q86XW9 330 aa9.82□□□□□ -0.84
ATXN3-224ENST00000554040 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
ATXN3-224ENST00000554040 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
ATXN3-224ENST00000554040 NMRK2Q9NPI5 230 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 247.4 ms