RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
AF111169.3-201ENST00000553991 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
AF111169.3-201ENST00000553991 PPP2R1AP30153 589 aa17■□□□□ 0.31
AF111169.3-201ENST00000553991 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
AF111169.3-201ENST00000553991 SNED1Q8TER0 1413 aa17■□□□□ 0.31
AF111169.3-201ENST00000553991 NIP7Q9Y221 180 aaKnown RBP eCLIP17■□□□□ 0.31
AF111169.3-201ENST00000553991 BCORQ6W2J9 1755 aa17■□□□□ 0.31
AF111169.3-201ENST00000553991 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
AF111169.3-201ENST00000553991 GAS2L2Q8NHY3 880 aa16.99■□□□□ 0.31
AF111169.3-201ENST00000553991 NUDCQ9Y266 331 aa16.99■□□□□ 0.31
AF111169.3-201ENST00000553991 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
AF111169.3-201ENST00000553991 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
AF111169.3-201ENST00000553991 CELF2O95319 508 aaKnown RBP16.97■□□□□ 0.31
AF111169.3-201ENST00000553991 CRY2Q49AN0 593 aa16.97■□□□□ 0.31
AF111169.3-201ENST00000553991 USP16Q9Y5T5 823 aa16.97■□□□□ 0.31
AF111169.3-201ENST00000553991 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
AF111169.3-201ENST00000553991 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
AF111169.3-201ENST00000553991 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
AF111169.3-201ENST00000553991 CEMIPQ8WUJ3 1361 aa16.96■□□□□ 0.31
AF111169.3-201ENST00000553991 COL4A5P29400 1685 aa16.96■□□□□ 0.31
AF111169.3-201ENST00000553991 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
AF111169.3-201ENST00000553991 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
AF111169.3-201ENST00000553991 KCNQ3O43525 872 aa16.95■□□□□ 0.3
AF111169.3-201ENST00000553991 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
AF111169.3-201ENST00000553991 NIM1KQ8IY84 436 aa16.95■□□□□ 0.3
AF111169.3-201ENST00000553991 RALBP1Q15311 655 aa16.94■□□□□ 0.3
AF111169.3-201ENST00000553991 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
AF111169.3-201ENST00000553991 TRPM7Q96QT4 1865 aa16.94■□□□□ 0.3
AF111169.3-201ENST00000553991 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
AF111169.3-201ENST00000553991 NOGQ13253 232 aa16.93■□□□□ 0.3
AF111169.3-201ENST00000553991 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
AF111169.3-201ENST00000553991 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
AF111169.3-201ENST00000553991 CASP8AP2Q9UKL3 1982 aa16.93■□□□□ 0.3
AF111169.3-201ENST00000553991 HOXA10P31260 410 aaPredicted RBP16.92■□□□□ 0.3
AF111169.3-201ENST00000553991 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
AF111169.3-201ENST00000553991 ABCC12Q96J65 1359 aa16.91■□□□□ 0.3
AF111169.3-201ENST00000553991 PRAMEF22A3QJZ6 481 aa16.91■□□□□ 0.3
AF111169.3-201ENST00000553991 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
AF111169.3-201ENST00000553991 ZC3H15Q8WU90 426 aaKnown RBP16.91■□□□□ 0.3
AF111169.3-201ENST00000553991 GLIS2Q9BZE0 524 aaPredicted RBP16.91■□□□□ 0.3
AF111169.3-201ENST00000553991 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
AF111169.3-201ENST00000553991 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
AF111169.3-201ENST00000553991 NBPF26B4DH59 902 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 SOX10P56693 466 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 HLFQ16534 295 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 NBPF10Q6P3W6 841 aaKnown RBP16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 NBPF15Q8N660 670 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
AF111169.3-201ENST00000553991 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
AF111169.3-201ENST00000553991 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
AF111169.3-201ENST00000553991 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
AF111169.3-201ENST00000553991 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
AF111169.3-201ENST00000553991 SAGE1Q9NXZ1 904 aa16.89■□□□□ 0.29
AF111169.3-201ENST00000553991 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
AF111169.3-201ENST00000553991 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 GMPSP49915 693 aaPredicted RBP16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 CXCL9Q07325 125 aa16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 CDC37L1Q7L3B6 337 aa16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 ZNRF3Q9ULT6 936 aa16.88■□□□□ 0.29
AF111169.3-201ENST00000553991 AOC3Q16853 763 aa16.87■□□□□ 0.29
AF111169.3-201ENST00000553991 ZIC5Q96T25 663 aa16.87■□□□□ 0.29
AF111169.3-201ENST00000553991 TMX4Q9H1E5 349 aaPredicted RBP16.87■□□□□ 0.29
AF111169.3-201ENST00000553991 MYBBP1AQ9BQG0 1328 aaKnown RBP16.87■□□□□ 0.29
AF111169.3-201ENST00000553991 IBTKQ9P2D0 1353 aaPredicted RBP16.87■□□□□ 0.29
AF111169.3-201ENST00000553991 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
AF111169.3-201ENST00000553991 HUNKP57058 714 aa16.86■□□□□ 0.29
AF111169.3-201ENST00000553991 NEFMP07197 916 aa16.85■□□□□ 0.29
AF111169.3-201ENST00000553991 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
AF111169.3-201ENST00000553991 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
AF111169.3-201ENST00000553991 HIRAP54198 1017 aaPredicted RBP16.84■□□□□ 0.29
AF111169.3-201ENST00000553991 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
AF111169.3-201ENST00000553991 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
AF111169.3-201ENST00000553991 TNIP1Q15025 636 aa16.83■□□□□ 0.28
AF111169.3-201ENST00000553991 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
AF111169.3-201ENST00000553991 CCDC102AQ96A19 550 aa16.83■□□□□ 0.28
AF111169.3-201ENST00000553991 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
AF111169.3-201ENST00000553991 BCL2L13Q9BXK5 485 aa16.83■□□□□ 0.28
AF111169.3-201ENST00000553991 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
AF111169.3-201ENST00000553991 ATP6V0A2Q9Y487 856 aa16.83■□□□□ 0.28
AF111169.3-201ENST00000553991 MAP3K15Q6ZN16 1313 aa16.82■□□□□ 0.28
AF111169.3-201ENST00000553991 FAM155AB1AL88 458 aaPredicted RBP16.82■□□□□ 0.28
AF111169.3-201ENST00000553991 RGMBQ6NW40 437 aa16.82■□□□□ 0.28
AF111169.3-201ENST00000553991 RTF1Q92541 710 aaKnown RBP16.82■□□□□ 0.28
AF111169.3-201ENST00000553991 UBN2Q6ZU65 1347 aa16.81■□□□□ 0.28
AF111169.3-201ENST00000553991 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
AF111169.3-201ENST00000553991 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
AF111169.3-201ENST00000553991 USP48Q86UV5 1035 aa16.81■□□□□ 0.28
AF111169.3-201ENST00000553991 RNF186Q9NXI6 227 aa16.81■□□□□ 0.28
AF111169.3-201ENST00000553991 H7C1D1 291 aa16.8■□□□□ 0.28
AF111169.3-201ENST00000553991 TRPA1O75762 1119 aa16.8■□□□□ 0.28
AF111169.3-201ENST00000553991 RAD17O75943 681 aa16.8■□□□□ 0.28
AF111169.3-201ENST00000553991 KIAA2012Q0VF49 1180 aa16.8■□□□□ 0.28
AF111169.3-201ENST00000553991 SUSD4Q5VX71 490 aa16.8■□□□□ 0.28
AF111169.3-201ENST00000553991 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms