RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 L3MBTL2Q969R5 705 aa5.6□□□□□ -1.51
SLIRP-202ENST00000553981 EML1O00423 815 aa5.59□□□□□ -1.51
SLIRP-202ENST00000553981 NOS2P35228 1153 aa5.59□□□□□ -1.51
SLIRP-202ENST00000553981 PSME1Q06323 249 aa5.59□□□□□ -1.51
SLIRP-202ENST00000553981 TEAD4Q15561 434 aa5.59□□□□□ -1.51
SLIRP-202ENST00000553981 NFATC2IPQ8NCF5 419 aa5.59□□□□□ -1.51
SLIRP-202ENST00000553981 C7orf43Q8WVR3 580 aa5.59□□□□□ -1.51
SLIRP-202ENST00000553981 ELOA3CA0A087WX78 387 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-202ENST00000553981 ELOA3DA6NLF2 546 aaPredicted RBP5.58□□□□□ -1.52
SLIRP-202ENST00000553981 ELOA3BQ3SY89 546 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 TBCELQ5QJ74 424 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 LRRC69Q6ZNQ3 347 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 SYT9Q86SS6 491 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 SLC9A9Q8IVB4 645 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 TNS4Q8IZW8 715 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 DEPDC4Q8N2C3 294 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 ELOA3Q8NG57 546 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 MDFIQ99750 246 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 PLVAPQ9BX97 442 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 KIF21BO75037 1637 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 ABCA8O94911 1581 aa5.58□□□□□ -1.52
SLIRP-202ENST00000553981 CARMIL2Q6F5E8 1435 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 USP17L5A8MUK1 530 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 SH3PXD2AQ5TCZ1 1133 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 Q8N3U1 123 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 POM121Q96HA1 1249 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 ZNF232Q9UNY5 417 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 WDR7Q9Y4E6 1490 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 RAPGEF2Q9Y4G8 1499 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 SIGLEC1Q9BZZ2 1709 aa5.57□□□□□ -1.52
SLIRP-202ENST00000553981 SPATA31C1P0DKV0 1188 aa5.56□□□□□ -1.52
SLIRP-202ENST00000553981 ITGB7P26010 798 aa5.56□□□□□ -1.52
SLIRP-202ENST00000553981 SFSWAPQ12872 951 aaKnown RBP5.56□□□□□ -1.52
SLIRP-202ENST00000553981 DOC2BQ14184 412 aa5.56□□□□□ -1.52
SLIRP-202ENST00000553981 MAGI3Q5TCQ9 1506 aa5.56□□□□□ -1.52
SLIRP-202ENST00000553981 SERTM1A2A2V5 107 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 ARID3CA6NKF2 412 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 ADARB2-AS1A8MUL3 147 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 ZBTB7BO15156 539 aaPredicted RBP5.55□□□□□ -1.52
SLIRP-202ENST00000553981 SIN3BO75182 1162 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 ALAS2P22557 587 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 GATA4P43694 442 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 WWC1Q8IX03 1113 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 TPCN2Q8NHX9 752 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 ADAMTS19Q8TE59 1207 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 SLC30A3Q99726 388 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 NEUROD4Q9HD90 331 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 KIAA1024Q9UPX6 916 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 GPC6Q9Y625 555 aaPredicted RBP5.55□□□□□ -1.52
SLIRP-202ENST00000553981 ADAMTSL3P82987 1691 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 CD109Q6YHK3 1445 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 FRMPD1Q5SYB0 1578 aa5.55□□□□□ -1.52
SLIRP-202ENST00000553981 CFAP43Q8NDM7 1665 aa5.54□□□□□ -1.52
SLIRP-202ENST00000553981 ATP10BO94823 1461 aa5.54□□□□□ -1.52
SLIRP-202ENST00000553981 POM121CA8CG34 1229 aa5.54□□□□□ -1.52
SLIRP-202ENST00000553981 CLDN10P78369 228 aa5.54□□□□□ -1.52
SLIRP-202ENST00000553981 COL9A3Q14050 684 aaPredicted RBP5.54□□□□□ -1.52
SLIRP-202ENST00000553981 CCDC102BQ68D86 513 aa5.54□□□□□ -1.52
SLIRP-202ENST00000553981 RHPN1Q8TCX5 695 aa5.54□□□□□ -1.52
SLIRP-202ENST00000553981 TNFRSF25Q93038 417 aa5.54□□□□□ -1.52
SLIRP-202ENST00000553981 TEX14Q8IWB6 1497 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 USP17L3A6NCW0 530 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 USP17L4A6NCW7 530 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 M0R082 166 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 RAPGEF3O95398 923 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 PSMA6P60900 246 aaKnown RBP5.53□□□□□ -1.52
SLIRP-202ENST00000553981 USP17L2Q6R6M4 530 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 POTEAQ6S8J7 498 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 USP17L1Q7RTZ2 530 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 TRIM50Q86XT4 487 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 PLEKHM2Q8IWE5 1019 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 ZNF417Q8TAU3 575 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 HSH2DQ96JZ2 352 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 UCN2Q96RP3 112 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 ZNF587Q96SQ5 575 aaPredicted RBP5.53□□□□□ -1.52
SLIRP-202ENST00000553981 TSPAN10Q9H1Z9 355 aaPredicted RBP5.53□□□□□ -1.52
SLIRP-202ENST00000553981 SEMA6BQ9H3T3 888 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 STARD13Q9Y3M8 1113 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 CTTNBP2Q8WZ74 1663 aa5.53□□□□□ -1.52
SLIRP-202ENST00000553981 PTPRMP28827 1452 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 PRXQ9BXM0 1461 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 SPDYE3A6NKU9 549 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 ALBP02768 609 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 ATP1A2P50993 1020 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 HIRAP54198 1017 aaPredicted RBP5.52□□□□□ -1.53
SLIRP-202ENST00000553981 SPEM2Q0P670 501 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 PRRT3Q5FWE3 981 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 C1orf53Q5VUE5 145 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 C8orf86Q6ZUL3 223 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 RAB44Q7Z6P3 723 aaPredicted RBP5.52□□□□□ -1.53
SLIRP-202ENST00000553981 BRD7Q9NPI1 651 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 PRDM6Q9NQX0 595 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 HCN4Q9Y3Q4 1203 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 ARAP3Q8WWN8 1544 aa5.52□□□□□ -1.53
SLIRP-202ENST00000553981 LMTK3Q96Q04 1460 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 SFI1A8K8P3 1242 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 FAM229AH3BQW9 127 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 RAD21O60216 631 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 ADH7P40394 386 aa5.51□□□□□ -1.53
SLIRP-202ENST00000553981 KCNQ4P56696 695 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms