RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SUPT20HQ8NEM7 779 aa8.44□□□□□ -1.06
FOXN3-205ENST00000553904 XAGE3Q8WTP9 111 aa8.44□□□□□ -1.06
FOXN3-205ENST00000553904 TRMT112Q9UI30 125 aaKnown RBP8.44□□□□□ -1.06
FOXN3-205ENST00000553904 VIRMAQ69YN4 1812 aaKnown RBP8.44□□□□□ -1.06
FOXN3-205ENST00000553904 ARFGEF1Q9Y6D6 1849 aa8.44□□□□□ -1.06
FOXN3-205ENST00000553904 UTRNP46939 3433 aa8.44□□□□□ -1.06
FOXN3-205ENST00000553904 ZNF316A6NFI3 1004 aaPredicted RBP8.43□□□□□ -1.06
FOXN3-205ENST00000553904 DDNO94850 711 aaPredicted RBP8.43□□□□□ -1.06
FOXN3-205ENST00000553904 NTSR2O95665 410 aa8.43□□□□□ -1.06
FOXN3-205ENST00000553904 DDX58O95786 925 aaKnown RBP8.43□□□□□ -1.06
FOXN3-205ENST00000553904 PRELPP51888 382 aa8.43□□□□□ -1.06
FOXN3-205ENST00000553904 CCDC30Q5VVM6 783 aa8.43□□□□□ -1.06
FOXN3-205ENST00000553904 TMC4Q7Z404 712 aa8.43□□□□□ -1.06
FOXN3-205ENST00000553904 LRP10Q7Z4F1 713 aa8.43□□□□□ -1.06
FOXN3-205ENST00000553904 RIC3Q7Z5B4 369 aa8.43□□□□□ -1.06
FOXN3-205ENST00000553904 PNMA8AQ86V59 439 aaPredicted RBP8.43□□□□□ -1.06
FOXN3-205ENST00000553904 NLRP10Q86W26 655 aa8.43□□□□□ -1.06
FOXN3-205ENST00000553904 AFDNP55196 1824 aaKnown RBP8.43□□□□□ -1.06
FOXN3-205ENST00000553904 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-205ENST00000553904 GOLGA2Q08379 1002 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 TRIM28Q13263 835 aaKnown RBP8.42□□□□□ -1.06
FOXN3-205ENST00000553904 NCBP3Q53F19 620 aaKnown RBP8.42□□□□□ -1.06
FOXN3-205ENST00000553904 SP8Q8IXZ3 490 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 DNAJC5GQ8N7S2 189 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 ZNF277Q9NRM2 450 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-205ENST00000553904 MBIPQ9NS73 344 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 CHPF2Q9P2E5 772 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 ATP6V0A2Q9Y487 856 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 UBN2Q6ZU65 1347 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 SH3TC1Q8TE82 1336 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 SCN7AQ01118 1682 aa8.42□□□□□ -1.06
FOXN3-205ENST00000553904 BRCA1P38398 1863 aaKnown RBP8.41□□□□□ -1.06
FOXN3-205ENST00000553904 FZD9O00144 591 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 ANXA1P04083 346 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 ZNF853P0CG23 659 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 LMOD1P29536 600 aaPredicted RBP8.41□□□□□ -1.06
FOXN3-205ENST00000553904 CCDC27Q2M243 656 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 PROSER3Q2NL68 480 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 CHADLQ6NUI6 762 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 LDHDQ86WU2 507 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 NIM1KQ8IY84 436 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 GPC2Q8N158 579 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 LARGE2Q8N3Y3 721 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 MPNDQ8N594 471 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 KLRG1Q96E93 195 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 L3MBTL3Q96JM7 780 aaPredicted RBP8.41□□□□□ -1.06
FOXN3-205ENST00000553904 HACL1Q9UJ83 578 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
FOXN3-205ENST00000553904 RIC1Q4ADV7 1423 aa8.4□□□□□ -1.06
FOXN3-205ENST00000553904 POTECB2RU33 542 aa8.4□□□□□ -1.06
FOXN3-205ENST00000553904 ELL2O00472 640 aaPredicted RBP8.4□□□□□ -1.06
FOXN3-205ENST00000553904 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.06
FOXN3-205ENST00000553904 STK31Q9BXU1 1019 aa8.4□□□□□ -1.06
FOXN3-205ENST00000553904 PPIP5K2O43314 1243 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 HCLS1P14317 486 aaPredicted RBP8.39□□□□□ -1.07
FOXN3-205ENST00000553904 EPHX2P34913 555 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 NEXNQ0ZGT2 675 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 GRAPQ13588 217 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 TNIP1Q15025 636 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 SF3B3Q15393 1217 aaKnown RBP8.39□□□□□ -1.07
FOXN3-205ENST00000553904 KRT24Q2M2I5 525 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 EAPPQ56P03 285 aaPredicted RBP8.39□□□□□ -1.07
FOXN3-205ENST00000553904 DPP8Q6V1X1 898 aaPredicted RBP8.39□□□□□ -1.07
FOXN3-205ENST00000553904 CCDC191Q8NCU4 936 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 GRAPLQ8TC17 118 aaPredicted RBP8.39□□□□□ -1.07
FOXN3-205ENST00000553904 ISCA1Q9BUE6 129 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 TAF1DQ9H5J8 278 aaPredicted RBP8.39□□□□□ -1.07
FOXN3-205ENST00000553904 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
FOXN3-205ENST00000553904 GOLGB1Q14789 3259 aaKnown RBP8.39□□□□□ -1.07
FOXN3-205ENST00000553904 KDM3BQ7LBC6 1761 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 IRS4O14654 1257 aaPredicted RBP8.38□□□□□ -1.07
FOXN3-205ENST00000553904 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 WWC1Q8IX03 1113 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 ZBTB38Q8NAP3 1195 aaPredicted RBP8.38□□□□□ -1.07
FOXN3-205ENST00000553904 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 RTFDC1Q9BY42 306 aaPredicted RBP8.38□□□□□ -1.07
FOXN3-205ENST00000553904 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 ZNRF3Q9ULT6 936 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 GJA3Q9Y6H8 435 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 BCORQ6W2J9 1755 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 DLEC1Q9Y238 1755 aa8.38□□□□□ -1.07
FOXN3-205ENST00000553904 IL16Q14005 1332 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 G3V3G9 751 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 RPS8P62241 208 aaKnown RBP8.37□□□□□ -1.07
FOXN3-205ENST00000553904 DCAF8Q5TAQ9 597 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 USP50Q70EL3 339 aaPredicted RBP8.37□□□□□ -1.07
FOXN3-205ENST00000553904 WDR63Q8IWG1 891 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 C8orf58Q8NAV2 365 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 EYA3Q99504 573 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 METTL22Q9BUU2 404 aaPredicted RBP8.37□□□□□ -1.07
FOXN3-205ENST00000553904 NSFL1CQ9UNZ2 370 aaKnown RBP8.37□□□□□ -1.07
FOXN3-205ENST00000553904 LAMB4A4D0S4 1761 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 DLG5Q8TDM6 1919 aa8.37□□□□□ -1.07
FOXN3-205ENST00000553904 ABCC4O15439 1325 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 PDE8AO60658 829 aa8.36□□□□□ -1.07
FOXN3-205ENST00000553904 PCCAP05165 728 aaPredicted RBP8.36□□□□□ -1.07
FOXN3-205ENST00000553904 AOC3Q16853 763 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms