RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 PALD1Q9ULE6 856 aa12.97□□□□□ -0.33
TTC8-208ENST00000553718 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
TTC8-208ENST00000553718 A0A087WZG4 1122 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
TTC8-208ENST00000553718 PSMA5P28066 241 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 EVA1CP58658 441 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 NECTIN1Q15223 517 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 VPS53Q5VIR6 699 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 MAP4K1Q92918 833 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.33
TTC8-208ENST00000553718 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.33
TTC8-208ENST00000553718 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.33
TTC8-208ENST00000553718 ABCA3Q99758 1704 aa12.96□□□□□ -0.34
TTC8-208ENST00000553718 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 CIAO1O76071 339 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
TTC8-208ENST00000553718 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
TTC8-208ENST00000553718 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.95□□□□□ -0.34
TTC8-208ENST00000553718 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 SH2B1Q9NRF2 756 aaPredicted RBP12.95□□□□□ -0.34
TTC8-208ENST00000553718 LMBRD1Q9NUN5 540 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
TTC8-208ENST00000553718 JCADQ9P266 1359 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
TTC8-208ENST00000553718 ZNF335Q9H4Z2 1342 aaPredicted RBP12.94□□□□□ -0.34
TTC8-208ENST00000553718 UBAP1LF5GYI3 381 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 MBD3O95983 291 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 ZNF445P59923 1031 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 EPHA10Q5JZY3 1008 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
TTC8-208ENST00000553718 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 IL25Q9H293 177 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 ZDHHC9Q9Y397 364 aa12.94□□□□□ -0.34
TTC8-208ENST00000553718 LRP6O75581 1613 aa12.93□□□□□ -0.34
TTC8-208ENST00000553718 XRCC6P12956 609 aaKnown RBP eCLIP12.93□□□□□ -0.34
TTC8-208ENST00000553718 IL15P40933 162 aaPredicted RBP12.93□□□□□ -0.34
TTC8-208ENST00000553718 FOXO4P98177 505 aa12.93□□□□□ -0.34
TTC8-208ENST00000553718 KRT32Q14532 448 aa12.93□□□□□ -0.34
TTC8-208ENST00000553718 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
TTC8-208ENST00000553718 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
TTC8-208ENST00000553718 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
TTC8-208ENST00000553718 TCIRG1Q13488 830 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 HAUS7Q99871 368 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
TTC8-208ENST00000553718 GRPEL1Q9HAV7 217 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 TMOD3Q9NYL9 352 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 MED23Q9ULK4 1368 aa12.92□□□□□ -0.34
TTC8-208ENST00000553718 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
TTC8-208ENST00000553718 MCTP1Q6DN14 999 aa12.91□□□□□ -0.34
TTC8-208ENST00000553718 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
TTC8-208ENST00000553718 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
TTC8-208ENST00000553718 FSD1Q9BTV5 496 aa12.91□□□□□ -0.34
TTC8-208ENST00000553718 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
TTC8-208ENST00000553718 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
TTC8-208ENST00000553718 AFDNP55196 1824 aaKnown RBP12.9□□□□□ -0.34
TTC8-208ENST00000553718 STARD3NLO95772 234 aa12.9□□□□□ -0.34
TTC8-208ENST00000553718 PCCAP05165 728 aaPredicted RBP12.9□□□□□ -0.34
TTC8-208ENST00000553718 AK2P54819 239 aa12.9□□□□□ -0.34
TTC8-208ENST00000553718 NMIQ13287 307 aaPredicted RBP12.9□□□□□ -0.34
TTC8-208ENST00000553718 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
TTC8-208ENST00000553718 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
TTC8-208ENST00000553718 FAM43AQ8N2R8 423 aa12.9□□□□□ -0.34
TTC8-208ENST00000553718 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
TTC8-208ENST00000553718 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
TTC8-208ENST00000553718 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
TTC8-208ENST00000553718 NUP188Q5SRE5 1749 aa12.9□□□□□ -0.34
TTC8-208ENST00000553718 CDHR2Q9BYE9 1310 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 COL14A1Q05707 1796 aaKnown RBP12.89□□□□□ -0.35
TTC8-208ENST00000553718 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 EYA2O00167 538 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
TTC8-208ENST00000553718 PTH1RQ03431 593 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 TFCP2Q12800 502 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 UPF3BQ9BZI7 483 aaKnown RBP12.89□□□□□ -0.35
TTC8-208ENST00000553718 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 DBNLQ9UJU6 430 aaKnown RBP12.89□□□□□ -0.35
TTC8-208ENST00000553718 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
TTC8-208ENST00000553718 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 ABCC12Q96J65 1359 aa12.89□□□□□ -0.35
TTC8-208ENST00000553718 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
TTC8-208ENST00000553718 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
TTC8-208ENST00000553718 COL22A1Q8NFW1 1626 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms