RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 KNSTRNQ9Y448 316 aa13.04□□□□□ -0.32
CHD8-205ENST00000553651 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
CHD8-205ENST00000553651 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
CHD8-205ENST00000553651 DGKZQ13574 1117 aa13.03□□□□□ -0.32
CHD8-205ENST00000553651 HLFQ16534 295 aa13.03□□□□□ -0.32
CHD8-205ENST00000553651 ZIC5Q96T25 663 aa13.03□□□□□ -0.32
CHD8-205ENST00000553651 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
CHD8-205ENST00000553651 ZNF652Q9Y2D9 606 aa13.03□□□□□ -0.32
CHD8-205ENST00000553651 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
CHD8-205ENST00000553651 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
CHD8-205ENST00000553651 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
CHD8-205ENST00000553651 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
CHD8-205ENST00000553651 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
CHD8-205ENST00000553651 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
CHD8-205ENST00000553651 BTBD11A6QL63 1104 aa13.01□□□□□ -0.33
CHD8-205ENST00000553651 CELF2O95319 508 aaKnown RBP13.01□□□□□ -0.33
CHD8-205ENST00000553651 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
CHD8-205ENST00000553651 CIAPIN1Q6FI81 312 aa13.01□□□□□ -0.33
CHD8-205ENST00000553651 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
CHD8-205ENST00000553651 GPRC5DQ9NZD1 345 aa13.01□□□□□ -0.33
CHD8-205ENST00000553651 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
CHD8-205ENST00000553651 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
CHD8-205ENST00000553651 GLIS2Q9BZE0 524 aaPredicted RBP13□□□□□ -0.33
CHD8-205ENST00000553651 ADARB2Q9NS39 739 aaKnown RBP13□□□□□ -0.33
CHD8-205ENST00000553651 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
CHD8-205ENST00000553651 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
CHD8-205ENST00000553651 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
CHD8-205ENST00000553651 HIRAP54198 1017 aaPredicted RBP12.99□□□□□ -0.33
CHD8-205ENST00000553651 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
CHD8-205ENST00000553651 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
CHD8-205ENST00000553651 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
CHD8-205ENST00000553651 CXCL9Q07325 125 aa12.98□□□□□ -0.33
CHD8-205ENST00000553651 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
CHD8-205ENST00000553651 NUP98P52948 1817 aa12.97□□□□□ -0.33
CHD8-205ENST00000553651 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
CHD8-205ENST00000553651 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
CHD8-205ENST00000553651 CRAMP1Q96RY5 1269 aa12.97□□□□□ -0.33
CHD8-205ENST00000553651 IBTKQ9P2D0 1353 aaPredicted RBP12.96□□□□□ -0.33
CHD8-205ENST00000553651 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
CHD8-205ENST00000553651 FAM155AB1AL88 458 aaPredicted RBP12.96□□□□□ -0.33
CHD8-205ENST00000553651 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.33
CHD8-205ENST00000553651 SOX10P56693 466 aa12.96□□□□□ -0.33
CHD8-205ENST00000553651 NOGQ13253 232 aa12.96□□□□□ -0.33
CHD8-205ENST00000553651 AOC3Q16853 763 aa12.96□□□□□ -0.33
CHD8-205ENST00000553651 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.33
CHD8-205ENST00000553651 LAMB4A4D0S4 1761 aa12.95□□□□□ -0.34
CHD8-205ENST00000553651 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
CHD8-205ENST00000553651 U2SURPO15042 1029 aaKnown RBP12.95□□□□□ -0.34
CHD8-205ENST00000553651 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
CHD8-205ENST00000553651 PRPF38BQ5VTL8 546 aaKnown RBP12.95□□□□□ -0.34
CHD8-205ENST00000553651 DLK2Q6UY11 383 aa12.95□□□□□ -0.34
CHD8-205ENST00000553651 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
CHD8-205ENST00000553651 RTFDC1Q9BY42 306 aaPredicted RBP12.95□□□□□ -0.34
CHD8-205ENST00000553651 NYXQ9GZU5 481 aa12.95□□□□□ -0.34
CHD8-205ENST00000553651 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
CHD8-205ENST00000553651 VPS33BQ9H267 617 aa12.95□□□□□ -0.34
CHD8-205ENST00000553651 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
CHD8-205ENST00000553651 ERVV-1B6SEH8 477 aa12.94□□□□□ -0.34
CHD8-205ENST00000553651 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
CHD8-205ENST00000553651 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
CHD8-205ENST00000553651 RPGRQ92834 1020 aaKnown RBP12.94□□□□□ -0.34
CHD8-205ENST00000553651 ZNRF3Q9ULT6 936 aa12.94□□□□□ -0.34
CHD8-205ENST00000553651 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 NTSR2O95665 410 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
CHD8-205ENST00000553651 TTLL7Q6ZT98 887 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 MCM10Q7L590 875 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 ZNF408Q9H9D4 720 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
CHD8-205ENST00000553651 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
CHD8-205ENST00000553651 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
CHD8-205ENST00000553651 HUNKP57058 714 aa12.92□□□□□ -0.34
CHD8-205ENST00000553651 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
CHD8-205ENST00000553651 RBM17Q96I25 401 aaKnown RBP12.92□□□□□ -0.34
CHD8-205ENST00000553651 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
CHD8-205ENST00000553651 GPTP24298 496 aa12.91□□□□□ -0.34
CHD8-205ENST00000553651 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
CHD8-205ENST00000553651 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
CHD8-205ENST00000553651 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
CHD8-205ENST00000553651 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.34
CHD8-205ENST00000553651 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.34
CHD8-205ENST00000553651 RAD17O75943 681 aa12.9□□□□□ -0.34
CHD8-205ENST00000553651 KIF23Q02241 960 aaPredicted RBP12.9□□□□□ -0.34
CHD8-205ENST00000553651 KIAA2012Q0VF49 1180 aa12.9□□□□□ -0.34
CHD8-205ENST00000553651 RGMBQ6NW40 437 aa12.9□□□□□ -0.34
CHD8-205ENST00000553651 ABCC4O15439 1325 aa12.89□□□□□ -0.35
CHD8-205ENST00000553651 SLC10A5Q5PT55 438 aa12.89□□□□□ -0.35
CHD8-205ENST00000553651 NGEFQ8N5V2 710 aa12.89□□□□□ -0.35
CHD8-205ENST00000553651 CNOT7Q9UIV1 285 aaKnown RBP12.89□□□□□ -0.35
CHD8-205ENST00000553651 LAMB2P55268 1798 aa12.89□□□□□ -0.35
CHD8-205ENST00000553651 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
CHD8-205ENST00000553651 AKAP11Q9UKA4 1901 aa12.88□□□□□ -0.35
CHD8-205ENST00000553651 TRPA1O75762 1119 aa12.88□□□□□ -0.35
CHD8-205ENST00000553651 EGFRP00533 1210 aa12.88□□□□□ -0.35
CHD8-205ENST00000553651 SUPT20HQ8NEM7 779 aa12.88□□□□□ -0.35
CHD8-205ENST00000553651 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
CHD8-205ENST00000553651 CLSPNQ9HAW4 1339 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms