RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 NPHP1O15259 732 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 CLEC4GQ6UXB4 293 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 NLRP10Q86W26 655 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 CCDC191Q8NCU4 936 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
CHD8-204ENST00000553622 LAMB2P55268 1798 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 GNAI2P04899 355 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 NBPF7P0C2Y1 421 aaPredicted RBP12.25□□□□□ -0.45
CHD8-204ENST00000553622 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
CHD8-204ENST00000553622 LRRFIP2Q9Y608 721 aaKnown RBP12.25□□□□□ -0.45
CHD8-204ENST00000553622 UBN2Q6ZU65 1347 aa12.25□□□□□ -0.45
CHD8-204ENST00000553622 DDX60Q8IY21 1712 aaKnown RBP12.25□□□□□ -0.45
CHD8-204ENST00000553622 GYS1P13807 737 aa12.24□□□□□ -0.45
CHD8-204ENST00000553622 GTF2E1P29083 439 aaPredicted RBP12.24□□□□□ -0.45
CHD8-204ENST00000553622 PARP10Q53GL7 1025 aa12.24□□□□□ -0.45
CHD8-204ENST00000553622 SUSD4Q5VX71 490 aa12.24□□□□□ -0.45
CHD8-204ENST00000553622 PPP1R42Q7Z4L9 355 aa12.24□□□□□ -0.45
CHD8-204ENST00000553622 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
CHD8-204ENST00000553622 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
CHD8-204ENST00000553622 PPP4R2Q9NY27 417 aa12.24□□□□□ -0.45
CHD8-204ENST00000553622 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
CHD8-204ENST00000553622 TRIM28Q13263 835 aaKnown RBP12.23□□□□□ -0.45
CHD8-204ENST00000553622 AAMPQ13685 434 aa12.23□□□□□ -0.45
CHD8-204ENST00000553622 NFIXQ14938 502 aa12.23□□□□□ -0.45
CHD8-204ENST00000553622 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
CHD8-204ENST00000553622 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
CHD8-204ENST00000553622 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
CHD8-204ENST00000553622 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
CHD8-204ENST00000553622 CARMIL3Q8ND23 1372 aa12.22□□□□□ -0.45
CHD8-204ENST00000553622 H7C1W4 665 aa12.22□□□□□ -0.45
CHD8-204ENST00000553622 RGL2O15211 777 aa12.22□□□□□ -0.45
CHD8-204ENST00000553622 PCCAP05165 728 aaPredicted RBP12.22□□□□□ -0.45
CHD8-204ENST00000553622 NUTM1Q86Y26 1132 aa12.22□□□□□ -0.45
CHD8-204ENST00000553622 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
CHD8-204ENST00000553622 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
CHD8-204ENST00000553622 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
CHD8-204ENST00000553622 PCDHB15Q9Y5E8 787 aa12.22□□□□□ -0.45
CHD8-204ENST00000553622 TAF1P21675 1872 aa12.21□□□□□ -0.45
CHD8-204ENST00000553622 UTYO14607 1347 aa12.21□□□□□ -0.45
CHD8-204ENST00000553622 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
CHD8-204ENST00000553622 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
CHD8-204ENST00000553622 NLGN1Q8N2Q7 840 aa12.21□□□□□ -0.45
CHD8-204ENST00000553622 PDGFDQ9GZP0 370 aaPredicted RBP12.21□□□□□ -0.45
CHD8-204ENST00000553622 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
CHD8-204ENST00000553622 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
CHD8-204ENST00000553622 PSDA5PKW4 1024 aaPredicted RBP12.2□□□□□ -0.46
CHD8-204ENST00000553622 IRS4O14654 1257 aaPredicted RBP12.2□□□□□ -0.46
CHD8-204ENST00000553622 NTSR2O95665 410 aa12.2□□□□□ -0.46
CHD8-204ENST00000553622 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
CHD8-204ENST00000553622 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
CHD8-204ENST00000553622 CEP85Q6P2H3 762 aa12.2□□□□□ -0.46
CHD8-204ENST00000553622 CCDC24Q8N4L8 307 aa12.2□□□□□ -0.46
CHD8-204ENST00000553622 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
CHD8-204ENST00000553622 CACNA1SQ13698 1873 aa12.2□□□□□ -0.46
CHD8-204ENST00000553622 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
CHD8-204ENST00000553622 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
CHD8-204ENST00000553622 MMP10P09238 476 aa12.19□□□□□ -0.46
CHD8-204ENST00000553622 CASP7P55210 303 aa12.19□□□□□ -0.46
CHD8-204ENST00000553622 EPHA10Q5JZY3 1008 aa12.19□□□□□ -0.46
CHD8-204ENST00000553622 TPTE2Q6XPS3 522 aa12.19□□□□□ -0.46
CHD8-204ENST00000553622 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
CHD8-204ENST00000553622 RWDD1Q9H446 243 aaPredicted RBP12.19□□□□□ -0.46
CHD8-204ENST00000553622 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
CHD8-204ENST00000553622 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
CHD8-204ENST00000553622 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
CHD8-204ENST00000553622 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 HMMRO75330 724 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 SERPINB2P05120 415 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
CHD8-204ENST00000553622 ST5P78524 1137 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 DDR1Q08345 913 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 RPAP2Q8IXW5 612 aaPredicted RBP12.18□□□□□ -0.46
CHD8-204ENST00000553622 ANKRD44Q8N8A2 993 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 ABCC12Q96J65 1359 aa12.18□□□□□ -0.46
CHD8-204ENST00000553622 NRXN2Q9P2S2 1712 aa12.17□□□□□ -0.46
CHD8-204ENST00000553622 POLRMTO00411 1230 aaKnown RBP12.17□□□□□ -0.46
CHD8-204ENST00000553622 PDE8AO60658 829 aa12.17□□□□□ -0.46
CHD8-204ENST00000553622 TM4SF1P30408 202 aa12.17□□□□□ -0.46
CHD8-204ENST00000553622 ATP8B2P98198 1209 aa12.17□□□□□ -0.46
CHD8-204ENST00000553622 LMBR1LQ6UX01 489 aa12.17□□□□□ -0.46
CHD8-204ENST00000553622 KAZALD1Q96I82 304 aa12.17□□□□□ -0.46
CHD8-204ENST00000553622 BCL11AQ9H165 835 aa12.17□□□□□ -0.46
CHD8-204ENST00000553622 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
CHD8-204ENST00000553622 IGHDP01880 384 aa12.16□□□□□ -0.46
CHD8-204ENST00000553622 CTSWP56202 376 aa12.16□□□□□ -0.46
CHD8-204ENST00000553622 FOXO4P98177 505 aa12.16□□□□□ -0.46
CHD8-204ENST00000553622 SIRT2Q8IXJ6 389 aa12.16□□□□□ -0.46
CHD8-204ENST00000553622 SLC16A10Q8TF71 515 aa12.16□□□□□ -0.46
CHD8-204ENST00000553622 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
CHD8-204ENST00000553622 APBB1O00213 710 aa12.15□□□□□ -0.46
CHD8-204ENST00000553622 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms