RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 PARP3Q9Y6F1 533 aa24.43■■□□□ 1.5
PSEN1-207ENST00000553599 AFDNP55196 1824 aaKnown RBP24.42■■□□□ 1.5
PSEN1-207ENST00000553599 POLRMTO00411 1230 aaKnown RBP24.42■■□□□ 1.5
PSEN1-207ENST00000553599 POLD1P28340 1107 aa24.42■■□□□ 1.5
PSEN1-207ENST00000553599 TPTE2Q6XPS3 522 aa24.42■■□□□ 1.5
PSEN1-207ENST00000553599 UTP14AQ9BVJ6 771 aaKnown RBP24.42■■□□□ 1.5
PSEN1-207ENST00000553599 TNNQ9UQP3 1299 aa24.42■■□□□ 1.5
PSEN1-207ENST00000553599 RLBP1P12271 317 aa24.41■■□□□ 1.5
PSEN1-207ENST00000553599 DDR1Q08345 913 aa24.41■■□□□ 1.5
PSEN1-207ENST00000553599 SUSD4Q5VX71 490 aa24.41■■□□□ 1.5
PSEN1-207ENST00000553599 NBPF5PQ86XG9 351 aaPredicted RBP24.41■■□□□ 1.5
PSEN1-207ENST00000553599 TMEM57Q8N5G2 664 aa24.41■■□□□ 1.5
PSEN1-207ENST00000553599 SERPINB2P05120 415 aa24.4■■□□□ 1.5
PSEN1-207ENST00000553599 HSP90B1P14625 803 aaKnown RBP24.4■■□□□ 1.5
PSEN1-207ENST00000553599 ZBTB38Q8NAP3 1195 aaPredicted RBP24.4■■□□□ 1.5
PSEN1-207ENST00000553599 PANK1Q8TE04 598 aa24.4■■□□□ 1.5
PSEN1-207ENST00000553599 CHMP4BQ9H444 224 aaKnown RBP24.4■■□□□ 1.5
PSEN1-207ENST00000553599 NTSR2O95665 410 aa24.39■■□□□ 1.49
PSEN1-207ENST00000553599 PCCAP05165 728 aaPredicted RBP24.39■■□□□ 1.49
PSEN1-207ENST00000553599 SPON1Q9HCB6 807 aa24.39■■□□□ 1.49
PSEN1-207ENST00000553599 TRMT112Q9UI30 125 aaKnown RBP24.39■■□□□ 1.49
PSEN1-207ENST00000553599 NRXN2Q9P2S2 1712 aa24.38■■□□□ 1.49
PSEN1-207ENST00000553599 SH3TC1Q8TE82 1336 aa24.38■■□□□ 1.49
PSEN1-207ENST00000553599 MVPQ14764 893 aaKnown RBP24.38■■□□□ 1.49
PSEN1-207ENST00000553599 ITPRIPQ8IWB1 547 aa24.38■■□□□ 1.49
PSEN1-207ENST00000553599 CNBD1Q8NA66 436 aa24.38■■□□□ 1.49
PSEN1-207ENST00000553599 C9orf78Q9NZ63 289 aaPredicted RBP24.38■■□□□ 1.49
PSEN1-207ENST00000553599 HDAC5Q9UQL6 1122 aa24.38■■□□□ 1.49
PSEN1-207ENST00000553599 ATF5Q9Y2D1 282 aaPredicted RBP24.38■■□□□ 1.49
PSEN1-207ENST00000553599 UTYO14607 1347 aa24.37■■□□□ 1.49
PSEN1-207ENST00000553599 H7C1W4 665 aa24.37■■□□□ 1.49
PSEN1-207ENST00000553599 GRM8O00222 908 aa24.37■■□□□ 1.49
PSEN1-207ENST00000553599 GTF2E1P29083 439 aaPredicted RBP24.37■■□□□ 1.49
PSEN1-207ENST00000553599 DDX19BQ9UMR2 479 aa24.37■■□□□ 1.49
PSEN1-207ENST00000553599 CDHR2Q9BYE9 1310 aa24.36■■□□□ 1.49
PSEN1-207ENST00000553599 NPHP1O15259 732 aa24.36■■□□□ 1.49
PSEN1-207ENST00000553599 C20orf194Q5TEA3 1177 aa24.36■■□□□ 1.49
PSEN1-207ENST00000553599 SGIP1Q9BQI5 828 aa24.36■■□□□ 1.49
PSEN1-207ENST00000553599 USP44Q9H0E7 712 aa24.36■■□□□ 1.49
PSEN1-207ENST00000553599 GNAI3P08754 354 aa24.35■■□□□ 1.49
PSEN1-207ENST00000553599 ST5P78524 1137 aa24.35■■□□□ 1.49
PSEN1-207ENST00000553599 RIC1Q4ADV7 1423 aa24.35■■□□□ 1.49
PSEN1-207ENST00000553599 FAM177BA6PVY3 158 aa24.34■■□□□ 1.49
PSEN1-207ENST00000553599 SLC10A5Q5PT55 438 aa24.34■■□□□ 1.49
PSEN1-207ENST00000553599 PRR5LQ6MZQ0 368 aa24.34■■□□□ 1.49
PSEN1-207ENST00000553599 COG6Q9Y2V7 657 aa24.34■■□□□ 1.49
PSEN1-207ENST00000553599 PTGER2P43116 358 aa24.33■■□□□ 1.49
PSEN1-207ENST00000553599 UBE3BQ7Z3V4 1068 aa24.33■■□□□ 1.49
PSEN1-207ENST00000553599 FAM89AQ96GI7 184 aa24.33■■□□□ 1.49
PSEN1-207ENST00000553599 ZBTB7BO15156 539 aaPredicted RBP24.32■■□□□ 1.48
PSEN1-207ENST00000553599 CASP7P55210 303 aa24.32■■□□□ 1.48
PSEN1-207ENST00000553599 NBPF7P0C2Y1 421 aaPredicted RBP24.31■■□□□ 1.48
PSEN1-207ENST00000553599 UBTFL1P0CB47 393 aaPredicted RBP24.31■■□□□ 1.48
PSEN1-207ENST00000553599 ERFEQ4G0M1 354 aa24.31■■□□□ 1.48
PSEN1-207ENST00000553599 PLA2G12BQ9BX93 195 aa24.31■■□□□ 1.48
PSEN1-207ENST00000553599 IRS4O14654 1257 aaPredicted RBP24.3■■□□□ 1.48
PSEN1-207ENST00000553599 AAMPQ13685 434 aa24.3■■□□□ 1.48
PSEN1-207ENST00000553599 NUTM1Q86Y26 1132 aa24.3■■□□□ 1.48
PSEN1-207ENST00000553599 MEIS3Q99687 375 aa24.3■■□□□ 1.48
PSEN1-207ENST00000553599 BRIP1Q9BX63 1249 aa24.3■■□□□ 1.48
PSEN1-207ENST00000553599 PDZRN3Q9UPQ7 1066 aa24.29■■□□□ 1.48
PSEN1-207ENST00000553599 LAMB2P55268 1798 aa24.29■■□□□ 1.48
PSEN1-207ENST00000553599 PDE8AO60658 829 aa24.28■■□□□ 1.48
PSEN1-207ENST00000553599 C10orf71Q711Q0 1435 aa24.27■■□□□ 1.48
PSEN1-207ENST00000553599 PDE6BP35913 854 aa24.27■■□□□ 1.48
PSEN1-207ENST00000553599 NLRP3Q96P20 1036 aa24.27■■□□□ 1.48
PSEN1-207ENST00000553599 ABCC12Q96J65 1359 aa24.27■■□□□ 1.48
PSEN1-207ENST00000553599 KLRG2A4D1S0 409 aaPredicted RBP24.26■■□□□ 1.47
PSEN1-207ENST00000553599 GNAI2P04899 355 aa24.26■■□□□ 1.47
PSEN1-207ENST00000553599 RTL5Q5HYW3 569 aaPredicted RBP24.26■■□□□ 1.47
PSEN1-207ENST00000553599 SYNE4Q8N205 404 aa24.26■■□□□ 1.47
PSEN1-207ENST00000553599 ZBTB40Q9NUA8 1239 aa24.26■■□□□ 1.47
PSEN1-207ENST00000553599 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
PSEN1-207ENST00000553599 HCLS1P14317 486 aaPredicted RBP24.25■■□□□ 1.47
PSEN1-207ENST00000553599 JARID2Q92833 1246 aaPredicted RBP24.25■■□□□ 1.47
PSEN1-207ENST00000553599 CRBNQ96SW2 442 aa24.25■■□□□ 1.47
PSEN1-207ENST00000553599 CD2APQ9Y5K6 639 aa24.25■■□□□ 1.47
PSEN1-207ENST00000553599 KIF13BQ9NQT8 1826 aa24.24■■□□□ 1.47
PSEN1-207ENST00000553599 NEFLP07196 543 aa24.23■■□□□ 1.47
PSEN1-207ENST00000553599 SF3B3Q15393 1217 aaKnown RBP24.23■■□□□ 1.47
PSEN1-207ENST00000553599 SUCLG2Q96I99 432 aa24.23■■□□□ 1.47
PSEN1-207ENST00000553599 CTSWP56202 376 aa24.22■■□□□ 1.47
PSEN1-207ENST00000553599 RABL6Q3YEC7 729 aaPredicted RBP24.22■■□□□ 1.47
PSEN1-207ENST00000553599 CRY2Q49AN0 593 aa24.22■■□□□ 1.47
PSEN1-207ENST00000553599 KAZALD1Q96I82 304 aa24.22■■□□□ 1.47
PSEN1-207ENST00000553599 LRRFIP2Q9Y608 721 aaKnown RBP24.22■■□□□ 1.47
PSEN1-207ENST00000553599 MYH3P11055 1940 aa24.22■■□□□ 1.47
PSEN1-207ENST00000553599 ANKRD31Q8N7Z5 1873 aa24.21■■□□□ 1.47
PSEN1-207ENST00000553599 LRP5O75197 1615 aa24.21■■□□□ 1.47
PSEN1-207ENST00000553599 CSF1RP07333 972 aa24.21■■□□□ 1.47
PSEN1-207ENST00000553599 TGFB2P61812 414 aa24.21■■□□□ 1.47
PSEN1-207ENST00000553599 FOXO4P98177 505 aa24.21■■□□□ 1.47
PSEN1-207ENST00000553599 CCDC152Q4G0S7 254 aa24.21■■□□□ 1.47
PSEN1-207ENST00000553599 CCDC24Q8N4L8 307 aa24.21■■□□□ 1.47
PSEN1-207ENST00000553599 RTL9Q8NET4 1388 aa24.2■■□□□ 1.46
PSEN1-207ENST00000553599 TTLL11Q8NHH1 800 aa24.2■■□□□ 1.46
PSEN1-207ENST00000553599 TNRC6CQ9HCJ0 1690 aaKnown RBP24.19■■□□□ 1.46
PSEN1-207ENST00000553599 MTX1Q13505 466 aa24.19■■□□□ 1.46
PSEN1-207ENST00000553599 BICC1Q9H694 974 aaKnown RBP24.19■■□□□ 1.46
PSEN1-207ENST00000553599 PPP1R1BQ9UD71 204 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms