RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 METTL22Q9BUU2 404 aaPredicted RBP13□□□□□ -0.33
CALCOCO1-222ENST00000553154 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 ST5P78524 1137 aa12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 MRPL50Q8N5N7 158 aaKnown RBP12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 NYXQ9GZU5 481 aa12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
CALCOCO1-222ENST00000553154 ARFGEF1Q9Y6D6 1849 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 PDE6BP35913 854 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 C2CD5Q86YS7 1000 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 SYNE4Q8N205 404 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 UTP14AQ9BVJ6 771 aaKnown RBP12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 LAMB2P55268 1798 aa12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 DDX60Q8IY21 1712 aaKnown RBP12.98□□□□□ -0.33
CALCOCO1-222ENST00000553154 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
CALCOCO1-222ENST00000553154 HOXA10P31260 410 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO1-222ENST00000553154 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
CALCOCO1-222ENST00000553154 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
CALCOCO1-222ENST00000553154 RIC3Q7Z5B4 369 aa12.97□□□□□ -0.33
CALCOCO1-222ENST00000553154 PIM2Q9P1W9 311 aa12.97□□□□□ -0.33
CALCOCO1-222ENST00000553154 COL4A1P02462 1669 aa12.96□□□□□ -0.33
CALCOCO1-222ENST00000553154 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
CALCOCO1-222ENST00000553154 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
CALCOCO1-222ENST00000553154 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
CALCOCO1-222ENST00000553154 C7orf43Q8WVR3 580 aa12.96□□□□□ -0.33
CALCOCO1-222ENST00000553154 MYD88Q99836 296 aa12.96□□□□□ -0.33
CALCOCO1-222ENST00000553154 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
CALCOCO1-222ENST00000553154 NEURL1BA8MQ27 555 aa12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 H0YIN7 160 aa12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 CASP7P55210 303 aa12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 GPR162Q16538 588 aa12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 DALRD3Q5D0E6 543 aaKnown RBP12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 WWC3Q9ULE0 1092 aa12.95□□□□□ -0.34
CALCOCO1-222ENST00000553154 CDHR2Q9BYE9 1310 aa12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 NPR1P16066 1061 aa12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 RARSP54136 660 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 FKBP5Q13451 457 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 CWF19L2Q2TBE0 894 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 TTLL6Q8N841 843 aa12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 ZBTB38Q8NAP3 1195 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 LINS1Q8NG48 757 aa12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 MASTLQ96GX5 879 aa12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 BCS1LQ9Y276 419 aa12.94□□□□□ -0.34
CALCOCO1-222ENST00000553154 F6X3S4 739 aa12.93□□□□□ -0.34
CALCOCO1-222ENST00000553154 H7C1W4 665 aa12.93□□□□□ -0.34
CALCOCO1-222ENST00000553154 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-222ENST00000553154 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
CALCOCO1-222ENST00000553154 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO1-222ENST00000553154 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 PTPRCP08575 1304 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 PRELPP51888 382 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 GCKRQ14397 625 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 SF3B3Q15393 1217 aaKnown RBP12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 SLC51AQ86UW1 340 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 CNKSR1Q969H4 720 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 CRAMP1Q96RY5 1269 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 BCL2L13Q9BXK5 485 aa12.92□□□□□ -0.34
CALCOCO1-222ENST00000553154 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
CALCOCO1-222ENST00000553154 NFKBIEO00221 500 aa12.91□□□□□ -0.34
CALCOCO1-222ENST00000553154 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-222ENST00000553154 UTYO14607 1347 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 ABCC4O15439 1325 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 LTBP3Q9NS15 1303 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 NPHP1O15259 732 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 NLRP3Q96P20 1036 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 PLA2G12BQ9BX93 195 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 SMC4Q9NTJ3 1288 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 RTL9Q8NET4 1388 aa12.9□□□□□ -0.34
CALCOCO1-222ENST00000553154 ALDH1L1O75891 902 aa12.89□□□□□ -0.35
CALCOCO1-222ENST00000553154 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
CALCOCO1-222ENST00000553154 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
CALCOCO1-222ENST00000553154 DUOX1Q9NRD9 1551 aa12.89□□□□□ -0.35
CALCOCO1-222ENST00000553154 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
CALCOCO1-222ENST00000553154 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
CALCOCO1-222ENST00000553154 C21orf2O43822 256 aa12.88□□□□□ -0.35
CALCOCO1-222ENST00000553154 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
CALCOCO1-222ENST00000553154 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-222ENST00000553154 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
CALCOCO1-222ENST00000553154 PDE8AO60658 829 aa12.87□□□□□ -0.35
CALCOCO1-222ENST00000553154 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
CALCOCO1-222ENST00000553154 RASSF7Q02833 373 aa12.87□□□□□ -0.35
CALCOCO1-222ENST00000553154 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO1-222ENST00000553154 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
CALCOCO1-222ENST00000553154 ARHGAP45Q92619 1136 aa12.87□□□□□ -0.35
CALCOCO1-222ENST00000553154 RPGRQ92834 1020 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms