RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MAP3K2Q9Y2U5 619 aa12.24□□□□□ -0.45
TMEM116-216ENST00000552800 RAB11FIP3O75154 756 aa12.23□□□□□ -0.45
TMEM116-216ENST00000552800 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
TMEM116-216ENST00000552800 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
TMEM116-216ENST00000552800 PLCG2P16885 1265 aa12.23□□□□□ -0.45
TMEM116-216ENST00000552800 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
TMEM116-216ENST00000552800 COPS6Q7L5N1 327 aa12.23□□□□□ -0.45
TMEM116-216ENST00000552800 NECTIN2Q92692 538 aa12.23□□□□□ -0.45
TMEM116-216ENST00000552800 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
TMEM116-216ENST00000552800 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
TMEM116-216ENST00000552800 SALL3Q9BXA9 1300 aa12.22□□□□□ -0.45
TMEM116-216ENST00000552800 EIF5BO60841 1220 aaKnown RBP12.22□□□□□ -0.45
TMEM116-216ENST00000552800 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
TMEM116-216ENST00000552800 DDB1Q16531 1140 aa12.22□□□□□ -0.45
TMEM116-216ENST00000552800 ANKRD45Q5TZF3 282 aa12.22□□□□□ -0.45
TMEM116-216ENST00000552800 C1orf115Q9H7X2 142 aa12.22□□□□□ -0.45
TMEM116-216ENST00000552800 NEURL1BA8MQ27 555 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 GRM8O00222 908 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 ADAMTS2O95450 1211 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-216ENST00000552800 RGS3P49796 1198 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 GCKRQ14397 625 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 PLEKHM2Q8IWE5 1019 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-216ENST00000552800 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 STAP2Q9UGK3 403 aa12.21□□□□□ -0.45
TMEM116-216ENST00000552800 STARD3NLO95772 234 aa12.2□□□□□ -0.46
TMEM116-216ENST00000552800 ANXA1P04083 346 aa12.2□□□□□ -0.46
TMEM116-216ENST00000552800 CASP7P55210 303 aa12.2□□□□□ -0.46
TMEM116-216ENST00000552800 RABL6Q3YEC7 729 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-216ENST00000552800 HSP90AB4PQ58FF6 505 aa12.2□□□□□ -0.46
TMEM116-216ENST00000552800 KAZALD1Q96I82 304 aa12.2□□□□□ -0.46
TMEM116-216ENST00000552800 ASAP1Q9ULH1 1129 aa12.2□□□□□ -0.46
TMEM116-216ENST00000552800 LRRFIP2Q9Y608 721 aaKnown RBP12.2□□□□□ -0.46
TMEM116-216ENST00000552800 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 H7C1W4 665 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 NEXNQ0ZGT2 675 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 RIC3Q7Z5B4 369 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
TMEM116-216ENST00000552800 CCDC191Q8NCU4 936 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 USP35Q9P2H5 1018 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 NUP188Q5SRE5 1749 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 RREB1Q92766 1687 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
TMEM116-216ENST00000552800 ARFGEF2Q9Y6D5 1785 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 AOX1Q06278 1338 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 ERVV-1B6SEH8 477 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 CYP19A1P11511 503 aaPredicted RBP12.18□□□□□ -0.46
TMEM116-216ENST00000552800 PPP1R42Q7Z4L9 355 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
TMEM116-216ENST00000552800 NGLY1Q96IV0 654 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 ISCA1Q9BUE6 129 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
TMEM116-216ENST00000552800 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
TMEM116-216ENST00000552800 IL6STP40189 918 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-216ENST00000552800 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-216ENST00000552800 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-216ENST00000552800 PPP1R37O75864 691 aa12.16□□□□□ -0.46
TMEM116-216ENST00000552800 A1BGP04217 495 aa12.16□□□□□ -0.46
TMEM116-216ENST00000552800 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
TMEM116-216ENST00000552800 TCIRG1Q13488 830 aa12.16□□□□□ -0.46
TMEM116-216ENST00000552800 DPY19L2Q6NUT2 758 aa12.16□□□□□ -0.46
TMEM116-216ENST00000552800 PLA2G12BQ9BX93 195 aa12.16□□□□□ -0.46
TMEM116-216ENST00000552800 LRRCC1Q9C099 1032 aa12.16□□□□□ -0.46
TMEM116-216ENST00000552800 COPRSQ9NQ92 184 aa12.16□□□□□ -0.46
TMEM116-216ENST00000552800 ATRNO75882 1429 aa12.15□□□□□ -0.46
TMEM116-216ENST00000552800 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-216ENST00000552800 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-216ENST00000552800 EPB41L2O43491 1005 aaKnown RBP12.15□□□□□ -0.46
TMEM116-216ENST00000552800 MYL6BP14649 208 aa12.15□□□□□ -0.46
TMEM116-216ENST00000552800 CWF19L2Q2TBE0 894 aaKnown RBP12.15□□□□□ -0.46
TMEM116-216ENST00000552800 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
TMEM116-216ENST00000552800 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-216ENST00000552800 KIF1BPQ96EK5 621 aa12.15□□□□□ -0.46
TMEM116-216ENST00000552800 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-216ENST00000552800 TJP1Q07157 1748 aa12.14□□□□□ -0.47
TMEM116-216ENST00000552800 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
TMEM116-216ENST00000552800 PTCD1O75127 700 aaKnown RBP12.14□□□□□ -0.47
TMEM116-216ENST00000552800 EIF5P55010 431 aaKnown RBP12.14□□□□□ -0.47
TMEM116-216ENST00000552800 TTC22Q5TAA0 569 aa12.14□□□□□ -0.47
TMEM116-216ENST00000552800 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
TMEM116-216ENST00000552800 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
TMEM116-216ENST00000552800 DNAJC10Q8IXB1 793 aa12.14□□□□□ -0.47
TMEM116-216ENST00000552800 USP21Q9UK80 565 aa12.14□□□□□ -0.47
TMEM116-216ENST00000552800 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
TMEM116-216ENST00000552800 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 HSPA1LP34931 641 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 RFX5P48382 616 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-216ENST00000552800 PDE1AP54750 535 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 AIMP1Q12904 312 aaKnown RBP12.13□□□□□ -0.47
TMEM116-216ENST00000552800 HSP90AB3PQ58FF7 597 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 SUCLG2Q96I99 432 aa12.13□□□□□ -0.47
TMEM116-216ENST00000552800 IPO9Q96P70 1041 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms