RNA–Protein interactions for RNA: ENST00000552668.1

KRT4-205, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-205ENST00000552668 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
KRT4-205ENST00000552668 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
KRT4-205ENST00000552668 GPRC5DQ9NZD1 345 aa13.73□□□□□ -0.21
KRT4-205ENST00000552668 ALDH1B1P30837 517 aa13.72□□□□□ -0.21
KRT4-205ENST00000552668 HIRAP54198 1017 aaPredicted RBP13.72□□□□□ -0.21
KRT4-205ENST00000552668 HLFQ16534 295 aa13.72□□□□□ -0.21
KRT4-205ENST00000552668 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
KRT4-205ENST00000552668 DLK2Q6UY11 383 aa13.72□□□□□ -0.21
KRT4-205ENST00000552668 NIP7Q9Y221 180 aaKnown RBP eCLIP13.72□□□□□ -0.21
KRT4-205ENST00000552668 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
KRT4-205ENST00000552668 HOXA10P31260 410 aaPredicted RBP13.71□□□□□ -0.21
KRT4-205ENST00000552668 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
KRT4-205ENST00000552668 FAM155AB1AL88 458 aaPredicted RBP13.7□□□□□ -0.22
KRT4-205ENST00000552668 RGL2O15211 777 aa13.7□□□□□ -0.22
KRT4-205ENST00000552668 TEFQ10587 303 aa13.7□□□□□ -0.22
KRT4-205ENST00000552668 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
KRT4-205ENST00000552668 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
KRT4-205ENST00000552668 GNAT3A8MTJ3 354 aa13.69□□□□□ -0.22
KRT4-205ENST00000552668 CXCL9Q07325 125 aa13.69□□□□□ -0.22
KRT4-205ENST00000552668 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
KRT4-205ENST00000552668 C3orf67Q6ZVT6 689 aa13.69□□□□□ -0.22
KRT4-205ENST00000552668 RIC1Q4ADV7 1423 aa13.69□□□□□ -0.22
KRT4-205ENST00000552668 NPC1L1Q9UHC9 1359 aa13.69□□□□□ -0.22
KRT4-205ENST00000552668 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
KRT4-205ENST00000552668 GMPSP49915 693 aaPredicted RBP13.68□□□□□ -0.22
KRT4-205ENST00000552668 NOGQ13253 232 aa13.68□□□□□ -0.22
KRT4-205ENST00000552668 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
KRT4-205ENST00000552668 TRPM4Q8TD43 1214 aa13.68□□□□□ -0.22
KRT4-205ENST00000552668 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
KRT4-205ENST00000552668 KIF7Q2M1P5 1343 aa13.66□□□□□ -0.22
KRT4-205ENST00000552668 MKI67P46013 3256 aaKnown RBP13.66□□□□□ -0.22
KRT4-205ENST00000552668 BTBD11A6QL63 1104 aa13.66□□□□□ -0.22
KRT4-205ENST00000552668 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
KRT4-205ENST00000552668 AOC3Q16853 763 aa13.66□□□□□ -0.22
KRT4-205ENST00000552668 NPM2Q86SE8 214 aaKnown RBP13.66□□□□□ -0.22
KRT4-205ENST00000552668 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
KRT4-205ENST00000552668 PHACTR3Q96KR7 559 aa13.66□□□□□ -0.22
KRT4-205ENST00000552668 ZNF408Q9H9D4 720 aa13.66□□□□□ -0.22
KRT4-205ENST00000552668 ZC3H15Q8WU90 426 aaKnown RBP13.65□□□□□ -0.22
KRT4-205ENST00000552668 RNF186Q9NXI6 227 aa13.65□□□□□ -0.22
KRT4-205ENST00000552668 SAGE1Q9NXZ1 904 aa13.65□□□□□ -0.22
KRT4-205ENST00000552668 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
KRT4-205ENST00000552668 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
KRT4-205ENST00000552668 TCERG1O14776 1098 aaKnown RBP13.64□□□□□ -0.23
KRT4-205ENST00000552668 PPIP5K2O43314 1243 aa13.64□□□□□ -0.23
KRT4-205ENST00000552668 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
KRT4-205ENST00000552668 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
KRT4-205ENST00000552668 HUNKP57058 714 aa13.64□□□□□ -0.23
KRT4-205ENST00000552668 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
KRT4-205ENST00000552668 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
KRT4-205ENST00000552668 ZNRF3Q9ULT6 936 aa13.64□□□□□ -0.23
KRT4-205ENST00000552668 HTTP42858 3142 aa13.63□□□□□ -0.23
KRT4-205ENST00000552668 PPEF1O14829 653 aaPredicted RBP13.63□□□□□ -0.23
KRT4-205ENST00000552668 KIF23Q02241 960 aaPredicted RBP13.63□□□□□ -0.23
KRT4-205ENST00000552668 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
KRT4-205ENST00000552668 CDC37L1Q7L3B6 337 aa13.63□□□□□ -0.23
KRT4-205ENST00000552668 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
KRT4-205ENST00000552668 RTFDC1Q9BY42 306 aaPredicted RBP13.63□□□□□ -0.23
KRT4-205ENST00000552668 TRPA1O75762 1119 aa13.62□□□□□ -0.23
KRT4-205ENST00000552668 RGMBQ6NW40 437 aa13.62□□□□□ -0.23
KRT4-205ENST00000552668 HPS5Q9UPZ3 1129 aa13.62□□□□□ -0.23
KRT4-205ENST00000552668 CDHR2Q9BYE9 1310 aa13.62□□□□□ -0.23
KRT4-205ENST00000552668 IBTKQ9P2D0 1353 aaPredicted RBP13.61□□□□□ -0.23
KRT4-205ENST00000552668 YDJCA8MPS7 323 aa13.61□□□□□ -0.23
KRT4-205ENST00000552668 EGFRP00533 1210 aa13.61□□□□□ -0.23
KRT4-205ENST00000552668 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
KRT4-205ENST00000552668 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
KRT4-205ENST00000552668 CTU1Q7Z7A3 348 aaKnown RBP13.61□□□□□ -0.23
KRT4-205ENST00000552668 RPGRQ92834 1020 aaKnown RBP13.61□□□□□ -0.23
KRT4-205ENST00000552668 CSRNP1Q96S65 589 aa13.61□□□□□ -0.23
KRT4-205ENST00000552668 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
KRT4-205ENST00000552668 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
KRT4-205ENST00000552668 NUP98P52948 1817 aa13.6□□□□□ -0.23
KRT4-205ENST00000552668 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
KRT4-205ENST00000552668 RAD17O75943 681 aa13.6□□□□□ -0.23
KRT4-205ENST00000552668 NTSR2O95665 410 aa13.6□□□□□ -0.23
KRT4-205ENST00000552668 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
KRT4-205ENST00000552668 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
KRT4-205ENST00000552668 DUOX1Q9NRD9 1551 aa13.59□□□□□ -0.23
KRT4-205ENST00000552668 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
KRT4-205ENST00000552668 GPTP24298 496 aa13.59□□□□□ -0.23
KRT4-205ENST00000552668 MCM10Q7L590 875 aa13.59□□□□□ -0.23
KRT4-205ENST00000552668 ZNF34Q8IZ26 560 aa13.59□□□□□ -0.23
KRT4-205ENST00000552668 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
KRT4-205ENST00000552668 CNOT7Q9UIV1 285 aaKnown RBP13.59□□□□□ -0.23
KRT4-205ENST00000552668 ADM5C9JUS6 153 aa13.58□□□□□ -0.24
KRT4-205ENST00000552668 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
KRT4-205ENST00000552668 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
KRT4-205ENST00000552668 SAMD7Q7Z3H4 446 aa13.58□□□□□ -0.24
KRT4-205ENST00000552668 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
KRT4-205ENST00000552668 GBA2Q9HCG7 927 aaPredicted RBP13.58□□□□□ -0.24
KRT4-205ENST00000552668 CEP290O15078 2479 aa13.58□□□□□ -0.24
KRT4-205ENST00000552668 ABCC4O15439 1325 aa13.58□□□□□ -0.24
KRT4-205ENST00000552668 MAP3K15Q6ZN16 1313 aa13.58□□□□□ -0.24
KRT4-205ENST00000552668 POLR2AP24928 1970 aaKnown RBP13.58□□□□□ -0.24
KRT4-205ENST00000552668 SLC10A3P09131 477 aa13.57□□□□□ -0.24
KRT4-205ENST00000552668 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
KRT4-205ENST00000552668 HABP4Q5JVS0 413 aaKnown RBP13.57□□□□□ -0.24
KRT4-205ENST00000552668 MICALL2Q8IY33 904 aa13.57□□□□□ -0.24
KRT4-205ENST00000552668 CCDC102AQ96A19 550 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms