RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 KIF1BPQ96EK5 621 aa15.69■□□□□ 0.1
CACNB3-223ENST00000552480 FOXO4P98177 505 aa15.68■□□□□ 0.1
CACNB3-223ENST00000552480 RC3H1Q5TC82 1133 aaKnown RBP15.68■□□□□ 0.1
CACNB3-223ENST00000552480 OSBPL3Q9H4L5 887 aa15.68■□□□□ 0.1
CACNB3-223ENST00000552480 TBC1D2BQ9UPU7 963 aa15.68■□□□□ 0.1
CACNB3-223ENST00000552480 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
CACNB3-223ENST00000552480 TAF1LQ8IZX4 1826 aa15.67■□□□□ 0.1
CACNB3-223ENST00000552480 CAMTA2O94983 1202 aa15.67■□□□□ 0.1
CACNB3-223ENST00000552480 TTC22Q5TAA0 569 aa15.67■□□□□ 0.1
CACNB3-223ENST00000552480 NLRP10Q86W26 655 aa15.67■□□□□ 0.1
CACNB3-223ENST00000552480 OTUD7AQ8TE49 926 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-223ENST00000552480 CCNL1Q9UK58 526 aaPredicted RBP15.67■□□□□ 0.1
CACNB3-223ENST00000552480 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
CACNB3-223ENST00000552480 SCN7AQ01118 1682 aa15.67■□□□□ 0.1
CACNB3-223ENST00000552480 RFX5P48382 616 aaPredicted RBP15.66■□□□□ 0.1
CACNB3-223ENST00000552480 OS9Q13438 667 aaPredicted RBP15.66■□□□□ 0.1
CACNB3-223ENST00000552480 ZNF34Q8IZ26 560 aa15.66■□□□□ 0.1
CACNB3-223ENST00000552480 ZBTB38Q8NAP3 1195 aaPredicted RBP15.66■□□□□ 0.1
CACNB3-223ENST00000552480 PLA2G12BQ9BX93 195 aa15.66■□□□□ 0.1
CACNB3-223ENST00000552480 PA2G4Q9UQ80 394 aaKnown RBP15.66■□□□□ 0.1
CACNB3-223ENST00000552480 AOX1Q06278 1338 aa15.66■□□□□ 0.1
CACNB3-223ENST00000552480 RGL2O15211 777 aa15.65■□□□□ 0.1
CACNB3-223ENST00000552480 PDE1AP54750 535 aa15.65■□□□□ 0.1
CACNB3-223ENST00000552480 G3BP1Q13283 466 aaKnown RBP eCLIP15.65■□□□□ 0.1
CACNB3-223ENST00000552480 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
CACNB3-223ENST00000552480 COPRSQ9NQ92 184 aa15.65■□□□□ 0.1
CACNB3-223ENST00000552480 STAP2Q9UGK3 403 aa15.65■□□□□ 0.1
CACNB3-223ENST00000552480 C4BP0C0L5 1744 aa15.64■□□□□ 0.09
CACNB3-223ENST00000552480 GSPT1P15170 499 aaKnown RBP15.64■□□□□ 0.09
CACNB3-223ENST00000552480 MX1P20591 662 aa15.64■□□□□ 0.09
CACNB3-223ENST00000552480 GPTP24298 496 aa15.64■□□□□ 0.09
CACNB3-223ENST00000552480 ILDR2Q71H61 639 aa15.64■□□□□ 0.09
CACNB3-223ENST00000552480 BCL11AQ9H165 835 aa15.64■□□□□ 0.09
CACNB3-223ENST00000552480 IL1RAPL2Q9NP60 686 aa15.64■□□□□ 0.09
CACNB3-223ENST00000552480 ZNF652Q9Y2D9 606 aa15.64■□□□□ 0.09
CACNB3-223ENST00000552480 RPS6KA4O75676 772 aa15.63■□□□□ 0.09
CACNB3-223ENST00000552480 KCNQ4P56696 695 aa15.63■□□□□ 0.09
CACNB3-223ENST00000552480 PTPN12Q05209 780 aaKnown RBP15.63■□□□□ 0.09
CACNB3-223ENST00000552480 PARP10Q53GL7 1025 aa15.63■□□□□ 0.09
CACNB3-223ENST00000552480 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
CACNB3-223ENST00000552480 UBN2Q6ZU65 1347 aa15.63■□□□□ 0.09
CACNB3-223ENST00000552480 TUBGCP6Q96RT7 1819 aa15.62■□□□□ 0.09
CACNB3-223ENST00000552480 RXRBP28702 533 aa15.62■□□□□ 0.09
CACNB3-223ENST00000552480 CLEC4GQ6UXB4 293 aa15.62■□□□□ 0.09
CACNB3-223ENST00000552480 CLASRPQ8N2M8 674 aaKnown RBP15.62■□□□□ 0.09
CACNB3-223ENST00000552480 FAM89AQ96GI7 184 aa15.62■□□□□ 0.09
CACNB3-223ENST00000552480 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
CACNB3-223ENST00000552480 SASH1O94885 1247 aa15.61■□□□□ 0.09
CACNB3-223ENST00000552480 ANP32AP39687 249 aaKnown RBP15.61■□□□□ 0.09
CACNB3-223ENST00000552480 TRMT112Q9UI30 125 aaKnown RBP15.61■□□□□ 0.09
CACNB3-223ENST00000552480 CHMP3Q9Y3E7 222 aa15.61■□□□□ 0.09
CACNB3-223ENST00000552480 LAMB2P55268 1798 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 GNPATO15228 680 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 CDC45O75419 566 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 SEC24BO95487 1268 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 CSF1RP07333 972 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 SLC27A3Q5K4L6 730 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 NUTM1Q86Y26 1132 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 KLHDC4Q8TBB5 520 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 AK7Q96M32 723 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 SIL1Q9H173 461 aa15.6■□□□□ 0.09
CACNB3-223ENST00000552480 IRS4O14654 1257 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-223ENST00000552480 TRIM37O94972 964 aa15.59■□□□□ 0.09
CACNB3-223ENST00000552480 UTP14AQ9BVJ6 771 aaKnown RBP15.59■□□□□ 0.09
CACNB3-223ENST00000552480 UPF2Q9HAU5 1272 aaKnown RBP15.59■□□□□ 0.09
CACNB3-223ENST00000552480 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
CACNB3-223ENST00000552480 TTC41PQ6P2S7 1318 aa15.59■□□□□ 0.09
CACNB3-223ENST00000552480 MYH3P11055 1940 aa15.58■□□□□ 0.09
CACNB3-223ENST00000552480 C4AP0C0L4 1744 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 PDE8AO60658 829 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 IFIT2P09913 472 aaKnown RBP15.58■□□□□ 0.08
CACNB3-223ENST00000552480 SDSP20132 328 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 HMGB2P26583 209 aaKnown RBP15.58■□□□□ 0.08
CACNB3-223ENST00000552480 CTSWP56202 376 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 SUSD4Q5VX71 490 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 GPATCH3Q96I76 525 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 NARFQ9UHQ1 456 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 NIP7Q9Y221 180 aaKnown RBP eCLIP15.58■□□□□ 0.08
CACNB3-223ENST00000552480 SH3TC1Q8TE82 1336 aa15.58■□□□□ 0.08
CACNB3-223ENST00000552480 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
CACNB3-223ENST00000552480 CIAO1O76071 339 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 NTSR2O95665 410 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 CCDC57Q2TAC2 916 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 TSHZ3Q63HK5 1081 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 TBC1D9Q6ZT07 1266 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 AACSQ86V21 672 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 SYNE4Q8N205 404 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 LRRC4BQ9NT99 713 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 COL24A1Q17RW2 1714 aa15.57■□□□□ 0.08
CACNB3-223ENST00000552480 DDX60Q8IY21 1712 aaKnown RBP15.57■□□□□ 0.08
CACNB3-223ENST00000552480 HSP90B1P14625 803 aaKnown RBP15.56■□□□□ 0.08
CACNB3-223ENST00000552480 IL15P40933 162 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-223ENST00000552480 TTLL11Q8NHH1 800 aa15.56■□□□□ 0.08
CACNB3-223ENST00000552480 PI4K2BQ8TCG2 481 aa15.56■□□□□ 0.08
CACNB3-223ENST00000552480 RGS17Q9UGC6 210 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-223ENST00000552480 UBR3Q6ZT12 1888 aa15.55■□□□□ 0.08
CACNB3-223ENST00000552480 LRP5O75197 1615 aa15.55■□□□□ 0.08
CACNB3-223ENST00000552480 EYA2O00167 538 aa15.55■□□□□ 0.08
CACNB3-223ENST00000552480 ERC2O15083 957 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms