RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
HCFC2-206ENST00000552343 NOD1Q9Y239 953 aa7.72□□□□□ -1.17
HCFC2-206ENST00000552343 KCNQ4P56696 695 aa7.71□□□□□ -1.18
HCFC2-206ENST00000552343 PSME1Q06323 249 aa7.71□□□□□ -1.18
HCFC2-206ENST00000552343 TBC1D8BQ0IIM8 1120 aa7.71□□□□□ -1.18
HCFC2-206ENST00000552343 BHMTQ93088 406 aa7.71□□□□□ -1.18
HCFC2-206ENST00000552343 SFI1A8K8P3 1242 aa7.7□□□□□ -1.18
HCFC2-206ENST00000552343 SOX11P35716 441 aa7.7□□□□□ -1.18
HCFC2-206ENST00000552343 CCDC82Q8N4S0 544 aa7.7□□□□□ -1.18
HCFC2-206ENST00000552343 CALR3Q96L12 384 aaKnown RBP7.7□□□□□ -1.18
HCFC2-206ENST00000552343 JPH1Q9HDC5 661 aaPredicted RBP7.7□□□□□ -1.18
HCFC2-206ENST00000552343 USP21Q9UK80 565 aa7.7□□□□□ -1.18
HCFC2-206ENST00000552343 SKIP12755 728 aa7.69□□□□□ -1.18
HCFC2-206ENST00000552343 TYRO3Q06418 890 aa7.69□□□□□ -1.18
HCFC2-206ENST00000552343 LCE1DQ5T752 114 aa7.69□□□□□ -1.18
HCFC2-206ENST00000552343 FMR1NBQ8N0W7 255 aaPredicted RBP7.69□□□□□ -1.18
HCFC2-206ENST00000552343 ZNF280CQ8ND82 737 aa7.69□□□□□ -1.18
HCFC2-206ENST00000552343 NUDT8Q8WV74 236 aa7.69□□□□□ -1.18
HCFC2-206ENST00000552343 UBE2OQ9C0C9 1292 aaKnown RBP7.69□□□□□ -1.18
HCFC2-206ENST00000552343 SLC6A14Q9UN76 642 aa7.69□□□□□ -1.18
HCFC2-206ENST00000552343 C1orf53Q5VUE5 145 aa7.68□□□□□ -1.18
HCFC2-206ENST00000552343 IGFLR1Q9H665 355 aa7.68□□□□□ -1.18
HCFC2-206ENST00000552343 ANKIB1Q9P2G1 1089 aa7.68□□□□□ -1.18
HCFC2-206ENST00000552343 HCN4Q9Y3Q4 1203 aa7.68□□□□□ -1.18
HCFC2-206ENST00000552343 AFF1P51825 1210 aaKnown RBP7.67□□□□□ -1.18
HCFC2-206ENST00000552343 ILDR2Q71H61 639 aa7.67□□□□□ -1.18
HCFC2-206ENST00000552343 DMRTC2Q8IXT2 367 aaPredicted RBP7.67□□□□□ -1.18
HCFC2-206ENST00000552343 PHACTR1Q9C0D0 580 aa7.67□□□□□ -1.18
HCFC2-206ENST00000552343 RNF112Q9ULX5 631 aa7.67□□□□□ -1.18
HCFC2-206ENST00000552343 LZTS3O60299 673 aaPredicted RBP7.66□□□□□ -1.18
HCFC2-206ENST00000552343 NCOA4Q13772 614 aa7.66□□□□□ -1.18
HCFC2-206ENST00000552343 PSAPL1Q6NUJ1 521 aa7.66□□□□□ -1.18
HCFC2-206ENST00000552343 SUSD3Q96L08 255 aa7.66□□□□□ -1.18
HCFC2-206ENST00000552343 PSMA6P60900 246 aaKnown RBP7.65□□□□□ -1.18
HCFC2-206ENST00000552343 PDE4CQ08493 712 aa7.65□□□□□ -1.18
HCFC2-206ENST00000552343 MCTP1Q6DN14 999 aa7.65□□□□□ -1.18
HCFC2-206ENST00000552343 C1orf115Q9H7X2 142 aa7.65□□□□□ -1.18
HCFC2-206ENST00000552343 DNAJB12Q9NXW2 375 aaKnown RBP7.65□□□□□ -1.18
HCFC2-206ENST00000552343 NAGPAQ9UK23 515 aa7.65□□□□□ -1.18
HCFC2-206ENST00000552343 HIRAP54198 1017 aaPredicted RBP7.64□□□□□ -1.19
HCFC2-206ENST00000552343 WFDC12Q8WWY7 111 aa7.64□□□□□ -1.19
HCFC2-206ENST00000552343 GLMNQ92990 594 aa7.64□□□□□ -1.19
HCFC2-206ENST00000552343 TSPAN10Q9H1Z9 355 aaPredicted RBP7.64□□□□□ -1.19
HCFC2-206ENST00000552343 RGS9O75916 674 aaPredicted RBP7.63□□□□□ -1.19
HCFC2-206ENST00000552343 POTEAQ6S8J7 498 aa7.63□□□□□ -1.19
HCFC2-206ENST00000552343 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
HCFC2-206ENST00000552343 PPP1R15AO75807 674 aaPredicted RBP7.62□□□□□ -1.19
HCFC2-206ENST00000552343 IREB2P48200 963 aaKnown RBP7.62□□□□□ -1.19
HCFC2-206ENST00000552343 NFATC2IPQ8NCF5 419 aa7.62□□□□□ -1.19
HCFC2-206ENST00000552343 TPCN2Q8NHX9 752 aa7.62□□□□□ -1.19
HCFC2-206ENST00000552343 KIAA1024Q9UPX6 916 aa7.62□□□□□ -1.19
HCFC2-206ENST00000552343 CHMP3Q9Y3E7 222 aa7.62□□□□□ -1.19
HCFC2-206ENST00000552343 ACIN1Q9UKV3 1341 aaKnown RBP7.61□□□□□ -1.19
HCFC2-206ENST00000552343 ZBTB7BO15156 539 aaPredicted RBP7.61□□□□□ -1.19
HCFC2-206ENST00000552343 NOS3P29474 1203 aa7.61□□□□□ -1.19
HCFC2-206ENST00000552343 MSL1Q68DK7 614 aa7.61□□□□□ -1.19
HCFC2-206ENST00000552343 BTLAQ7Z6A9 289 aa7.61□□□□□ -1.19
HCFC2-206ENST00000552343 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
HCFC2-206ENST00000552343 GSX2Q9BZM3 304 aa7.61□□□□□ -1.19
HCFC2-206ENST00000552343 ALG2Q9H553 416 aa7.61□□□□□ -1.19
HCFC2-206ENST00000552343 EFCC1Q9HA90 598 aa7.61□□□□□ -1.19
HCFC2-206ENST00000552343 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
HCFC2-206ENST00000552343 HDGFL1Q5TGJ6 251 aa7.6□□□□□ -1.19
HCFC2-206ENST00000552343 MEGF10Q96KG7 1140 aa7.6□□□□□ -1.19
HCFC2-206ENST00000552343 COL17A1Q9UMD9 1497 aaPredicted RBP7.6□□□□□ -1.19
HCFC2-206ENST00000552343 CCDC102BQ68D86 513 aa7.59□□□□□ -1.19
HCFC2-206ENST00000552343 PRR23CQ6ZRP0 262 aa7.59□□□□□ -1.19
HCFC2-206ENST00000552343 TRIM50Q86XT4 487 aa7.59□□□□□ -1.19
HCFC2-206ENST00000552343 DTWD1Q8N5C7 304 aa7.59□□□□□ -1.19
HCFC2-206ENST00000552343 PCMTD2Q9NV79 361 aa7.59□□□□□ -1.19
HCFC2-206ENST00000552343 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.59□□□□□ -1.19
HCFC2-206ENST00000552343 COBLO75128 1261 aa7.58□□□□□ -1.2
HCFC2-206ENST00000552343 PDIA4P13667 645 aaKnown RBP7.58□□□□□ -1.2
HCFC2-206ENST00000552343 NFKB1P19838 968 aa7.58□□□□□ -1.2
HCFC2-206ENST00000552343 GRIK5Q16478 980 aa7.58□□□□□ -1.2
HCFC2-206ENST00000552343 ALDH16A1Q8IZ83 802 aa7.58□□□□□ -1.2
HCFC2-206ENST00000552343 PNMA5Q96PV4 448 aa7.58□□□□□ -1.2
HCFC2-206ENST00000552343 POM121CA8CG34 1229 aa7.57□□□□□ -1.2
HCFC2-206ENST00000552343 PAX4O43316 350 aa7.57□□□□□ -1.2
HCFC2-206ENST00000552343 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
HCFC2-206ENST00000552343 CLDN10P78369 228 aa7.57□□□□□ -1.2
HCFC2-206ENST00000552343 CCINQ13939 588 aa7.57□□□□□ -1.2
HCFC2-206ENST00000552343 FAM35AQ86V20 835 aa7.57□□□□□ -1.2
HCFC2-206ENST00000552343 C21orf2O43822 256 aa7.56□□□□□ -1.2
HCFC2-206ENST00000552343 CPB1P15086 417 aa7.56□□□□□ -1.2
HCFC2-206ENST00000552343 SSTR4P31391 388 aa7.56□□□□□ -1.2
HCFC2-206ENST00000552343 PLAURQ03405 335 aa7.56□□□□□ -1.2
HCFC2-206ENST00000552343 IGF2-ASQ6U949 168 aa7.56□□□□□ -1.2
HCFC2-206ENST00000552343 LPIN3Q9BQK8 851 aa7.56□□□□□ -1.2
HCFC2-206ENST00000552343 M0R2N6 131 aa7.55□□□□□ -1.2
HCFC2-206ENST00000552343 TXKP42681 527 aa7.55□□□□□ -1.2
HCFC2-206ENST00000552343 ATP1A2P50993 1020 aa7.55□□□□□ -1.2
HCFC2-206ENST00000552343 HIF1AQ16665 826 aa7.55□□□□□ -1.2
HCFC2-206ENST00000552343 WFDC8Q8IUA0 241 aa7.55□□□□□ -1.2
HCFC2-206ENST00000552343 TSEN2Q8NCE0 465 aaKnown RBP7.55□□□□□ -1.2
HCFC2-206ENST00000552343 ZBTB42B2RXF5 422 aa7.54□□□□□ -1.2
HCFC2-206ENST00000552343 FSTP19883 344 aa7.54□□□□□ -1.2
HCFC2-206ENST00000552343 PERM1Q5SV97 790 aa7.54□□□□□ -1.2
HCFC2-206ENST00000552343 NGLY1Q96IV0 654 aa7.54□□□□□ -1.2
HCFC2-206ENST00000552343 FMNL2Q96PY5 1086 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms