RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
SNRPF-204ENST00000552085 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
SNRPF-204ENST00000552085 NIM1KQ8IY84 436 aa17.1■□□□□ 0.33
SNRPF-204ENST00000552085 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
SNRPF-204ENST00000552085 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
SNRPF-204ENST00000552085 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
SNRPF-204ENST00000552085 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
SNRPF-204ENST00000552085 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
SNRPF-204ENST00000552085 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
SNRPF-204ENST00000552085 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.32
SNRPF-204ENST00000552085 A1BGP04217 495 aa17.08■□□□□ 0.32
SNRPF-204ENST00000552085 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.32
SNRPF-204ENST00000552085 ZNF157P51786 506 aaPredicted RBP17.07■□□□□ 0.32
SNRPF-204ENST00000552085 GRIPAP1Q4V328 841 aa17.07■□□□□ 0.32
SNRPF-204ENST00000552085 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
SNRPF-204ENST00000552085 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
SNRPF-204ENST00000552085 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
SNRPF-204ENST00000552085 GMPSP49915 693 aaPredicted RBP17.06■□□□□ 0.32
SNRPF-204ENST00000552085 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
SNRPF-204ENST00000552085 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
SNRPF-204ENST00000552085 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
SNRPF-204ENST00000552085 ZNF652Q9Y2D9 606 aa17.06■□□□□ 0.32
SNRPF-204ENST00000552085 GBA2Q9HCG7 927 aaPredicted RBP17.05■□□□□ 0.32
SNRPF-204ENST00000552085 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
SNRPF-204ENST00000552085 CDHR2Q9BYE9 1310 aa17.04■□□□□ 0.32
SNRPF-204ENST00000552085 SLC10A3P09131 477 aa17.04■□□□□ 0.32
SNRPF-204ENST00000552085 CXCL9Q07325 125 aa17.04■□□□□ 0.32
SNRPF-204ENST00000552085 FBXO46Q6PJ61 603 aaPredicted RBP17.04■□□□□ 0.32
SNRPF-204ENST00000552085 C2orf69Q8N8R5 385 aa17.04■□□□□ 0.32
SNRPF-204ENST00000552085 RBBP6Q7Z6E9 1792 aaKnown RBP17.03■□□□□ 0.32
SNRPF-204ENST00000552085 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
SNRPF-204ENST00000552085 DLK2Q6UY11 383 aa17.03■□□□□ 0.32
SNRPF-204ENST00000552085 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
SNRPF-204ENST00000552085 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
SNRPF-204ENST00000552085 NIP7Q9Y221 180 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNRPF-204ENST00000552085 FAM177BA6PVY3 158 aa17.02■□□□□ 0.32
SNRPF-204ENST00000552085 AOC3Q16853 763 aa17.02■□□□□ 0.32
SNRPF-204ENST00000552085 CRY2Q49AN0 593 aa17.02■□□□□ 0.32
SNRPF-204ENST00000552085 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
SNRPF-204ENST00000552085 GTF2E1P29083 439 aaPredicted RBP17.01■□□□□ 0.31
SNRPF-204ENST00000552085 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
SNRPF-204ENST00000552085 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
SNRPF-204ENST00000552085 ZNF296Q8WUU4 475 aaPredicted RBP17.01■□□□□ 0.31
SNRPF-204ENST00000552085 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
SNRPF-204ENST00000552085 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
SNRPF-204ENST00000552085 PAPPA2Q9BXP8 1791 aa17.01■□□□□ 0.31
SNRPF-204ENST00000552085 IL13P35225 146 aa17■□□□□ 0.31
SNRPF-204ENST00000552085 COLQQ9Y215 455 aaPredicted RBP17■□□□□ 0.31
SNRPF-204ENST00000552085 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
SNRPF-204ENST00000552085 CNOT7Q9UIV1 285 aaKnown RBP16.99■□□□□ 0.31
SNRPF-204ENST00000552085 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
SNRPF-204ENST00000552085 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
SNRPF-204ENST00000552085 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
SNRPF-204ENST00000552085 KRT26Q7Z3Y9 468 aa16.98■□□□□ 0.31
SNRPF-204ENST00000552085 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
SNRPF-204ENST00000552085 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
SNRPF-204ENST00000552085 H7C1D1 291 aa16.97■□□□□ 0.31
SNRPF-204ENST00000552085 PPEF1O14829 653 aaPredicted RBP16.97■□□□□ 0.31
SNRPF-204ENST00000552085 RGL2O15211 777 aa16.97■□□□□ 0.31
SNRPF-204ENST00000552085 TNIP1Q15025 636 aa16.97■□□□□ 0.31
SNRPF-204ENST00000552085 ABCC12Q96J65 1359 aa16.97■□□□□ 0.31
SNRPF-204ENST00000552085 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
SNRPF-204ENST00000552085 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
SNRPF-204ENST00000552085 SHTN1A0MZ66 631 aa16.96■□□□□ 0.31
SNRPF-204ENST00000552085 POTEFA5A3E0 1075 aa16.96■□□□□ 0.31
SNRPF-204ENST00000552085 TCERG1O14776 1098 aaKnown RBP16.96■□□□□ 0.31
SNRPF-204ENST00000552085 TBC1D8O95759 1140 aa16.96■□□□□ 0.31
SNRPF-204ENST00000552085 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
SNRPF-204ENST00000552085 TEFQ10587 303 aa16.95■□□□□ 0.3
SNRPF-204ENST00000552085 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
SNRPF-204ENST00000552085 MICALL2Q8IY33 904 aa16.95■□□□□ 0.3
SNRPF-204ENST00000552085 CRAMP1Q96RY5 1269 aa16.95■□□□□ 0.3
SNRPF-204ENST00000552085 NUP98P52948 1817 aa16.94■□□□□ 0.3
SNRPF-204ENST00000552085 GPR25O00155 361 aa16.94■□□□□ 0.3
SNRPF-204ENST00000552085 RAD17O75943 681 aa16.94■□□□□ 0.3
SNRPF-204ENST00000552085 NOM1Q5C9Z4 860 aaKnown RBP16.94■□□□□ 0.3
SNRPF-204ENST00000552085 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
SNRPF-204ENST00000552085 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
SNRPF-204ENST00000552085 USP16Q9Y5T5 823 aa16.94■□□□□ 0.3
SNRPF-204ENST00000552085 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
SNRPF-204ENST00000552085 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
SNRPF-204ENST00000552085 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
SNRPF-204ENST00000552085 DCPSQ96C86 337 aaKnown RBP16.93■□□□□ 0.3
SNRPF-204ENST00000552085 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
SNRPF-204ENST00000552085 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
SNRPF-204ENST00000552085 HMOX1P09601 288 aa16.92■□□□□ 0.3
SNRPF-204ENST00000552085 SAMD7Q7Z3H4 446 aa16.92■□□□□ 0.3
SNRPF-204ENST00000552085 HLFQ16534 295 aa16.91■□□□□ 0.3
SNRPF-204ENST00000552085 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
SNRPF-204ENST00000552085 KIAA2012Q0VF49 1180 aa16.9■□□□□ 0.3
SNRPF-204ENST00000552085 TBC1D10BQ4KMP7 808 aaPredicted RBP16.9■□□□□ 0.3
SNRPF-204ENST00000552085 IL17REQ8NFR9 667 aa16.9■□□□□ 0.3
SNRPF-204ENST00000552085 ATP6V0A2Q9Y487 856 aa16.9■□□□□ 0.3
SNRPF-204ENST00000552085 TRIOBPQ9H2D6 2365 aa16.9■□□□□ 0.3
SNRPF-204ENST00000552085 KIAA0100Q14667 2235 aaKnown RBP16.89■□□□□ 0.29
SNRPF-204ENST00000552085 KCNQ3O43525 872 aa16.89■□□□□ 0.29
SNRPF-204ENST00000552085 FKTNO75072 461 aa16.89■□□□□ 0.29
SNRPF-204ENST00000552085 EGFRP00533 1210 aa16.89■□□□□ 0.29
SNRPF-204ENST00000552085 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
SNRPF-204ENST00000552085 DPF2Q92785 391 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms