RNA–Protein interactions for RNA: ENST00000552006.1

PPFIA2-225, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-225ENST00000552006 ZNF772Q68DY9 489 aaPredicted RBP6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 BARGINQ6ZT62 677 aa6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 BPHLQ86WA6 291 aaPredicted RBP6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 TMEM151AQ8N4L1 468 aa6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 ABTB2Q8N961 1025 aa6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 CNTNAP3BQ96NU0 1288 aa6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 CNTNAP3Q9BZ76 1288 aa6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 ADAMTS8Q9UP79 889 aa6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 GPRASP1Q5JY77 1395 aa6.77□□□□□ -1.33
PPFIA2-225ENST00000552006 EVC2Q86UK5 1308 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 TNS3Q68CZ2 1445 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 GDF11O95390 407 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 POLR3GLQ9BT43 218 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 SLC12A5Q9H2X9 1139 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 ZBTB3Q9H5J0 574 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 CCDC9Q9Y3X0 531 aaKnown RBP6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 RALGAPBQ86X10 1494 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 PLCH1Q4KWH8 1693 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 RGPD5Q99666 1765 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 BRWD3Q6RI45 1802 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 CRYBG1Q9Y4K1 1723 aa6.76□□□□□ -1.33
PPFIA2-225ENST00000552006 AKAP12Q02952 1782 aa6.75□□□□□ -1.33
PPFIA2-225ENST00000552006 SBNO1A3KN83 1393 aa6.75□□□□□ -1.33
PPFIA2-225ENST00000552006 EIF3AQ14152 1382 aaKnown RBP6.75□□□□□ -1.33
PPFIA2-225ENST00000552006 ZMYND10O75800 440 aa6.75□□□□□ -1.33
PPFIA2-225ENST00000552006 SH3RF1Q7Z6J0 888 aa6.75□□□□□ -1.33
PPFIA2-225ENST00000552006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.75□□□□□ -1.33
PPFIA2-225ENST00000552006 BTG4Q9NY30 223 aa6.75□□□□□ -1.33
PPFIA2-225ENST00000552006 BCL9LQ86UU0 1499 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 FBLN1P23142 703 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 FSHRP23945 695 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 PTSQ03393 145 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 DIXDC1Q155Q3 683 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 PRPF38BQ5VTL8 546 aaKnown RBP6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 RIC3Q7Z5B4 369 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 FNBP4Q8N3X1 1017 aaPredicted RBP6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 TESK2Q96S53 571 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 TSEN34Q9BSV6 310 aaKnown RBP6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 C1QTNF2Q9BXJ5 285 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 STRN4Q9NRL3 753 aa6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 PHRF1Q9P1Y6 1649 aaKnown RBP6.74□□□□□ -1.33
PPFIA2-225ENST00000552006 POLR3AO14802 1390 aaPredicted RBP6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 EP400Q96L91 3159 aa6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 FIGNL2A6NMB9 653 aa6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 RBM6P78332 1123 aaKnown RBP6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 UNC5CLQ8IV45 518 aa6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 COL25A1Q9BXS0 654 aaPredicted RBP6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 TRPC5Q9UL62 973 aaPredicted RBP6.73□□□□□ -1.33
PPFIA2-225ENST00000552006 ARHGEF10O15013 1369 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 KTN1Q86UP2 1357 aaKnown RBP6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 KIAA0232Q92628 1395 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 USP47Q96K76 1375 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 PIK3C2AO00443 1686 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 TTLL8A6PVC2 850 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 RNFT1Q5M7Z0 435 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 FAM182BQ5T319 152 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 ZNF385CQ66K41 422 aaPredicted RBP6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 VASH1Q7L8A9 365 aaPredicted RBP6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 NME9Q86XW9 330 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 PARP9Q8IXQ6 854 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 NANOS1Q8WY41 292 aaKnown RBP6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 TSC1Q92574 1164 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 GJD4Q96KN9 370 aaPredicted RBP6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 PRDM11Q9NQV5 511 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 MAP4K5Q9Y4K4 846 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 RGS12O14924 1447 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 ATRNO75882 1429 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 GLI3P10071 1580 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 TTC21BQ7Z4L5 1316 aa6.72□□□□□ -1.33
PPFIA2-225ENST00000552006 MON2Q7Z3U7 1717 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 NRAPQ86VF7 1730 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 USP6P35125 1406 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 GCP02774 474 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 HSPA5P11021 654 aaKnown RBP6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 EVA1CP58658 441 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 SH3BP5LQ7L8J4 393 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 NLRP13Q86W25 1043 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 TRMT44Q8IYL2 757 aaKnown RBP6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 VSIG10Q8N0Z9 540 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 WHAMMQ8TF30 809 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 COL14A1Q05707 1796 aaKnown RBP6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 CD163L1Q9NR16 1453 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 SLIT2O94813 1529 aa6.71□□□□□ -1.34
PPFIA2-225ENST00000552006 NWD2Q9ULI1 1742 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 MAGEB6P1A0A0J9YX57 407 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 CBLBQ13191 982 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 QPCTQ16769 361 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 LARP1Q6PKG0 1096 aaKnown RBP6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 SEPT12Q8IYM1 358 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 CCDC116Q8IYX3 515 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 CCDC155Q8N6L0 562 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 ARMC2Q8NEN0 867 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 ZC3H15Q8WU90 426 aaKnown RBP6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 LIMD1Q9UGP4 676 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 KAT6BQ8WYB5 2073 aa6.7□□□□□ -1.34
PPFIA2-225ENST00000552006 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms