RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 KIF23Q02241 960 aaPredicted RBP14.13□□□□□ -0.15
SLC48A1-209ENST00000552003 ZNF496Q96IT1 587 aaPredicted RBP14.13□□□□□ -0.15
SLC48A1-209ENST00000552003 CENPFP49454 3210 aa14.13□□□□□ -0.15
SLC48A1-209ENST00000552003 NPHP1O15259 732 aa14.12□□□□□ -0.15
SLC48A1-209ENST00000552003 STARD3NLO95772 234 aa14.12□□□□□ -0.15
SLC48A1-209ENST00000552003 IL6STP40189 918 aaPredicted RBP14.12□□□□□ -0.15
SLC48A1-209ENST00000552003 HUNKP57058 714 aa14.12□□□□□ -0.15
SLC48A1-209ENST00000552003 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
SLC48A1-209ENST00000552003 CEP290O15078 2479 aa14.12□□□□□ -0.15
SLC48A1-209ENST00000552003 POLR2AP24928 1970 aaKnown RBP14.11□□□□□ -0.15
SLC48A1-209ENST00000552003 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
SLC48A1-209ENST00000552003 NBPF5PQ86XG9 351 aaPredicted RBP14.11□□□□□ -0.15
SLC48A1-209ENST00000552003 SHTN1A0MZ66 631 aa14.1□□□□□ -0.15
SLC48A1-209ENST00000552003 PIP4K2AP48426 406 aaPredicted RBP14.1□□□□□ -0.15
SLC48A1-209ENST00000552003 TRPM4Q8TD43 1214 aa14.1□□□□□ -0.15
SLC48A1-209ENST00000552003 CSRNP1Q96S65 589 aa14.1□□□□□ -0.15
SLC48A1-209ENST00000552003 RGMBQ6NW40 437 aa14.09□□□□□ -0.15
SLC48A1-209ENST00000552003 LARGE2Q8N3Y3 721 aa14.09□□□□□ -0.15
SLC48A1-209ENST00000552003 COL6A3P12111 3177 aa14.09□□□□□ -0.15
SLC48A1-209ENST00000552003 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
SLC48A1-209ENST00000552003 RANBP2P49792 3224 aaKnown RBP14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 DLL1O00548 723 aa14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 IL13P35225 146 aa14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 GMPSP49915 693 aaPredicted RBP14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 CXCL9Q07325 125 aa14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 USP48Q86UV5 1035 aa14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 DZIP3Q86Y13 1208 aaKnown RBP14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 KIAA0100Q14667 2235 aaKnown RBP14.08□□□□□ -0.16
SLC48A1-209ENST00000552003 FAM177BA6PVY3 158 aa14.07□□□□□ -0.16
SLC48A1-209ENST00000552003 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
SLC48A1-209ENST00000552003 NPC1L1Q9UHC9 1359 aa14.07□□□□□ -0.16
SLC48A1-209ENST00000552003 ALDH1B1P30837 517 aa14.06□□□□□ -0.16
SLC48A1-209ENST00000552003 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
SLC48A1-209ENST00000552003 CRY2Q49AN0 593 aa14.06□□□□□ -0.16
SLC48A1-209ENST00000552003 ABCC12Q96J65 1359 aa14.06□□□□□ -0.16
SLC48A1-209ENST00000552003 SIPA1L3O60292 1781 aaPredicted RBP14.05□□□□□ -0.16
SLC48A1-209ENST00000552003 KCNQ3O43525 872 aa14.05□□□□□ -0.16
SLC48A1-209ENST00000552003 ZC3H15Q8WU90 426 aaKnown RBP14.05□□□□□ -0.16
SLC48A1-209ENST00000552003 PRAMEF22A3QJZ6 481 aa14.04□□□□□ -0.16
SLC48A1-209ENST00000552003 HOXD11P31277 338 aaPredicted RBP14.04□□□□□ -0.16
SLC48A1-209ENST00000552003 AOC3Q16853 763 aa14.04□□□□□ -0.16
SLC48A1-209ENST00000552003 ZNF790Q6PG37 636 aa14.04□□□□□ -0.16
SLC48A1-209ENST00000552003 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
SLC48A1-209ENST00000552003 POTEFA5A3E0 1075 aa14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 EGFRP00533 1210 aa14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 SLC10A3P09131 477 aa14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 ZNF157P51786 506 aaPredicted RBP14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 CLEC4GQ6UXB4 293 aa14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 NIM1KQ8IY84 436 aa14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 ZNF296Q8WUU4 475 aaPredicted RBP14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 GBA2Q9HCG7 927 aaPredicted RBP14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 COLQQ9Y215 455 aaPredicted RBP14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 NIP7Q9Y221 180 aaKnown RBP eCLIP14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 USP16Q9Y5T5 823 aa14.03□□□□□ -0.16
SLC48A1-209ENST00000552003 PPIP5K2O43314 1243 aa14.02□□□□□ -0.17
SLC48A1-209ENST00000552003 PKN2Q16513 984 aaKnown RBP14.02□□□□□ -0.17
SLC48A1-209ENST00000552003 HLFQ16534 295 aa14.02□□□□□ -0.17
SLC48A1-209ENST00000552003 CC2D2BQ6DHV5 1058 aa14.02□□□□□ -0.17
SLC48A1-209ENST00000552003 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.17
SLC48A1-209ENST00000552003 IL17REQ8NFR9 667 aa14.02□□□□□ -0.17
SLC48A1-209ENST00000552003 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
SLC48A1-209ENST00000552003 ADM5C9JUS6 153 aa14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 HMOX1P09601 288 aa14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 HOXA10P31260 410 aaPredicted RBP14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 C3orf67Q6ZVT6 689 aa14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 NUTM1Q86Y26 1132 aa14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 TEX13AQ9BXU3 409 aaPredicted RBP14.01□□□□□ -0.17
SLC48A1-209ENST00000552003 ZBTB22O15209 634 aa14□□□□□ -0.17
SLC48A1-209ENST00000552003 ZNRF3Q9ULT6 936 aa14□□□□□ -0.17
SLC48A1-209ENST00000552003 PAPPA2Q9BXP8 1791 aa14□□□□□ -0.17
SLC48A1-209ENST00000552003 NBPF26B4DH59 902 aa13.99□□□□□ -0.17
SLC48A1-209ENST00000552003 RAD17O75943 681 aa13.99□□□□□ -0.17
SLC48A1-209ENST00000552003 NBPF10Q6P3W6 841 aaKnown RBP13.99□□□□□ -0.17
SLC48A1-209ENST00000552003 FBXO46Q6PJ61 603 aaPredicted RBP13.99□□□□□ -0.17
SLC48A1-209ENST00000552003 SAMD7Q7Z3H4 446 aa13.99□□□□□ -0.17
SLC48A1-209ENST00000552003 CNOT7Q9UIV1 285 aaKnown RBP13.99□□□□□ -0.17
SLC48A1-209ENST00000552003 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
SLC48A1-209ENST00000552003 YDJCA8MPS7 323 aa13.98□□□□□ -0.17
SLC48A1-209ENST00000552003 RASAL3Q86YV0 1011 aa13.98□□□□□ -0.17
SLC48A1-209ENST00000552003 R3HDMLQ9H3Y0 253 aa13.98□□□□□ -0.17
SLC48A1-209ENST00000552003 HDAC9Q9UKV0 1011 aa13.98□□□□□ -0.17
SLC48A1-209ENST00000552003 PPEF1O14829 653 aaPredicted RBP13.97□□□□□ -0.17
SLC48A1-209ENST00000552003 KRT26Q7Z3Y9 468 aa13.97□□□□□ -0.17
SLC48A1-209ENST00000552003 C2orf69Q8N8R5 385 aa13.97□□□□□ -0.17
SLC48A1-209ENST00000552003 FMNL2Q96PY5 1086 aa13.97□□□□□ -0.17
SLC48A1-209ENST00000552003 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
SLC48A1-209ENST00000552003 KIF7Q2M1P5 1343 aa13.96□□□□□ -0.17
SLC48A1-209ENST00000552003 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.17
SLC48A1-209ENST00000552003 MICALL2Q8IY33 904 aa13.96□□□□□ -0.17
SLC48A1-209ENST00000552003 SLC17A8Q8NDX2 589 aa13.96□□□□□ -0.17
SLC48A1-209ENST00000552003 BCL2L13Q9BXK5 485 aa13.96□□□□□ -0.17
SLC48A1-209ENST00000552003 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.17
SLC48A1-209ENST00000552003 LAMA3Q16787 3333 aa13.96□□□□□ -0.18
SLC48A1-209ENST00000552003 ASTN2O75129 1339 aaPredicted RBP13.95□□□□□ -0.18
SLC48A1-209ENST00000552003 GPR25O00155 361 aa13.95□□□□□ -0.18
SLC48A1-209ENST00000552003 TBC1D10BQ4KMP7 808 aaPredicted RBP13.95□□□□□ -0.18
SLC48A1-209ENST00000552003 GRIPAP1Q4V328 841 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms