RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 PPP1R42Q7Z4L9 355 aa9.57□□□□□ -0.88
USP44-206ENST00000551837 NLRP10Q86W26 655 aa9.57□□□□□ -0.88
USP44-206ENST00000551837 COL23A1Q86Y22 540 aaPredicted RBP9.57□□□□□ -0.88
USP44-206ENST00000551837 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
USP44-206ENST00000551837 CWC25Q9NXE8 425 aaPredicted RBP9.57□□□□□ -0.88
USP44-206ENST00000551837 STK32BQ9NY57 414 aa9.57□□□□□ -0.88
USP44-206ENST00000551837 C9orf78Q9NZ63 289 aaPredicted RBP9.57□□□□□ -0.88
USP44-206ENST00000551837 NBPF7P0C2Y1 421 aaPredicted RBP9.56□□□□□ -0.88
USP44-206ENST00000551837 GYS1P13807 737 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 MTX1Q13505 466 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 HDAC1Q13547 482 aaPredicted RBP9.56□□□□□ -0.88
USP44-206ENST00000551837 CWF19L2Q2TBE0 894 aaKnown RBP9.56□□□□□ -0.88
USP44-206ENST00000551837 TPTE2Q6XPS3 522 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 AMIGO3Q86WK7 504 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 ARXQ96QS3 562 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 PLA2G12BQ9BX93 195 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 ZNF330Q9Y3S2 320 aaPredicted RBP9.56□□□□□ -0.88
USP44-206ENST00000551837 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 CDHR2Q9BYE9 1310 aa9.56□□□□□ -0.88
USP44-206ENST00000551837 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 CSF1RP07333 972 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 UBTFL1P0CB47 393 aaPredicted RBP9.55□□□□□ -0.88
USP44-206ENST00000551837 ZNF827Q17R98 1081 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 SUSD4Q5VX71 490 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 SETDB2Q96T68 719 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 MEIS3Q99687 375 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 RWDD1Q9H446 243 aaPredicted RBP9.55□□□□□ -0.88
USP44-206ENST00000551837 NIP7Q9Y221 180 aaKnown RBP eCLIP9.55□□□□□ -0.88
USP44-206ENST00000551837 COL5A3P25940 1745 aaPredicted RBP9.55□□□□□ -0.88
USP44-206ENST00000551837 PNPLA7Q6ZV29 1317 aa9.55□□□□□ -0.88
USP44-206ENST00000551837 C4BP0C0L5 1744 aa9.54□□□□□ -0.88
USP44-206ENST00000551837 IRX6P78412 446 aaPredicted RBP9.54□□□□□ -0.88
USP44-206ENST00000551837 RABL6Q3YEC7 729 aaPredicted RBP9.54□□□□□ -0.88
USP44-206ENST00000551837 ANKRD44Q8N8A2 993 aa9.54□□□□□ -0.88
USP44-206ENST00000551837 KAZALD1Q96I82 304 aa9.54□□□□□ -0.88
USP44-206ENST00000551837 UTP14AQ9BVJ6 771 aaKnown RBP9.54□□□□□ -0.88
USP44-206ENST00000551837 NYXQ9GZU5 481 aa9.54□□□□□ -0.88
USP44-206ENST00000551837 PCDHB15Q9Y5E8 787 aa9.54□□□□□ -0.88
USP44-206ENST00000551837 TNS1Q9HBL0 1735 aaKnown RBP9.53□□□□□ -0.88
USP44-206ENST00000551837 TBC1D9BQ66K14 1250 aa9.53□□□□□ -0.88
USP44-206ENST00000551837 ILDR2Q71H61 639 aa9.53□□□□□ -0.88
USP44-206ENST00000551837 SMIM5Q71RC9 77 aa9.53□□□□□ -0.88
USP44-206ENST00000551837 SRP68Q9UHB9 627 aaKnown RBP9.53□□□□□ -0.88
USP44-206ENST00000551837 TRMT112Q9UI30 125 aaKnown RBP9.53□□□□□ -0.88
USP44-206ENST00000551837 MYH14Q7Z406 1995 aaKnown RBP9.53□□□□□ -0.88
USP44-206ENST00000551837 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
USP44-206ENST00000551837 PDE8AO60658 829 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 PHF14O94880 888 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 NTSR2O95665 410 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 FOXO4P98177 505 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 NFIXQ14938 502 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 CEP85Q6P2H3 762 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 SIRT2Q8IXJ6 389 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 SSH3Q8TE77 659 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 FAM89AQ96GI7 184 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 DCTPP1Q9H773 170 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 UBN2Q6ZU65 1347 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 TAF1LQ8IZX4 1826 aa9.52□□□□□ -0.89
USP44-206ENST00000551837 KLRG2A4D1S0 409 aaPredicted RBP9.51□□□□□ -0.89
USP44-206ENST00000551837 HMMRO75330 724 aa9.51□□□□□ -0.89
USP44-206ENST00000551837 GPTP24298 496 aa9.51□□□□□ -0.89
USP44-206ENST00000551837 SF3B3Q15393 1217 aaKnown RBP9.51□□□□□ -0.89
USP44-206ENST00000551837 GCC1Q96CN9 775 aa9.51□□□□□ -0.89
USP44-206ENST00000551837 SUCLG2Q96I99 432 aa9.51□□□□□ -0.89
USP44-206ENST00000551837 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
USP44-206ENST00000551837 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
USP44-206ENST00000551837 NOP58Q9Y2X3 529 aaKnown RBP9.51□□□□□ -0.89
USP44-206ENST00000551837 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
USP44-206ENST00000551837 IGHDP01880 384 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 SERPINB2P05120 415 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 UBE3BQ7Z3V4 1068 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 SMC5Q8IY18 1101 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 TTLL11Q8NHH1 800 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 CCDC136Q96JN2 1154 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 PDZRN3Q9UPQ7 1066 aa9.5□□□□□ -0.89
USP44-206ENST00000551837 LRRFIP2Q9Y608 721 aaKnown RBP9.5□□□□□ -0.89
USP44-206ENST00000551837 POLRMTO00411 1230 aaKnown RBP9.49□□□□□ -0.89
USP44-206ENST00000551837 GTF2E1P29083 439 aaPredicted RBP9.49□□□□□ -0.89
USP44-206ENST00000551837 HSP90AB4PQ58FF6 505 aa9.49□□□□□ -0.89
USP44-206ENST00000551837 EPHA10Q5JZY3 1008 aa9.49□□□□□ -0.89
USP44-206ENST00000551837 LMBR1LQ6UX01 489 aa9.49□□□□□ -0.89
USP44-206ENST00000551837 CENPQQ7L2Z9 268 aaPredicted RBP9.49□□□□□ -0.89
USP44-206ENST00000551837 BRIP1Q9BX63 1249 aa9.49□□□□□ -0.89
USP44-206ENST00000551837 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
USP44-206ENST00000551837 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
USP44-206ENST00000551837 CARMIL3Q8ND23 1372 aa9.49□□□□□ -0.89
USP44-206ENST00000551837 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
USP44-206ENST00000551837 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
USP44-206ENST00000551837 MYCNP04198 464 aaPredicted RBP9.48□□□□□ -0.89
USP44-206ENST00000551837 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
USP44-206ENST00000551837 NBPF5PQ86XG9 351 aaPredicted RBP9.48□□□□□ -0.89
USP44-206ENST00000551837 BICC1Q9H694 974 aaKnown RBP9.48□□□□□ -0.89
USP44-206ENST00000551837 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
USP44-206ENST00000551837 KDM2BQ8NHM5 1336 aa9.48□□□□□ -0.89
USP44-206ENST00000551837 RTL9Q8NET4 1388 aa9.48□□□□□ -0.89
USP44-206ENST00000551837 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
USP44-206ENST00000551837 UBR3Q6ZT12 1888 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms