RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 NNTQ13423 1086 aa11.63□□□□□ -0.55
RBFOX1-213ENST00000551752 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
RBFOX1-213ENST00000551752 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
RBFOX1-213ENST00000551752 GDPD2Q9HCC8 539 aa11.63□□□□□ -0.55
RBFOX1-213ENST00000551752 USP21Q9UK80 565 aa11.63□□□□□ -0.55
RBFOX1-213ENST00000551752 SBNO2Q9Y2G9 1366 aa11.63□□□□□ -0.55
RBFOX1-213ENST00000551752 CLSPNQ9HAW4 1339 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 ATRNO75882 1429 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 SLIT2O94813 1529 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 GPR37L1O60883 481 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 ADAMTS2O95450 1211 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 GRM5P41594 1212 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 NR5A1Q13285 461 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 CTC1Q2NKJ3 1217 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 NGDNQ8NEJ9 315 aaKnown RBP11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 TIMELESSQ9UNS1 1208 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 BCL9LQ86UU0 1499 aa11.62□□□□□ -0.55
RBFOX1-213ENST00000551752 TRPM1Q7Z4N2 1603 aa11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 AXIN1O15169 862 aa11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 FSHRP23945 695 aa11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 ABL2P42684 1182 aa11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 XPCQ01831 940 aaPredicted RBP11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 NR1H3Q13133 447 aa11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 UNC5CLQ8IV45 518 aa11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 PMFBP1Q8TBY8 1022 aa11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 PUS7Q96PZ0 661 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
RBFOX1-213ENST00000551752 ALS2Q96Q42 1657 aa11.6□□□□□ -0.55
RBFOX1-213ENST00000551752 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
RBFOX1-213ENST00000551752 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
RBFOX1-213ENST00000551752 ROCK2O75116 1388 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 LCE2BO14633 110 aa11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 NBPF20Q3BBV1 942 aa11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 NBPF8Q3BBV2 869 aa11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 KCTD15Q96SI1 283 aaPredicted RBP11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 AAASQ9NRG9 546 aa11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 PCDHB9Q9Y5E1 797 aa11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 TOPAZ1Q8N9V7 1692 aa11.59□□□□□ -0.55
RBFOX1-213ENST00000551752 NWD2Q9ULI1 1742 aa11.58□□□□□ -0.56
RBFOX1-213ENST00000551752 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
RBFOX1-213ENST00000551752 ST8SIA5O15466 376 aa11.58□□□□□ -0.56
RBFOX1-213ENST00000551752 RAD21O60216 631 aa11.58□□□□□ -0.56
RBFOX1-213ENST00000551752 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-213ENST00000551752 ACEP12821 1306 aa11.58□□□□□ -0.56
RBFOX1-213ENST00000551752 VPS72Q15906 364 aa11.57□□□□□ -0.56
RBFOX1-213ENST00000551752 ZNF592Q92610 1267 aa11.57□□□□□ -0.56
RBFOX1-213ENST00000551752 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
RBFOX1-213ENST00000551752 NR3C2P08235 984 aa11.56□□□□□ -0.56
RBFOX1-213ENST00000551752 WDR4P57081 412 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-213ENST00000551752 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-213ENST00000551752 IRF5Q13568 498 aa11.56□□□□□ -0.56
RBFOX1-213ENST00000551752 CCDC125Q86Z20 511 aa11.56□□□□□ -0.56
RBFOX1-213ENST00000551752 RALGAPBQ86X10 1494 aa11.56□□□□□ -0.56
RBFOX1-213ENST00000551752 ATAD2Q6PL18 1390 aa11.55□□□□□ -0.56
RBFOX1-213ENST00000551752 RGS12O14924 1447 aa11.55□□□□□ -0.56
RBFOX1-213ENST00000551752 CAPN5O15484 640 aaPredicted RBP11.55□□□□□ -0.56
RBFOX1-213ENST00000551752 CCDC116Q8IYX3 515 aa11.55□□□□□ -0.56
RBFOX1-213ENST00000551752 QRICH2Q9H0J4 1663 aa11.55□□□□□ -0.56
RBFOX1-213ENST00000551752 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
RBFOX1-213ENST00000551752 PPIP5K1Q6PFW1 1433 aa11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 FAM83GA6ND36 823 aa11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 MCCD1P59942 119 aaPredicted RBP11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 NLRP13Q86W25 1043 aa11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 CARD11Q9BXL7 1154 aa11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 USP19O94966 1318 aa11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 CPDO75976 1380 aa11.54□□□□□ -0.56
RBFOX1-213ENST00000551752 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
RBFOX1-213ENST00000551752 POM121Q96HA1 1249 aa11.53□□□□□ -0.56
RBFOX1-213ENST00000551752 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
RBFOX1-213ENST00000551752 SSH2Q76I76 1423 aa11.52□□□□□ -0.56
RBFOX1-213ENST00000551752 CRYBG1Q9Y4K1 1723 aa11.52□□□□□ -0.56
RBFOX1-213ENST00000551752 ZIC2O95409 532 aaPredicted RBP11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 RAB15P59190 212 aa11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 DHX9Q08211 1270 aaKnown RBP11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 INTS6LQ5JSJ4 861 aaKnown RBP11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 CABP1Q9NZU7 370 aa11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 EMILIN1Q9Y6C2 1016 aa11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 USP6P35125 1406 aa11.52□□□□□ -0.57
RBFOX1-213ENST00000551752 TIMP2P16035 220 aa11.51□□□□□ -0.57
RBFOX1-213ENST00000551752 VAC14Q08AM6 782 aa11.51□□□□□ -0.57
RBFOX1-213ENST00000551752 ABTB2Q8N961 1025 aa11.51□□□□□ -0.57
RBFOX1-213ENST00000551752 KLF16Q9BXK1 252 aaPredicted RBP11.51□□□□□ -0.57
RBFOX1-213ENST00000551752 TTC21AQ8NDW8 1320 aa11.51□□□□□ -0.57
RBFOX1-213ENST00000551752 CPSF1Q10570 1443 aaKnown RBP11.51□□□□□ -0.57
RBFOX1-213ENST00000551752 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-213ENST00000551752 ITPKCQ96DU7 683 aa11.5□□□□□ -0.57
RBFOX1-213ENST00000551752 PGPEP1Q9NXJ5 209 aa11.5□□□□□ -0.57
RBFOX1-213ENST00000551752 NINLQ9Y2I6 1382 aa11.5□□□□□ -0.57
RBFOX1-213ENST00000551752 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
RBFOX1-213ENST00000551752 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
RBFOX1-213ENST00000551752 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
RBFOX1-213ENST00000551752 ZFAND3Q9H8U3 227 aa11.49□□□□□ -0.57
RBFOX1-213ENST00000551752 PRDM11Q9NQV5 511 aa11.49□□□□□ -0.57
RBFOX1-213ENST00000551752 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
RBFOX1-213ENST00000551752 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms