RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 RIC1Q4ADV7 1423 aa26.38■■□□□ 1.81
SLC48A1-208ENST00000551301 GNAI1P63096 354 aa26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 FKBP4Q02790 459 aaKnown RBP eCLIP26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 CC2D2BQ6DHV5 1058 aa26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 TMX4Q9H1E5 349 aaPredicted RBP26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 DBF4Q9UBU7 674 aaPredicted RBP26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 DICER1Q9UPY3 1922 aaKnown RBP26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 RNF123Q5XPI4 1314 aa26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 CEP350Q5VT06 3117 aa26.37■■□□□ 1.81
SLC48A1-208ENST00000551301 NTSR2O95665 410 aa26.36■■□□□ 1.81
SLC48A1-208ENST00000551301 KRT24Q2M2I5 525 aa26.36■■□□□ 1.81
SLC48A1-208ENST00000551301 SMC1BQ8NDV3 1235 aa26.36■■□□□ 1.81
SLC48A1-208ENST00000551301 NLRP3Q96P20 1036 aa26.36■■□□□ 1.81
SLC48A1-208ENST00000551301 CHPF2Q9P2E5 772 aa26.36■■□□□ 1.81
SLC48A1-208ENST00000551301 GRIPAP1Q4V328 841 aa26.35■■□□□ 1.81
SLC48A1-208ENST00000551301 CHMP4AQ9BY43 222 aa26.35■■□□□ 1.81
SLC48A1-208ENST00000551301 IFT57Q9NWB7 429 aa26.35■■□□□ 1.81
SLC48A1-208ENST00000551301 HOXA10P31260 410 aaPredicted RBP26.34■■□□□ 1.81
SLC48A1-208ENST00000551301 DUSP27Q5VZP5 1158 aa26.34■■□□□ 1.81
SLC48A1-208ENST00000551301 MBIPQ9NS73 344 aa26.34■■□□□ 1.81
SLC48A1-208ENST00000551301 HYPKQ9NX55 129 aa26.34■■□□□ 1.81
SLC48A1-208ENST00000551301 ZNF316A6NFI3 1004 aaPredicted RBP26.33■■□□□ 1.81
SLC48A1-208ENST00000551301 TCIRG1Q13488 830 aa26.32■■□□□ 1.8
SLC48A1-208ENST00000551301 CRAMP1Q96RY5 1269 aa26.32■■□□□ 1.8
SLC48A1-208ENST00000551301 ANP32CO43423 234 aa26.31■■□□□ 1.8
SLC48A1-208ENST00000551301 SLC10A5Q5PT55 438 aa26.31■■□□□ 1.8
SLC48A1-208ENST00000551301 ZNF277Q9NRM2 450 aaPredicted RBP26.31■■□□□ 1.8
SLC48A1-208ENST00000551301 TRMT112Q9UI30 125 aaKnown RBP26.31■■□□□ 1.8
SLC48A1-208ENST00000551301 ZNF853P0CG23 659 aa26.3■■□□□ 1.8
SLC48A1-208ENST00000551301 ANKRD13DQ6ZTN6 518 aa26.3■■□□□ 1.8
SLC48A1-208ENST00000551301 NLRP10Q86W26 655 aa26.3■■□□□ 1.8
SLC48A1-208ENST00000551301 PLBD2Q8NHP8 589 aa26.3■■□□□ 1.8
SLC48A1-208ENST00000551301 SYNE4Q8N205 404 aa26.29■■□□□ 1.8
SLC48A1-208ENST00000551301 PSMD1Q99460 953 aa26.29■■□□□ 1.8
SLC48A1-208ENST00000551301 PPEF1O14829 653 aaPredicted RBP26.28■■□□□ 1.8
SLC48A1-208ENST00000551301 IARSP41252 1262 aaKnown RBP26.28■■□□□ 1.8
SLC48A1-208ENST00000551301 OLFM4Q6UX06 510 aa26.28■■□□□ 1.8
SLC48A1-208ENST00000551301 JDP2Q8WYK2 163 aa26.28■■□□□ 1.8
SLC48A1-208ENST00000551301 SH3TC1Q8TE82 1336 aa26.28■■□□□ 1.8
SLC48A1-208ENST00000551301 WDR90Q96KV7 1748 aa26.28■■□□□ 1.8
SLC48A1-208ENST00000551301 IQCA1LA6NCM1 817 aa26.27■■□□□ 1.8
SLC48A1-208ENST00000551301 ANKRD36CQ5JPF3 1778 aa26.27■■□□□ 1.8
SLC48A1-208ENST00000551301 DDNO94850 711 aaPredicted RBP26.26■■□□□ 1.79
SLC48A1-208ENST00000551301 GOLGA2Q08379 1002 aa26.25■■□□□ 1.79
SLC48A1-208ENST00000551301 MRS2Q9HD23 443 aa26.25■■□□□ 1.79
SLC48A1-208ENST00000551301 ELL2O00472 640 aaPredicted RBP26.24■■□□□ 1.79
SLC48A1-208ENST00000551301 TCERG1O14776 1098 aaKnown RBP26.24■■□□□ 1.79
SLC48A1-208ENST00000551301 HCLS1P14317 486 aaPredicted RBP26.23■■□□□ 1.79
SLC48A1-208ENST00000551301 C3orf67Q6ZVT6 689 aa26.23■■□□□ 1.79
SLC48A1-208ENST00000551301 DDX46Q7L014 1031 aaKnown RBP26.23■■□□□ 1.79
SLC48A1-208ENST00000551301 RIC3Q7Z5B4 369 aa26.23■■□□□ 1.79
SLC48A1-208ENST00000551301 POTECB2RU33 542 aa26.22■■□□□ 1.79
SLC48A1-208ENST00000551301 BBOX1O75936 387 aa26.22■■□□□ 1.79
SLC48A1-208ENST00000551301 CCDC27Q2M243 656 aa26.21■■□□□ 1.79
SLC48A1-208ENST00000551301 CCDC184Q52MB2 194 aa26.21■■□□□ 1.79
SLC48A1-208ENST00000551301 CCDC30Q5VVM6 783 aa26.21■■□□□ 1.79
SLC48A1-208ENST00000551301 L3MBTL3Q96JM7 780 aaPredicted RBP26.21■■□□□ 1.79
SLC48A1-208ENST00000551301 ATP6V0A2Q9Y487 856 aa26.21■■□□□ 1.79
SLC48A1-208ENST00000551301 HSP90B1P14625 803 aaKnown RBP26.2■■□□□ 1.78
SLC48A1-208ENST00000551301 EIF6P56537 245 aaKnown RBP26.2■■□□□ 1.78
SLC48A1-208ENST00000551301 LARGE2Q8N3Y3 721 aa26.2■■□□□ 1.78
SLC48A1-208ENST00000551301 SUPT20HQ8NEM7 779 aa26.2■■□□□ 1.78
SLC48A1-208ENST00000551301 ABCC4O15439 1325 aa26.19■■□□□ 1.78
SLC48A1-208ENST00000551301 ATP5J2-PTCD1G3V325 749 aa26.19■■□□□ 1.78
SLC48A1-208ENST00000551301 DDX58O95786 925 aaKnown RBP26.19■■□□□ 1.78
SLC48A1-208ENST00000551301 ISCA1Q9BUE6 129 aa26.19■■□□□ 1.78
SLC48A1-208ENST00000551301 FZD9O00144 591 aa26.18■■□□□ 1.78
SLC48A1-208ENST00000551301 CHADLQ6NUI6 762 aa26.18■■□□□ 1.78
SLC48A1-208ENST00000551301 TMC4Q7Z404 712 aa26.18■■□□□ 1.78
SLC48A1-208ENST00000551301 ZNF541Q9H0D2 1346 aa26.17■■□□□ 1.78
SLC48A1-208ENST00000551301 TRIM28Q13263 835 aaKnown RBP26.17■■□□□ 1.78
SLC48A1-208ENST00000551301 GPC2Q8N158 579 aa26.17■■□□□ 1.78
SLC48A1-208ENST00000551301 C8orf58Q8NAV2 365 aa26.17■■□□□ 1.78
SLC48A1-208ENST00000551301 VPS33BQ9H267 617 aa26.17■■□□□ 1.78
SLC48A1-208ENST00000551301 HACL1Q9UJ83 578 aa26.17■■□□□ 1.78
SLC48A1-208ENST00000551301 SCN4AP35499 1836 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 GRAPQ13588 217 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 NCBP3Q53F19 620 aaKnown RBP26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 WWC1Q8IX03 1113 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 SP8Q8IXZ3 490 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 NIM1KQ8IY84 436 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 DNAJC5GQ8N7S2 189 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 GRAPLQ8TC17 118 aaPredicted RBP26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 FAM89AQ96GI7 184 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 STK31Q9BXU1 1019 aa26.16■■□□□ 1.78
SLC48A1-208ENST00000551301 SNED1Q8TER0 1413 aa26.15■■□□□ 1.78
SLC48A1-208ENST00000551301 DPP8Q6V1X1 898 aaPredicted RBP26.15■■□□□ 1.78
SLC48A1-208ENST00000551301 TAF1DQ9H5J8 278 aaPredicted RBP26.15■■□□□ 1.78
SLC48A1-208ENST00000551301 PPIP5K2O43314 1243 aa26.14■■□□□ 1.78
SLC48A1-208ENST00000551301 PNMA8AQ86V59 439 aaPredicted RBP26.14■■□□□ 1.78
SLC48A1-208ENST00000551301 LDHDQ86WU2 507 aa26.14■■□□□ 1.78
SLC48A1-208ENST00000551301 MPNDQ8N594 471 aa26.14■■□□□ 1.78
SLC48A1-208ENST00000551301 PHAXQ9H814 394 aaKnown RBP26.14■■□□□ 1.78
SLC48A1-208ENST00000551301 IL16Q14005 1332 aa26.14■■□□□ 1.77
SLC48A1-208ENST00000551301 LMOD1P29536 600 aaPredicted RBP26.13■■□□□ 1.77
SLC48A1-208ENST00000551301 TSR2Q969E8 191 aaKnown RBP26.13■■□□□ 1.77
SLC48A1-208ENST00000551301 ZNF428Q96B54 188 aa26.13■■□□□ 1.77
SLC48A1-208ENST00000551301 GJA3Q9Y6H8 435 aa26.13■■□□□ 1.77
SLC48A1-208ENST00000551301 HTRA3P83110 453 aa26.12■■□□□ 1.77
SLC48A1-208ENST00000551301 EAPPQ56P03 285 aaPredicted RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms