RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TFIP11Q9UBB9 837 aaKnown RBP6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 DOLKQ9UPQ8 538 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 KIF3AQ9Y496 699 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 PCDHB11Q9Y5F2 797 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 EMILIN1Q9Y6C2 1016 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 PIK3C2GO75747 1445 aa6.48□□□□□ -1.37
LSM3P2-201ENST00000551246 LRRIQ1Q96JM4 1722 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 ABCC10Q5T3U5 1492 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 CCDC66A2RUB6 948 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 CLGNO14967 610 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 SMCPP49901 116 aaPredicted RBP6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 WDR4P57081 412 aaKnown RBP6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 UVSSAQ2YD98 709 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 MAP7D1Q3KQU3 841 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 LRSAM1Q6UWE0 723 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 CRIPAKQ8N1N5 446 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 JARID2Q92833 1246 aaPredicted RBP6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 ADAMTS8Q9UP79 889 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 ABCC5O15440 1437 aa6.47□□□□□ -1.37
LSM3P2-201ENST00000551246 USP17L3A6NCW0 530 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 USP17L4A6NCW7 530 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 E9PSI1 815 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 ZIC2O95409 532 aaPredicted RBP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 PTPRGP23470 1445 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 SSFA2P28290 1259 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 ADD1P35611 737 aaKnown RBP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 NOP2P46087 812 aaKnown RBP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 NCOA4Q13772 614 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 NOLC1Q14978 699 aaKnown RBP eCLIP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 PKDCCQ504Y2 493 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 CEP170Q5SW79 1584 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 AXDND1Q5T1B0 1012 aaPredicted RBP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 USP17L2Q6R6M4 530 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 Q6ZVU0 165 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 USP17L1Q7RTZ2 530 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 KDF1Q8NAX2 398 aaPredicted RBP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 CYLDQ9NQC7 956 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 SLC52A1Q9NWF4 448 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 BICRAQ9NZM4 1560 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 CALCOCO1Q9P1Z2 691 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 FEZ2Q9UHY8 353 aaPredicted RBP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 SERPINA10Q9UK55 444 aa6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 SCAF11Q99590 1463 aaKnown RBP6.46□□□□□ -1.38
LSM3P2-201ENST00000551246 DAPK1P53355 1430 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 ST20-MTHFSA0A0A6YYL1 179 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 BCAR3O75815 825 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 U2AF2P26368 475 aaKnown RBP eCLIP6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 MFAP1P55081 439 aaKnown RBP6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 SRPK2P78362 688 aaKnown RBP6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 CBLBQ13191 982 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 HDAC1Q13547 482 aaPredicted RBP6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 OXLD1Q5BKU9 147 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 CC2D2BQ6DHV5 1058 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 DEPDC4Q8N2C3 294 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 MEIOBQ8N635 442 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 TESK2Q96S53 571 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 CHMP4AQ9BY43 222 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 OSBPL3Q9H4L5 887 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 ADGRL2O95490 1459 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 PLB1Q6P1J6 1458 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 KIF21AQ7Z4S6 1674 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 KDM5DQ9BY66 1539 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 FAM135AQ9P2D6 1515 aa6.45□□□□□ -1.38
LSM3P2-201ENST00000551246 ANKRD50Q9ULJ7 1429 aa6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 DNMT1P26358 1616 aaKnown RBP6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 CTC1Q2NKJ3 1217 aa6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 GPT2Q8TD30 523 aa6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 ZNF622Q969S3 477 aaKnown RBP eCLIP6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 CCDC97Q96F63 343 aaPredicted RBP6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 RWDD1Q9H446 243 aaPredicted RBP6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 DDX49Q9Y6V7 483 aaKnown RBP6.44□□□□□ -1.38
LSM3P2-201ENST00000551246 GOLGA6L22H0YM25 854 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 K7ELQ4 463 aaPredicted RBP6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 ST8SIA5O15466 376 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 CAPN5O15484 640 aaPredicted RBP6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 LZTS3O60299 673 aaPredicted RBP6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 CDK11BP21127 795 aaKnown RBP6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 PPP2R1AP30153 589 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 NUCB2P80303 420 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 NCBP1Q09161 790 aaKnown RBP6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 EML3Q32P44 896 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 CDCA8Q53HL2 280 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 MUM1L1Q5H9M0 696 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 ZNF771Q7L3S4 317 aaPredicted RBP6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 GAS2L2Q8NHY3 880 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 KIAA1524Q8TCG1 905 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 AAASQ9NRG9 546 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 SYNMO15061 1565 aa6.43□□□□□ -1.38
LSM3P2-201ENST00000551246 UNC13AQ9UPW8 1703 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 REC8O95072 547 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 ADH1AP07327 375 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 LMOD1P29536 600 aaPredicted RBP6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 CYP2C19P33261 490 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 KIF18AQ8NI77 898 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 PANK1Q8TE04 598 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 SIRT1Q96EB6 747 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 KIF1BPQ96EK5 621 aa6.42□□□□□ -1.38
LSM3P2-201ENST00000551246 CARD11Q9BXL7 1154 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms