RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 CRY2Q49AN0 593 aa13.8□□□□□ -0.2
BEST3-210ENST00000551160 NBPF10Q6P3W6 841 aaKnown RBP13.8□□□□□ -0.2
BEST3-210ENST00000551160 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
BEST3-210ENST00000551160 NBPF15Q8N660 670 aa13.8□□□□□ -0.2
BEST3-210ENST00000551160 PDE4DIPQ5VU43 2346 aa13.8□□□□□ -0.2
BEST3-210ENST00000551160 BRPF1P55201 1214 aaPredicted RBP13.79□□□□□ -0.2
BEST3-210ENST00000551160 HLFQ16534 295 aa13.79□□□□□ -0.2
BEST3-210ENST00000551160 CIAPIN1Q6FI81 312 aa13.79□□□□□ -0.2
BEST3-210ENST00000551160 NUTM1Q86Y26 1132 aa13.79□□□□□ -0.2
BEST3-210ENST00000551160 GLIS2Q9BZE0 524 aaPredicted RBP13.79□□□□□ -0.2
BEST3-210ENST00000551160 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
BEST3-210ENST00000551160 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
BEST3-210ENST00000551160 ZIC5Q96T25 663 aa13.78□□□□□ -0.2
BEST3-210ENST00000551160 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
BEST3-210ENST00000551160 TCERG1O14776 1098 aaKnown RBP13.77□□□□□ -0.21
BEST3-210ENST00000551160 SNRPA1P09661 255 aaKnown RBP13.77□□□□□ -0.21
BEST3-210ENST00000551160 SOX10P56693 466 aa13.77□□□□□ -0.21
BEST3-210ENST00000551160 CC2D2BQ6DHV5 1058 aa13.77□□□□□ -0.21
BEST3-210ENST00000551160 NIM1KQ8IY84 436 aa13.77□□□□□ -0.21
BEST3-210ENST00000551160 ZNF408Q9H9D4 720 aa13.77□□□□□ -0.21
BEST3-210ENST00000551160 ADARB2Q9NS39 739 aaKnown RBP13.77□□□□□ -0.21
BEST3-210ENST00000551160 GPRC5DQ9NZD1 345 aa13.77□□□□□ -0.21
BEST3-210ENST00000551160 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
BEST3-210ENST00000551160 RGL2O15211 777 aa13.76□□□□□ -0.21
BEST3-210ENST00000551160 CC2D1BQ5T0F9 858 aaKnown RBP13.76□□□□□ -0.21
BEST3-210ENST00000551160 HHIPL1Q96JK4 782 aa13.76□□□□□ -0.21
BEST3-210ENST00000551160 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
BEST3-210ENST00000551160 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
BEST3-210ENST00000551160 PPIP5K2O43314 1243 aa13.75□□□□□ -0.21
BEST3-210ENST00000551160 GMPSP49915 693 aaPredicted RBP13.75□□□□□ -0.21
BEST3-210ENST00000551160 AOC3Q16853 763 aa13.75□□□□□ -0.21
BEST3-210ENST00000551160 RPGRQ92834 1020 aaKnown RBP13.75□□□□□ -0.21
BEST3-210ENST00000551160 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
BEST3-210ENST00000551160 PPEF1O14829 653 aaPredicted RBP13.74□□□□□ -0.21
BEST3-210ENST00000551160 HOXA10P31260 410 aaPredicted RBP13.74□□□□□ -0.21
BEST3-210ENST00000551160 C3orf67Q6ZVT6 689 aa13.74□□□□□ -0.21
BEST3-210ENST00000551160 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
BEST3-210ENST00000551160 PRKAR2BP31323 418 aa13.73□□□□□ -0.21
BEST3-210ENST00000551160 HIRAP54198 1017 aaPredicted RBP13.73□□□□□ -0.21
BEST3-210ENST00000551160 CXCL9Q07325 125 aa13.73□□□□□ -0.21
BEST3-210ENST00000551160 MCM10Q7L590 875 aa13.73□□□□□ -0.21
BEST3-210ENST00000551160 TRPM4Q8TD43 1214 aa13.73□□□□□ -0.21
BEST3-210ENST00000551160 NYXQ9GZU5 481 aa13.73□□□□□ -0.21
BEST3-210ENST00000551160 CASP8AP2Q9UKL3 1982 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 UBN2Q6ZU65 1347 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 SHTN1A0MZ66 631 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 GPTP24298 496 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 NOGQ13253 232 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 DLK2Q6UY11 383 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
BEST3-210ENST00000551160 PGAP2Q9UHJ9 254 aa13.72□□□□□ -0.21
BEST3-210ENST00000551160 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
BEST3-210ENST00000551160 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
BEST3-210ENST00000551160 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.21
BEST3-210ENST00000551160 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
BEST3-210ENST00000551160 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
BEST3-210ENST00000551160 ZNRF3Q9ULT6 936 aa13.71□□□□□ -0.21
BEST3-210ENST00000551160 TRPM7Q96QT4 1865 aa13.7□□□□□ -0.22
BEST3-210ENST00000551160 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
BEST3-210ENST00000551160 HUNKP57058 714 aa13.7□□□□□ -0.22
BEST3-210ENST00000551160 DCTN1Q14203 1278 aa13.7□□□□□ -0.22
BEST3-210ENST00000551160 PRPF38BQ5VTL8 546 aaKnown RBP13.7□□□□□ -0.22
BEST3-210ENST00000551160 SUSD4Q5VX71 490 aa13.7□□□□□ -0.22
BEST3-210ENST00000551160 TTLL7Q6ZT98 887 aa13.7□□□□□ -0.22
BEST3-210ENST00000551160 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
BEST3-210ENST00000551160 RAD17O75943 681 aa13.69□□□□□ -0.22
BEST3-210ENST00000551160 CDC37L1Q7L3B6 337 aa13.69□□□□□ -0.22
BEST3-210ENST00000551160 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
BEST3-210ENST00000551160 ZC3H15Q8WU90 426 aaKnown RBP13.69□□□□□ -0.22
BEST3-210ENST00000551160 IBTKQ9P2D0 1353 aaPredicted RBP13.69□□□□□ -0.22
BEST3-210ENST00000551160 FAM155AB1AL88 458 aaPredicted RBP13.68□□□□□ -0.22
BEST3-210ENST00000551160 ERVV-1B6SEH8 477 aa13.68□□□□□ -0.22
BEST3-210ENST00000551160 NTSR2O95665 410 aa13.68□□□□□ -0.22
BEST3-210ENST00000551160 RTF1Q92541 710 aaKnown RBP13.68□□□□□ -0.22
BEST3-210ENST00000551160 BCL2L13Q9BXK5 485 aa13.68□□□□□ -0.22
BEST3-210ENST00000551160 ZBTB3Q9H5J0 574 aa13.68□□□□□ -0.22
BEST3-210ENST00000551160 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
BEST3-210ENST00000551160 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
BEST3-210ENST00000551160 CDHR2Q9BYE9 1310 aa13.67□□□□□ -0.22
BEST3-210ENST00000551160 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
BEST3-210ENST00000551160 RTFDC1Q9BY42 306 aaPredicted RBP13.67□□□□□ -0.22
BEST3-210ENST00000551160 SAGE1Q9NXZ1 904 aa13.67□□□□□ -0.22
BEST3-210ENST00000551160 ABCC4O15439 1325 aa13.66□□□□□ -0.22
BEST3-210ENST00000551160 TRPA1O75762 1119 aa13.66□□□□□ -0.22
BEST3-210ENST00000551160 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
BEST3-210ENST00000551160 RGMBQ6NW40 437 aa13.66□□□□□ -0.22
BEST3-210ENST00000551160 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
BEST3-210ENST00000551160 VPS33BQ9H267 617 aa13.66□□□□□ -0.22
BEST3-210ENST00000551160 RNF186Q9NXI6 227 aa13.66□□□□□ -0.22
BEST3-210ENST00000551160 CNOT7Q9UIV1 285 aaKnown RBP13.66□□□□□ -0.22
BEST3-210ENST00000551160 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
BEST3-210ENST00000551160 YDJCA8MPS7 323 aa13.65□□□□□ -0.22
BEST3-210ENST00000551160 KIAA2012Q0VF49 1180 aa13.65□□□□□ -0.22
BEST3-210ENST00000551160 DPP8Q6V1X1 898 aaPredicted RBP13.65□□□□□ -0.22
BEST3-210ENST00000551160 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
BEST3-210ENST00000551160 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
BEST3-210ENST00000551160 TMX4Q9H1E5 349 aaPredicted RBP13.65□□□□□ -0.22
BEST3-210ENST00000551160 GBA2Q9HCG7 927 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms