RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
GPN3-208ENST00000550974 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
GPN3-208ENST00000550974 GMPSP49915 693 aaPredicted RBP15.61■□□□□ 0.09
GPN3-208ENST00000550974 C2orf69Q8N8R5 385 aa15.61■□□□□ 0.09
GPN3-208ENST00000550974 GBA2Q9HCG7 927 aaPredicted RBP15.61■□□□□ 0.09
GPN3-208ENST00000550974 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
GPN3-208ENST00000550974 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
GPN3-208ENST00000550974 TBC1D8O95759 1140 aa15.6■□□□□ 0.09
GPN3-208ENST00000550974 AKAP11Q9UKA4 1901 aa15.59■□□□□ 0.09
GPN3-208ENST00000550974 SLC10A3P09131 477 aa15.59■□□□□ 0.09
GPN3-208ENST00000550974 IL6STP40189 918 aaPredicted RBP15.59■□□□□ 0.09
GPN3-208ENST00000550974 TRPM4Q8TD43 1214 aa15.59■□□□□ 0.09
GPN3-208ENST00000550974 FAM177BA6PVY3 158 aa15.58■□□□□ 0.08
GPN3-208ENST00000550974 CC2D2BQ6DHV5 1058 aa15.58■□□□□ 0.08
GPN3-208ENST00000550974 BCL2L13Q9BXK5 485 aa15.58■□□□□ 0.08
GPN3-208ENST00000550974 NPC1L1Q9UHC9 1359 aa15.58■□□□□ 0.08
GPN3-208ENST00000550974 PPIP5K2O43314 1243 aa15.57■□□□□ 0.08
GPN3-208ENST00000550974 CXCL9Q07325 125 aa15.57■□□□□ 0.08
GPN3-208ENST00000550974 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
GPN3-208ENST00000550974 DZIP3Q86Y13 1208 aaKnown RBP15.57■□□□□ 0.08
GPN3-208ENST00000550974 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
GPN3-208ENST00000550974 RNMTO43148 476 aaKnown RBP15.56■□□□□ 0.08
GPN3-208ENST00000550974 AOC3Q16853 763 aa15.56■□□□□ 0.08
GPN3-208ENST00000550974 TCERG1O14776 1098 aaKnown RBP15.55■□□□□ 0.08
GPN3-208ENST00000550974 A1BGP04217 495 aa15.55■□□□□ 0.08
GPN3-208ENST00000550974 SULT6B1Q6IMI4 303 aa15.55■□□□□ 0.08
GPN3-208ENST00000550974 TTC5Q8N0Z6 440 aa15.55■□□□□ 0.08
GPN3-208ENST00000550974 SHTN1A0MZ66 631 aa15.54■□□□□ 0.08
GPN3-208ENST00000550974 GPR25O00155 361 aa15.54■□□□□ 0.08
GPN3-208ENST00000550974 KRT26Q7Z3Y9 468 aa15.54■□□□□ 0.08
GPN3-208ENST00000550974 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
GPN3-208ENST00000550974 ZNRF3Q9ULT6 936 aa15.54■□□□□ 0.08
GPN3-208ENST00000550974 MKI67P46013 3256 aaKnown RBP15.53■□□□□ 0.08
GPN3-208ENST00000550974 PITPNM2Q9BZ72 1349 aa15.53■□□□□ 0.08
GPN3-208ENST00000550974 SZT2Q5T011 3432 aa15.53■□□□□ 0.08
GPN3-208ENST00000550974 ADM5C9JUS6 153 aa15.53■□□□□ 0.08
GPN3-208ENST00000550974 EN2P19622 333 aaPredicted RBP15.53■□□□□ 0.08
GPN3-208ENST00000550974 GTF2E1P29083 439 aaPredicted RBP15.53■□□□□ 0.08
GPN3-208ENST00000550974 GRIPAP1Q4V328 841 aa15.53■□□□□ 0.08
GPN3-208ENST00000550974 INTS3Q68E01 1043 aaKnown RBP15.53■□□□□ 0.08
GPN3-208ENST00000550974 CNOT7Q9UIV1 285 aaKnown RBP15.53■□□□□ 0.08
GPN3-208ENST00000550974 MRC1P22897 1456 aa15.52■□□□□ 0.08
GPN3-208ENST00000550974 H7C1D1 291 aa15.52■□□□□ 0.08
GPN3-208ENST00000550974 MNX1P50219 401 aaPredicted RBP15.52■□□□□ 0.08
GPN3-208ENST00000550974 RASAL3Q86YV0 1011 aa15.52■□□□□ 0.08
GPN3-208ENST00000550974 OTUD5Q96G74 571 aa15.52■□□□□ 0.08
GPN3-208ENST00000550974 TEX13AQ9BXU3 409 aaPredicted RBP15.52■□□□□ 0.08
GPN3-208ENST00000550974 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.08
GPN3-208ENST00000550974 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.08
GPN3-208ENST00000550974 CDHR2Q9BYE9 1310 aa15.51■□□□□ 0.07
GPN3-208ENST00000550974 CLEC4GQ6UXB4 293 aa15.51■□□□□ 0.07
GPN3-208ENST00000550974 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
GPN3-208ENST00000550974 H0YGN5 161 aa15.5■□□□□ 0.07
GPN3-208ENST00000550974 RAD17O75943 681 aa15.5■□□□□ 0.07
GPN3-208ENST00000550974 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
GPN3-208ENST00000550974 MICALL2Q8IY33 904 aa15.5■□□□□ 0.07
GPN3-208ENST00000550974 HEG1Q9ULI3 1381 aa15.49■□□□□ 0.07
GPN3-208ENST00000550974 FKTNO75072 461 aa15.49■□□□□ 0.07
GPN3-208ENST00000550974 PIP4K2AP48426 406 aaPredicted RBP15.49■□□□□ 0.07
GPN3-208ENST00000550974 TNIP1Q15025 636 aa15.49■□□□□ 0.07
GPN3-208ENST00000550974 SAMD7Q7Z3H4 446 aa15.49■□□□□ 0.07
GPN3-208ENST00000550974 RPGRQ92834 1020 aaKnown RBP15.49■□□□□ 0.07
GPN3-208ENST00000550974 DCPSQ96C86 337 aaKnown RBP15.49■□□□□ 0.07
GPN3-208ENST00000550974 PPEF1O14829 653 aaPredicted RBP15.48■□□□□ 0.07
GPN3-208ENST00000550974 CRY2Q49AN0 593 aa15.48■□□□□ 0.07
GPN3-208ENST00000550974 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
GPN3-208ENST00000550974 TBC1D10BQ4KMP7 808 aaPredicted RBP15.47■□□□□ 0.07
GPN3-208ENST00000550974 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
GPN3-208ENST00000550974 VPS33BQ9H267 617 aa15.47■□□□□ 0.07
GPN3-208ENST00000550974 RBM27Q9P2N5 1060 aaKnown RBP15.47■□□□□ 0.07
GPN3-208ENST00000550974 TRIM17Q9Y577 477 aa15.47■□□□□ 0.07
GPN3-208ENST00000550974 PAPPA2Q9BXP8 1791 aa15.47■□□□□ 0.07
GPN3-208ENST00000550974 RBM26Q5T8P6 1007 aaKnown RBP15.46■□□□□ 0.07
GPN3-208ENST00000550974 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
GPN3-208ENST00000550974 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
GPN3-208ENST00000550974 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
GPN3-208ENST00000550974 EGFRP00533 1210 aa15.45■□□□□ 0.06
GPN3-208ENST00000550974 CDCA8Q53HL2 280 aa15.45■□□□□ 0.06
GPN3-208ENST00000550974 ZNF790Q6PG37 636 aa15.45■□□□□ 0.06
GPN3-208ENST00000550974 HOXA10P31260 410 aaPredicted RBP15.44■□□□□ 0.06
GPN3-208ENST00000550974 SUPT20HQ8NEM7 779 aa15.44■□□□□ 0.06
GPN3-208ENST00000550974 CDCA5Q96FF9 252 aa15.44■□□□□ 0.06
GPN3-208ENST00000550974 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
GPN3-208ENST00000550974 R3HDMLQ9H3Y0 253 aa15.44■□□□□ 0.06
GPN3-208ENST00000550974 ABCC12Q96J65 1359 aa15.44■□□□□ 0.06
GPN3-208ENST00000550974 SULF1Q8IWU6 871 aa15.43■□□□□ 0.06
GPN3-208ENST00000550974 FMNL2Q96PY5 1086 aa15.43■□□□□ 0.06
GPN3-208ENST00000550974 PRAMEF22A3QJZ6 481 aa15.42■□□□□ 0.06
GPN3-208ENST00000550974 TM4SF4P48230 202 aa15.42■□□□□ 0.06
GPN3-208ENST00000550974 MTHFSDQ2M296 383 aaKnown RBP15.42■□□□□ 0.06
GPN3-208ENST00000550974 OTOP1Q7RTM1 612 aa15.42■□□□□ 0.06
GPN3-208ENST00000550974 CRAMP1Q96RY5 1269 aa15.42■□□□□ 0.06
GPN3-208ENST00000550974 TMEM106CQ9BVX2 250 aa15.42■□□□□ 0.06
GPN3-208ENST00000550974 YDJCA8MPS7 323 aa15.41■□□□□ 0.06
GPN3-208ENST00000550974 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
GPN3-208ENST00000550974 COL25A1Q9BXS0 654 aaPredicted RBP15.41■□□□□ 0.06
GPN3-208ENST00000550974 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
GPN3-208ENST00000550974 KIF7Q2M1P5 1343 aa15.41■□□□□ 0.06
GPN3-208ENST00000550974 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
GPN3-208ENST00000550974 TEFQ10587 303 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms