RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 SOGA3Q5TF21 947 aa17.4■□□□□ 0.38
CR383656.13-201ENST00000550928 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
CR383656.13-201ENST00000550928 CHMP4AQ9BY43 222 aa17.4■□□□□ 0.38
CR383656.13-201ENST00000550928 IL16Q14005 1332 aa17.4■□□□□ 0.38
CR383656.13-201ENST00000550928 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
CR383656.13-201ENST00000550928 KIF3CO14782 793 aa17.39■□□□□ 0.37
CR383656.13-201ENST00000550928 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
CR383656.13-201ENST00000550928 WDR63Q8IWG1 891 aa17.39■□□□□ 0.37
CR383656.13-201ENST00000550928 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
CR383656.13-201ENST00000550928 TSR2Q969E8 191 aaKnown RBP17.39■□□□□ 0.37
CR383656.13-201ENST00000550928 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
CR383656.13-201ENST00000550928 CCDC88AQ3V6T2 1871 aa17.38■□□□□ 0.37
CR383656.13-201ENST00000550928 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
CR383656.13-201ENST00000550928 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
CR383656.13-201ENST00000550928 PHAXQ9H814 394 aaKnown RBP17.38■□□□□ 0.37
CR383656.13-201ENST00000550928 LTBP3Q9NS15 1303 aa17.38■□□□□ 0.37
CR383656.13-201ENST00000550928 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
CR383656.13-201ENST00000550928 CACNB1Q02641 598 aaPredicted RBP17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 NMRK2Q9NPI5 230 aa17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 RNF123Q5XPI4 1314 aa17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 ZC3H4Q9UPT8 1303 aaKnown RBP17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 FER1L6Q2WGJ9 1857 aa17.37■□□□□ 0.37
CR383656.13-201ENST00000550928 CACNA1SQ13698 1873 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 CCDC93Q567U6 631 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 C3orf67Q6ZVT6 689 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 CRAMP1Q96RY5 1269 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 TAOK3Q9H2K8 898 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
CR383656.13-201ENST00000550928 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
CR383656.13-201ENST00000550928 TRIM28Q13263 835 aaKnown RBP17.35■□□□□ 0.37
CR383656.13-201ENST00000550928 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
CR383656.13-201ENST00000550928 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
CR383656.13-201ENST00000550928 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
CR383656.13-201ENST00000550928 ATP5J2-PTCD1G3V325 749 aa17.34■□□□□ 0.37
CR383656.13-201ENST00000550928 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
CR383656.13-201ENST00000550928 RRAGCQ9HB90 399 aa17.34■□□□□ 0.37
CR383656.13-201ENST00000550928 TNRC6CQ9HCJ0 1690 aaKnown RBP17.34■□□□□ 0.37
CR383656.13-201ENST00000550928 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.37
CR383656.13-201ENST00000550928 SH3TC1Q8TE82 1336 aa17.33■□□□□ 0.36
CR383656.13-201ENST00000550928 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.36
CR383656.13-201ENST00000550928 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
CR383656.13-201ENST00000550928 TWISTNBQ3B726 338 aaPredicted RBP17.33■□□□□ 0.36
CR383656.13-201ENST00000550928 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
CR383656.13-201ENST00000550928 TOMM70O94826 608 aa17.32■□□□□ 0.36
CR383656.13-201ENST00000550928 DPY19L2Q6NUT2 758 aa17.32■□□□□ 0.36
CR383656.13-201ENST00000550928 ZNF428Q96B54 188 aa17.32■□□□□ 0.36
CR383656.13-201ENST00000550928 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
CR383656.13-201ENST00000550928 TCERG1O14776 1098 aaKnown RBP17.31■□□□□ 0.36
CR383656.13-201ENST00000550928 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
CR383656.13-201ENST00000550928 FAM89AQ96GI7 184 aa17.31■□□□□ 0.36
CR383656.13-201ENST00000550928 STK31Q9BXU1 1019 aa17.31■□□□□ 0.36
CR383656.13-201ENST00000550928 VAMP4O75379 141 aa17.3■□□□□ 0.36
CR383656.13-201ENST00000550928 BBOX1O75936 387 aa17.3■□□□□ 0.36
CR383656.13-201ENST00000550928 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
CR383656.13-201ENST00000550928 GRIPAP1Q4V328 841 aa17.3■□□□□ 0.36
CR383656.13-201ENST00000550928 MYD88Q99836 296 aa17.3■□□□□ 0.36
CR383656.13-201ENST00000550928 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
CR383656.13-201ENST00000550928 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
CR383656.13-201ENST00000550928 KSR2Q6VAB6 950 aa17.29■□□□□ 0.36
CR383656.13-201ENST00000550928 PSMD1Q99460 953 aa17.29■□□□□ 0.36
CR383656.13-201ENST00000550928 METTL22Q9BUU2 404 aaPredicted RBP17.29■□□□□ 0.36
CR383656.13-201ENST00000550928 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
CR383656.13-201ENST00000550928 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 SF3B3Q15393 1217 aaKnown RBP17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
CR383656.13-201ENST00000550928 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.36
CR383656.13-201ENST00000550928 POTECB2RU33 542 aa17.27■□□□□ 0.36
CR383656.13-201ENST00000550928 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
CR383656.13-201ENST00000550928 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
CR383656.13-201ENST00000550928 G2E3Q7L622 706 aa17.27■□□□□ 0.36
CR383656.13-201ENST00000550928 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.36
CR383656.13-201ENST00000550928 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
CR383656.13-201ENST00000550928 ABCC4O15439 1325 aa17.26■□□□□ 0.35
CR383656.13-201ENST00000550928 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
CR383656.13-201ENST00000550928 SP8Q8IXZ3 490 aa17.26■□□□□ 0.35
CR383656.13-201ENST00000550928 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
CR383656.13-201ENST00000550928 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
CR383656.13-201ENST00000550928 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
CR383656.13-201ENST00000550928 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
CR383656.13-201ENST00000550928 LAMB2P55268 1798 aa17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 DDNO94850 711 aaPredicted RBP17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 PCCAP05165 728 aaPredicted RBP17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 HSPA6P17066 643 aa17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 GRAPQ13588 217 aa17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 GRAPLQ8TC17 118 aaPredicted RBP17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 CWC25Q9NXE8 425 aaPredicted RBP17.25■□□□□ 0.35
CR383656.13-201ENST00000550928 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms