RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 DIAPH3Q9NSV4 1193 aa17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 PARP4Q9UKK3 1724 aaKnown RBP17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 ADCK5Q3MIX3 580 aa17.14■□□□□ 0.33
CALCOCO1-218ENST00000550804 FAM227BQ96M60 508 aa17.14■□□□□ 0.33
CALCOCO1-218ENST00000550804 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
CALCOCO1-218ENST00000550804 ZSCAN23Q3MJ62 389 aa17.14■□□□□ 0.33
CALCOCO1-218ENST00000550804 GDPD2Q9HCC8 539 aa17.14■□□□□ 0.33
CALCOCO1-218ENST00000550804 AK2P54819 239 aa17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 TTC5Q8N0Z6 440 aa17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 RUFY3Q7L099 469 aa17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 EDC3Q96F86 508 aaKnown RBP17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 TTC14Q96N46 770 aa17.13■□□□□ 0.33
CALCOCO1-218ENST00000550804 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
CALCOCO1-218ENST00000550804 ERC1Q8IUD2 1116 aa17.12■□□□□ 0.33
CALCOCO1-218ENST00000550804 INTS4Q96HW7 963 aaKnown RBP17.12■□□□□ 0.33
CALCOCO1-218ENST00000550804 NDUFB9Q9Y6M9 179 aa17.12■□□□□ 0.33
CALCOCO1-218ENST00000550804 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
CALCOCO1-218ENST00000550804 CASTP20810 708 aaKnown RBP17.12■□□□□ 0.33
CALCOCO1-218ENST00000550804 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
CALCOCO1-218ENST00000550804 UBE3BQ7Z3V4 1068 aa17.11■□□□□ 0.33
CALCOCO1-218ENST00000550804 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
CALCOCO1-218ENST00000550804 TMEM63CQ9P1W3 806 aa17.11■□□□□ 0.33
CALCOCO1-218ENST00000550804 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
CALCOCO1-218ENST00000550804 LARGE1O95461 756 aa17.1■□□□□ 0.33
CALCOCO1-218ENST00000550804 CHGBP05060 677 aa17.1■□□□□ 0.33
CALCOCO1-218ENST00000550804 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
CALCOCO1-218ENST00000550804 COL22A1Q8NFW1 1626 aaPredicted RBP17.1■□□□□ 0.33
CALCOCO1-218ENST00000550804 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
CALCOCO1-218ENST00000550804 TPRNQ4KMQ1 711 aa17.1■□□□□ 0.33
CALCOCO1-218ENST00000550804 HDAC5Q9UQL6 1122 aa17.1■□□□□ 0.33
CALCOCO1-218ENST00000550804 C5P01031 1676 aa17.09■□□□□ 0.33
CALCOCO1-218ENST00000550804 NMIQ13287 307 aaPredicted RBP17.09■□□□□ 0.33
CALCOCO1-218ENST00000550804 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
CALCOCO1-218ENST00000550804 EPB41L2O43491 1005 aaKnown RBP17.09■□□□□ 0.33
CALCOCO1-218ENST00000550804 JAKMIP1Q96N16 626 aaKnown RBP17.09■□□□□ 0.33
CALCOCO1-218ENST00000550804 TAF6LQ9Y6J9 622 aa17.09■□□□□ 0.33
CALCOCO1-218ENST00000550804 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.33
CALCOCO1-218ENST00000550804 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.33
CALCOCO1-218ENST00000550804 RBSNQ9H1K0 784 aa17.08■□□□□ 0.33
CALCOCO1-218ENST00000550804 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.33
CALCOCO1-218ENST00000550804 COL14A1Q05707 1796 aaKnown RBP17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 A0A087WZG4 1122 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 A0A0D9SFI3 127 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 GADD45BO75293 160 aaPredicted RBP17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 NECTIN1Q15223 517 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.32
CALCOCO1-218ENST00000550804 ERBB4Q15303 1308 aa17.07■□□□□ 0.32
CALCOCO1-218ENST00000550804 ZNF445P59923 1031 aa17.07■□□□□ 0.32
CALCOCO1-218ENST00000550804 TFCP2Q12800 502 aa17.07■□□□□ 0.32
CALCOCO1-218ENST00000550804 COL16A1Q07092 1604 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO1-218ENST00000550804 SYCE3A1L190 88 aa17.07■□□□□ 0.32
CALCOCO1-218ENST00000550804 RFX5P48382 616 aaPredicted RBP17.07■□□□□ 0.32
CALCOCO1-218ENST00000550804 A1BGP04217 495 aa17.06■□□□□ 0.32
CALCOCO1-218ENST00000550804 PIP4K2BP78356 416 aa17.06■□□□□ 0.32
CALCOCO1-218ENST00000550804 TCEANC2Q96MN5 208 aa17.06■□□□□ 0.32
CALCOCO1-218ENST00000550804 FSD1Q9BTV5 496 aa17.06■□□□□ 0.32
CALCOCO1-218ENST00000550804 RBM8AQ9Y5S9 174 aaKnown RBP17.06■□□□□ 0.32
CALCOCO1-218ENST00000550804 TTLL7Q6ZT98 887 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 PDRG1Q9NUG6 133 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 TOM1O60784 492 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 CCDC83Q8IWF9 413 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 CCDC171Q6TFL3 1326 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 GLI3P10071 1580 aa17.05■□□□□ 0.32
CALCOCO1-218ENST00000550804 SYT1P21579 422 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 KCNJ4P48050 445 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 CREB3L3Q68CJ9 461 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 RPAP1Q9BWH6 1393 aaPredicted RBP17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 LMBR1LQ6UX01 489 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
CALCOCO1-218ENST00000550804 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
CALCOCO1-218ENST00000550804 CASP7P55210 303 aa17.03■□□□□ 0.32
CALCOCO1-218ENST00000550804 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
CALCOCO1-218ENST00000550804 TNNI3KQ59H18 835 aa17.03■□□□□ 0.32
CALCOCO1-218ENST00000550804 DBNDD2Q9BQY9 259 aa17.03■□□□□ 0.32
CALCOCO1-218ENST00000550804 FPGT-TNNI3KV9GXZ4 949 aa17.03■□□□□ 0.32
CALCOCO1-218ENST00000550804 SLC27A2O14975 620 aa17.02■□□□□ 0.32
CALCOCO1-218ENST00000550804 ME3Q16798 604 aa17.02■□□□□ 0.32
CALCOCO1-218ENST00000550804 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms