RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 HCLS1P14317 486 aaPredicted RBP17.55■□□□□ 0.4
TROAP-213ENST00000550709 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
TROAP-213ENST00000550709 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
TROAP-213ENST00000550709 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
TROAP-213ENST00000550709 UTRNP46939 3433 aa17.54■□□□□ 0.4
TROAP-213ENST00000550709 F6X3S4 739 aa17.54■□□□□ 0.4
TROAP-213ENST00000550709 SRGNP10124 158 aa17.54■□□□□ 0.4
TROAP-213ENST00000550709 NEXNQ0ZGT2 675 aa17.54■□□□□ 0.4
TROAP-213ENST00000550709 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
TROAP-213ENST00000550709 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
TROAP-213ENST00000550709 JARID2Q92833 1246 aaPredicted RBP17.54■□□□□ 0.4
TROAP-213ENST00000550709 FAM89AQ96GI7 184 aa17.54■□□□□ 0.4
TROAP-213ENST00000550709 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
TROAP-213ENST00000550709 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
TROAP-213ENST00000550709 SH3TC1Q8TE82 1336 aa17.53■□□□□ 0.4
TROAP-213ENST00000550709 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
TROAP-213ENST00000550709 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
TROAP-213ENST00000550709 MASTLQ96GX5 879 aa17.53■□□□□ 0.4
TROAP-213ENST00000550709 NRXN2Q9P2S2 1712 aa17.52■□□□□ 0.4
TROAP-213ENST00000550709 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
TROAP-213ENST00000550709 AFDNP55196 1824 aaKnown RBP17.52■□□□□ 0.4
TROAP-213ENST00000550709 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
TROAP-213ENST00000550709 IGKV5-2P06315 115 aa17.52■□□□□ 0.4
TROAP-213ENST00000550709 NPR1P16066 1061 aa17.52■□□□□ 0.4
TROAP-213ENST00000550709 CWF19L2Q2TBE0 894 aaKnown RBP17.52■□□□□ 0.4
TROAP-213ENST00000550709 STYK1Q6J9G0 422 aa17.52■□□□□ 0.4
TROAP-213ENST00000550709 DNAAF4Q8WXU2 420 aa17.52■□□□□ 0.4
TROAP-213ENST00000550709 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.4
TROAP-213ENST00000550709 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
TROAP-213ENST00000550709 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
TROAP-213ENST00000550709 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
TROAP-213ENST00000550709 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
TROAP-213ENST00000550709 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
TROAP-213ENST00000550709 NLRP3Q96P20 1036 aa17.51■□□□□ 0.39
TROAP-213ENST00000550709 RNF123Q5XPI4 1314 aa17.5■□□□□ 0.39
TROAP-213ENST00000550709 CT47B1P0C2W7 299 aaPredicted RBP17.5■□□□□ 0.39
TROAP-213ENST00000550709 PRPF40BQ6NWY9 871 aaKnown RBP17.5■□□□□ 0.39
TROAP-213ENST00000550709 SLC4A10Q6U841 1118 aa17.5■□□□□ 0.39
TROAP-213ENST00000550709 ZBTB38Q8NAP3 1195 aaPredicted RBP17.5■□□□□ 0.39
TROAP-213ENST00000550709 NUP98P52948 1817 aa17.49■□□□□ 0.39
TROAP-213ENST00000550709 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
TROAP-213ENST00000550709 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
TROAP-213ENST00000550709 IRS4O14654 1257 aaPredicted RBP17.49■□□□□ 0.39
TROAP-213ENST00000550709 C21orf2O43822 256 aa17.49■□□□□ 0.39
TROAP-213ENST00000550709 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
TROAP-213ENST00000550709 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
TROAP-213ENST00000550709 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
TROAP-213ENST00000550709 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
TROAP-213ENST00000550709 YY1P25490 414 aa17.47■□□□□ 0.39
TROAP-213ENST00000550709 RARSP54136 660 aaKnown RBP17.47■□□□□ 0.39
TROAP-213ENST00000550709 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
TROAP-213ENST00000550709 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
TROAP-213ENST00000550709 KIAA1551Q9HCM1 1747 aa17.47■□□□□ 0.39
TROAP-213ENST00000550709 ALDH1B1P30837 517 aa17.46■□□□□ 0.39
TROAP-213ENST00000550709 GCKRQ14397 625 aa17.46■□□□□ 0.39
TROAP-213ENST00000550709 BEND3Q5T5X7 828 aa17.46■□□□□ 0.39
TROAP-213ENST00000550709 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
TROAP-213ENST00000550709 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
TROAP-213ENST00000550709 UBE3BQ7Z3V4 1068 aa17.45■□□□□ 0.38
TROAP-213ENST00000550709 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
TROAP-213ENST00000550709 NOB1Q9ULX3 412 aaKnown RBP17.45■□□□□ 0.38
TROAP-213ENST00000550709 PTPRCP08575 1304 aa17.45■□□□□ 0.38
TROAP-213ENST00000550709 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
TROAP-213ENST00000550709 RASSF7Q02833 373 aa17.44■□□□□ 0.38
TROAP-213ENST00000550709 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
TROAP-213ENST00000550709 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
TROAP-213ENST00000550709 CRAMP1Q96RY5 1269 aa17.44■□□□□ 0.38
TROAP-213ENST00000550709 RIC1Q4ADV7 1423 aa17.44■□□□□ 0.38
TROAP-213ENST00000550709 BCAR3O75815 825 aa17.43■□□□□ 0.38
TROAP-213ENST00000550709 HSP90B1P14625 803 aaKnown RBP17.43■□□□□ 0.38
TROAP-213ENST00000550709 SLC51AQ86UW1 340 aa17.43■□□□□ 0.38
TROAP-213ENST00000550709 H7C1W4 665 aa17.42■□□□□ 0.38
TROAP-213ENST00000550709 PDE8AO60658 829 aa17.42■□□□□ 0.38
TROAP-213ENST00000550709 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
TROAP-213ENST00000550709 C7orf43Q8WVR3 580 aa17.42■□□□□ 0.38
TROAP-213ENST00000550709 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
TROAP-213ENST00000550709 ARFGEF2Q9Y6D5 1785 aa17.42■□□□□ 0.38
TROAP-213ENST00000550709 ABCC4O15439 1325 aa17.42■□□□□ 0.38
TROAP-213ENST00000550709 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
TROAP-213ENST00000550709 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
TROAP-213ENST00000550709 FRAT1Q92837 279 aaPredicted RBP17.41■□□□□ 0.38
TROAP-213ENST00000550709 TNRC6CQ9HCJ0 1690 aaKnown RBP17.41■□□□□ 0.38
TROAP-213ENST00000550709 NFKBIEO00221 500 aa17.4■□□□□ 0.38
TROAP-213ENST00000550709 ALDH1L1O75891 902 aa17.4■□□□□ 0.38
TROAP-213ENST00000550709 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
TROAP-213ENST00000550709 SOGA3Q5TF21 947 aa17.4■□□□□ 0.38
TROAP-213ENST00000550709 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
TROAP-213ENST00000550709 COL11A2P13942 1736 aaPredicted RBP17.4■□□□□ 0.38
TROAP-213ENST00000550709 CDHR2Q9BYE9 1310 aa17.4■□□□□ 0.38
TROAP-213ENST00000550709 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
TROAP-213ENST00000550709 CASP7P55210 303 aa17.39■□□□□ 0.37
TROAP-213ENST00000550709 CTSWP56202 376 aa17.39■□□□□ 0.37
TROAP-213ENST00000550709 GRAPQ13588 217 aa17.39■□□□□ 0.37
TROAP-213ENST00000550709 CCDC152Q4G0S7 254 aa17.39■□□□□ 0.37
TROAP-213ENST00000550709 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
TROAP-213ENST00000550709 API5Q9BZZ5 524 aaKnown RBP17.39■□□□□ 0.37
TROAP-213ENST00000550709 SEC31BQ9NQW1 1179 aa17.39■□□□□ 0.37
TROAP-213ENST00000550709 RNF181Q9P0P0 153 aa17.39■□□□□ 0.37
TROAP-213ENST00000550709 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
TROAP-213ENST00000550709 GRM8O00222 908 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms