RNA–Protein interactions for RNA: ENST00000550636.1

LINC02396-202, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 2 BASIC

Gene LINC02396, Length 2,324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-202ENST00000550636 USP42Q9H9J4 1324 aaKnown RBP17.79■□□□□ 0.44
LINC02396-202ENST00000550636 GLRX3O76003 335 aaKnown RBP17.78■□□□□ 0.44
LINC02396-202ENST00000550636 VPS72Q15906 364 aa17.78■□□□□ 0.44
LINC02396-202ENST00000550636 GPATCH3Q96I76 525 aa17.78■□□□□ 0.44
LINC02396-202ENST00000550636 ECHDC1Q9NTX5 307 aa17.78■□□□□ 0.44
LINC02396-202ENST00000550636 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.78■□□□□ 0.44
LINC02396-202ENST00000550636 EAF2Q96CJ1 260 aaPredicted RBP17.78■□□□□ 0.44
LINC02396-202ENST00000550636 ZBTB1Q9Y2K1 713 aa17.78■□□□□ 0.44
LINC02396-202ENST00000550636 HSCBQ8IWL3 235 aa17.77■□□□□ 0.44
LINC02396-202ENST00000550636 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
LINC02396-202ENST00000550636 CCDC8Q9H0W5 538 aaPredicted RBP17.77■□□□□ 0.44
LINC02396-202ENST00000550636 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
LINC02396-202ENST00000550636 WNK3Q9BYP7 1800 aa17.77■□□□□ 0.44
LINC02396-202ENST00000550636 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
LINC02396-202ENST00000550636 NWD2Q9ULI1 1742 aa17.77■□□□□ 0.44
LINC02396-202ENST00000550636 TRIM28Q13263 835 aaKnown RBP17.77■□□□□ 0.43
LINC02396-202ENST00000550636 CNTROBQ8N137 903 aa17.77■□□□□ 0.43
LINC02396-202ENST00000550636 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.43
LINC02396-202ENST00000550636 FNBP4Q8N3X1 1017 aaPredicted RBP17.77■□□□□ 0.43
LINC02396-202ENST00000550636 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.43
LINC02396-202ENST00000550636 GIGYF2Q6Y7W6 1299 aaKnown RBP17.76■□□□□ 0.43
LINC02396-202ENST00000550636 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
LINC02396-202ENST00000550636 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
LINC02396-202ENST00000550636 ATP6V1AP38606 617 aa17.76■□□□□ 0.43
LINC02396-202ENST00000550636 HLFQ16534 295 aa17.76■□□□□ 0.43
LINC02396-202ENST00000550636 SNX21Q969T3 373 aa17.76■□□□□ 0.43
LINC02396-202ENST00000550636 SLKQ9H2G2 1235 aaPredicted RBP17.76■□□□□ 0.43
LINC02396-202ENST00000550636 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
LINC02396-202ENST00000550636 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
LINC02396-202ENST00000550636 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
LINC02396-202ENST00000550636 KCNQ2O43526 872 aa17.75■□□□□ 0.43
LINC02396-202ENST00000550636 IL6STP40189 918 aaPredicted RBP17.75■□□□□ 0.43
LINC02396-202ENST00000550636 USP21Q9UK80 565 aa17.75■□□□□ 0.43
LINC02396-202ENST00000550636 LOC102724428A0A0B4J2F2 783 aa17.74■□□□□ 0.43
LINC02396-202ENST00000550636 SIK1P57059 783 aa17.74■□□□□ 0.43
LINC02396-202ENST00000550636 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
LINC02396-202ENST00000550636 TFCP2Q12800 502 aa17.73■□□□□ 0.43
LINC02396-202ENST00000550636 HSP90AB3PQ58FF7 597 aa17.73■□□□□ 0.43
LINC02396-202ENST00000550636 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
LINC02396-202ENST00000550636 GPTP24298 496 aa17.73■□□□□ 0.43
LINC02396-202ENST00000550636 DZIP3Q86Y13 1208 aaKnown RBP17.73■□□□□ 0.43
LINC02396-202ENST00000550636 FAM89AQ96GI7 184 aa17.73■□□□□ 0.43
LINC02396-202ENST00000550636 TLR7Q9NYK1 1049 aaKnown RBP17.73■□□□□ 0.43
LINC02396-202ENST00000550636 DOT1LQ8TEK3 1739 aa17.73■□□□□ 0.43
LINC02396-202ENST00000550636 PCCAP05165 728 aaPredicted RBP17.72■□□□□ 0.43
LINC02396-202ENST00000550636 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.72■□□□□ 0.43
LINC02396-202ENST00000550636 ZBTB38Q8NAP3 1195 aaPredicted RBP17.72■□□□□ 0.43
LINC02396-202ENST00000550636 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
LINC02396-202ENST00000550636 RABEP1Q15276 862 aa17.71■□□□□ 0.43
LINC02396-202ENST00000550636 INTS5Q6P9B9 1019 aaKnown RBP17.71■□□□□ 0.43
LINC02396-202ENST00000550636 SMARCC1Q92922 1105 aaPredicted RBP17.71■□□□□ 0.43
LINC02396-202ENST00000550636 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
LINC02396-202ENST00000550636 ERVV-1B6SEH8 477 aa17.71■□□□□ 0.43
LINC02396-202ENST00000550636 TNNI3KQ59H18 835 aa17.71■□□□□ 0.43
LINC02396-202ENST00000550636 NLRP10Q86W26 655 aa17.71■□□□□ 0.43
LINC02396-202ENST00000550636 FPGT-TNNI3KV9GXZ4 949 aa17.71■□□□□ 0.43
LINC02396-202ENST00000550636 CRKLP46109 303 aaKnown RBP17.7■□□□□ 0.42
LINC02396-202ENST00000550636 ITPK1Q13572 414 aa17.7■□□□□ 0.42
LINC02396-202ENST00000550636 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
LINC02396-202ENST00000550636 EIF5P55010 431 aaKnown RBP17.7■□□□□ 0.42
LINC02396-202ENST00000550636 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
LINC02396-202ENST00000550636 EVI5LQ96CN4 794 aa17.7■□□□□ 0.42
LINC02396-202ENST00000550636 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
LINC02396-202ENST00000550636 ANTXR1Q9H6X2 564 aa17.7■□□□□ 0.42
LINC02396-202ENST00000550636 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
LINC02396-202ENST00000550636 CD2BP2O95400 341 aaKnown RBP17.69■□□□□ 0.42
LINC02396-202ENST00000550636 CCDC57Q2TAC2 916 aa17.69■□□□□ 0.42
LINC02396-202ENST00000550636 ZNF594Q96JF6 807 aaPredicted RBP17.69■□□□□ 0.42
LINC02396-202ENST00000550636 MCCP23508 829 aa17.69■□□□□ 0.42
LINC02396-202ENST00000550636 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
LINC02396-202ENST00000550636 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
LINC02396-202ENST00000550636 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
LINC02396-202ENST00000550636 IL25Q9H293 177 aa17.69■□□□□ 0.42
LINC02396-202ENST00000550636 HSPA1LP34931 641 aa17.68■□□□□ 0.42
LINC02396-202ENST00000550636 IL15P40933 162 aaPredicted RBP17.68■□□□□ 0.42
LINC02396-202ENST00000550636 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
LINC02396-202ENST00000550636 DBNLQ9UJU6 430 aaKnown RBP17.68■□□□□ 0.42
LINC02396-202ENST00000550636 EYA2O00167 538 aa17.67■□□□□ 0.42
LINC02396-202ENST00000550636 SGSM2O43147 1006 aa17.67■□□□□ 0.42
LINC02396-202ENST00000550636 CCDC85AQ96PX6 553 aaPredicted RBP17.67■□□□□ 0.42
LINC02396-202ENST00000550636 DIAPH3Q9NSV4 1193 aa17.67■□□□□ 0.42
LINC02396-202ENST00000550636 TRMT112Q9UI30 125 aaKnown RBP17.67■□□□□ 0.42
LINC02396-202ENST00000550636 LRRC24Q50LG9 513 aa17.67■□□□□ 0.42
LINC02396-202ENST00000550636 TJP1Q07157 1748 aa17.66■□□□□ 0.42
LINC02396-202ENST00000550636 K7ELQ4 463 aaPredicted RBP17.66■□□□□ 0.42
LINC02396-202ENST00000550636 CSF1RP07333 972 aa17.66■□□□□ 0.42
LINC02396-202ENST00000550636 RUFY2Q8WXA3 655 aa17.66■□□□□ 0.42
LINC02396-202ENST00000550636 DBNDD2Q9BQY9 259 aa17.66■□□□□ 0.42
LINC02396-202ENST00000550636 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
LINC02396-202ENST00000550636 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
LINC02396-202ENST00000550636 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
LINC02396-202ENST00000550636 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
LINC02396-202ENST00000550636 CDHR2Q9BYE9 1310 aa17.65■□□□□ 0.42
LINC02396-202ENST00000550636 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
LINC02396-202ENST00000550636 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
LINC02396-202ENST00000550636 CIAO1O76071 339 aa17.65■□□□□ 0.42
LINC02396-202ENST00000550636 ATP5JP18859 108 aa17.65■□□□□ 0.42
LINC02396-202ENST00000550636 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
LINC02396-202ENST00000550636 HSP90AA1P07900 732 aaKnown RBP17.64■□□□□ 0.41
LINC02396-202ENST00000550636 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms