RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 DNA2P51530 1060 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 FAM107BQ9H098 131 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 CCDC8Q9H0W5 538 aaPredicted RBP14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 TRIM27P14373 513 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 GSTO1P78417 241 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 WASLO00401 505 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 ST5P78524 1137 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 C16orf45Q96MC5 204 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 LRRC27Q9C0I9 530 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 F6X3S4 739 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 CCDC144CPQ8IYA2 1237 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 PPM1FP49593 454 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 RPRD2Q5VT52 1461 aaKnown RBP14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 URI1O94763 535 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 UBE4AQ14139 1066 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 EXOC1Q9NV70 894 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 NOS1P29475 1434 aa14.37□□□□□ -0.11
RAB3IP-212ENST00000550536 CCDC172P0C7W6 258 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 UBE2HP62256 183 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 CTR9Q6PD62 1173 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 DDX46Q7L014 1031 aaKnown RBP14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 IFI16Q16666 785 aaKnown RBP14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 PPM1EQ8WY54 764 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 CCDC40Q4G0X9 1142 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 MICU3Q86XE3 530 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 HLTFQ14527 1009 aaKnown RBP eCLIP14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 CEP63Q96MT8 703 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 MYO1BO43795 1136 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 NME9Q86XW9 330 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 NCOA7Q8NI08 942 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 TBC1D9Q6ZT07 1266 aa14.36□□□□□ -0.11
RAB3IP-212ENST00000550536 TSPY2A6NKD2 308 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 TMC6Q7Z403 805 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 RMND1Q9NWS8 449 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 TNNT1P13805 278 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 MCM5P33992 734 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 ZSCAN16Q9H4T2 348 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 ECHDC1Q9NTX5 307 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 CCDC175P0C221 793 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 DDX12PQ92771 950 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 JADE2Q9NQC1 790 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 ADAMTS2O95450 1211 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 GIMAP7Q8NHV1 300 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 ERMNQ8TAM6 284 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 IARSP41252 1262 aaKnown RBP14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 COMMD10Q9Y6G5 202 aa14.35□□□□□ -0.11
RAB3IP-212ENST00000550536 C6orf229H3BNL8 230 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 UBA7P41226 1012 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 ZGPATQ8N5A5 531 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 IKBKGQ9Y6K9 419 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 SPECC1Q5M775 1068 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 PPP4R3BQ5MIZ7 849 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 PRPF4BQ13523 1007 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 NOP2P46087 812 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 LIG1P18858 919 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 BICD1Q96G01 975 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 PLVAPQ9BX97 442 aa14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 TTC12Q9H892 705 aaPredicted RBP14.34□□□□□ -0.11
RAB3IP-212ENST00000550536 EXOC5O00471 708 aa14.33□□□□□ -0.11
RAB3IP-212ENST00000550536 GPTP24298 496 aa14.33□□□□□ -0.11
RAB3IP-212ENST00000550536 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.11
RAB3IP-212ENST00000550536 GRIPAP1Q4V328 841 aa14.33□□□□□ -0.11
RAB3IP-212ENST00000550536 SREK1Q8WXA9 508 aaKnown RBP14.33□□□□□ -0.11
RAB3IP-212ENST00000550536 KRT23Q9C075 422 aa14.33□□□□□ -0.11
RAB3IP-212ENST00000550536 TBCAO75347 108 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 CCDC174Q6PII3 467 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 ADCY5O95622 1261 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 PUF60Q9UHX1 559 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 TMCO5BA8MYB1 307 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 LDHCP07864 332 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 SNW1Q13573 536 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 NGLY1Q96IV0 654 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 TSNARE1Q96NA8 513 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 CTAGE1Q96RT6 745 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 SYNCQ9H7C4 482 aa14.33□□□□□ -0.12
RAB3IP-212ENST00000550536 SLC26A6Q9BXS9 759 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 SYCP2Q9BX26 1530 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 BIN1O00499 593 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 USP37Q86T82 979 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 CABP5Q9NP86 173 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 TRMT1Q9NXH9 659 aaKnown RBP14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 RFC4P35249 363 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 STAT6P42226 847 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 C20orf194Q5TEA3 1177 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 USP16Q9Y5T5 823 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms