RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 NLRP10Q86W26 655 aa12.95□□□□□ -0.34
RAB5C-207ENST00000550504 CCDC191Q8NCU4 936 aa12.95□□□□□ -0.34
RAB5C-207ENST00000550504 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
RAB5C-207ENST00000550504 QSER1Q2KHR3 1735 aa12.94□□□□□ -0.34
RAB5C-207ENST00000550504 GRM8O00222 908 aa12.94□□□□□ -0.34
RAB5C-207ENST00000550504 RGL2O15211 777 aa12.94□□□□□ -0.34
RAB5C-207ENST00000550504 GNAI3P08754 354 aa12.94□□□□□ -0.34
RAB5C-207ENST00000550504 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-207ENST00000550504 UBTFL1P0CB47 393 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-207ENST00000550504 TRIM28Q13263 835 aaKnown RBP12.94□□□□□ -0.34
RAB5C-207ENST00000550504 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
RAB5C-207ENST00000550504 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
RAB5C-207ENST00000550504 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
RAB5C-207ENST00000550504 PDGFDQ9GZP0 370 aaPredicted RBP12.94□□□□□ -0.34
RAB5C-207ENST00000550504 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
RAB5C-207ENST00000550504 NFIXQ14938 502 aa12.93□□□□□ -0.34
RAB5C-207ENST00000550504 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
RAB5C-207ENST00000550504 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
RAB5C-207ENST00000550504 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
RAB5C-207ENST00000550504 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
RAB5C-207ENST00000550504 GNAI2P04899 355 aa12.92□□□□□ -0.34
RAB5C-207ENST00000550504 R3HDM1Q15032 1099 aaKnown RBP12.92□□□□□ -0.34
RAB5C-207ENST00000550504 PPP1R42Q7Z4L9 355 aa12.92□□□□□ -0.34
RAB5C-207ENST00000550504 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
RAB5C-207ENST00000550504 SUCLG2Q96I99 432 aa12.92□□□□□ -0.34
RAB5C-207ENST00000550504 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
RAB5C-207ENST00000550504 LRRFIP2Q9Y608 721 aaKnown RBP12.92□□□□□ -0.34
RAB5C-207ENST00000550504 UTYO14607 1347 aa12.91□□□□□ -0.34
RAB5C-207ENST00000550504 H7C1W4 665 aa12.91□□□□□ -0.34
RAB5C-207ENST00000550504 PCCAP05165 728 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-207ENST00000550504 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-207ENST00000550504 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
RAB5C-207ENST00000550504 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
RAB5C-207ENST00000550504 NLGN1Q8N2Q7 840 aa12.91□□□□□ -0.34
RAB5C-207ENST00000550504 ZBTB38Q8NAP3 1195 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-207ENST00000550504 NPHP1O15259 732 aa12.9□□□□□ -0.34
RAB5C-207ENST00000550504 NTSR2O95665 410 aa12.9□□□□□ -0.34
RAB5C-207ENST00000550504 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-207ENST00000550504 CASP7P55210 303 aa12.9□□□□□ -0.34
RAB5C-207ENST00000550504 ERICH6BQ5W0A0 696 aa12.9□□□□□ -0.34
RAB5C-207ENST00000550504 CCDC24Q8N4L8 307 aa12.9□□□□□ -0.34
RAB5C-207ENST00000550504 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
RAB5C-207ENST00000550504 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
RAB5C-207ENST00000550504 IBTKQ9P2D0 1353 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-207ENST00000550504 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
RAB5C-207ENST00000550504 COL24A1Q17RW2 1714 aa12.89□□□□□ -0.35
RAB5C-207ENST00000550504 MMP10P09238 476 aa12.89□□□□□ -0.35
RAB5C-207ENST00000550504 TM4SF1P30408 202 aa12.89□□□□□ -0.35
RAB5C-207ENST00000550504 DDR1Q08345 913 aa12.89□□□□□ -0.35
RAB5C-207ENST00000550504 AAMPQ13685 434 aa12.89□□□□□ -0.35
RAB5C-207ENST00000550504 EPHA10Q5JZY3 1008 aa12.89□□□□□ -0.35
RAB5C-207ENST00000550504 BICC1Q9H694 974 aaKnown RBP12.89□□□□□ -0.35
RAB5C-207ENST00000550504 POLRMTO00411 1230 aaKnown RBP12.88□□□□□ -0.35
RAB5C-207ENST00000550504 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
RAB5C-207ENST00000550504 ZBTB7AO95365 584 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 SERPINB2P05120 415 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
RAB5C-207ENST00000550504 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 KAZALD1Q96I82 304 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 NYXQ9GZU5 481 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
RAB5C-207ENST00000550504 ABCC12Q96J65 1359 aa12.87□□□□□ -0.35
RAB5C-207ENST00000550504 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
RAB5C-207ENST00000550504 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
RAB5C-207ENST00000550504 SLC16A10Q8TF71 515 aa12.87□□□□□ -0.35
RAB5C-207ENST00000550504 PPP4R2Q9NY27 417 aa12.87□□□□□ -0.35
RAB5C-207ENST00000550504 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
RAB5C-207ENST00000550504 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
RAB5C-207ENST00000550504 FOXO4P98177 505 aa12.86□□□□□ -0.35
RAB5C-207ENST00000550504 B4GALNT3Q6L9W6 998 aa12.86□□□□□ -0.35
RAB5C-207ENST00000550504 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
RAB5C-207ENST00000550504 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
RAB5C-207ENST00000550504 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
RAB5C-207ENST00000550504 CCDC85AQ96PX6 553 aaPredicted RBP12.86□□□□□ -0.35
RAB5C-207ENST00000550504 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
RAB5C-207ENST00000550504 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
RAB5C-207ENST00000550504 PDE8AO60658 829 aa12.85□□□□□ -0.35
RAB5C-207ENST00000550504 ATP8B2P98198 1209 aa12.85□□□□□ -0.35
RAB5C-207ENST00000550504 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
RAB5C-207ENST00000550504 SIRT2Q8IXJ6 389 aa12.85□□□□□ -0.35
RAB5C-207ENST00000550504 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-207ENST00000550504 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-207ENST00000550504 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
RAB5C-207ENST00000550504 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
RAB5C-207ENST00000550504 IGHDP01880 384 aa12.84□□□□□ -0.35
RAB5C-207ENST00000550504 CTSWP56202 376 aa12.84□□□□□ -0.35
RAB5C-207ENST00000550504 ST5P78524 1137 aa12.84□□□□□ -0.35
RAB5C-207ENST00000550504 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
RAB5C-207ENST00000550504 MTFR1LQ9H019 292 aa12.84□□□□□ -0.35
RAB5C-207ENST00000550504 UTRNP46939 3433 aa12.84□□□□□ -0.35
RAB5C-207ENST00000550504 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
RAB5C-207ENST00000550504 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
RAB5C-207ENST00000550504 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
RAB5C-207ENST00000550504 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
RAB5C-207ENST00000550504 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
RAB5C-207ENST00000550504 RWDD1Q9H446 243 aaPredicted RBP12.83□□□□□ -0.36
RAB5C-207ENST00000550504 LAMB2P55268 1798 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms