RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 SCN7AQ01118 1682 aa17.78■□□□□ 0.44
CACNB3-216ENST00000550391 AFDNP55196 1824 aaKnown RBP17.78■□□□□ 0.44
CACNB3-216ENST00000550391 TOMM70O94826 608 aa17.78■□□□□ 0.44
CACNB3-216ENST00000550391 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
CACNB3-216ENST00000550391 AKT1S1Q96B36 256 aa17.78■□□□□ 0.44
CACNB3-216ENST00000550391 KLRG1Q96E93 195 aa17.78■□□□□ 0.44
CACNB3-216ENST00000550391 ZBTB40Q9NUA8 1239 aa17.78■□□□□ 0.44
CACNB3-216ENST00000550391 ANKRD36CQ5JPF3 1778 aa17.78■□□□□ 0.44
CACNB3-216ENST00000550391 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
CACNB3-216ENST00000550391 CAMTA2O94983 1202 aa17.77■□□□□ 0.44
CACNB3-216ENST00000550391 TCIRG1Q13488 830 aa17.77■□□□□ 0.44
CACNB3-216ENST00000550391 HLFQ16534 295 aa17.77■□□□□ 0.44
CACNB3-216ENST00000550391 CWF19L2Q2TBE0 894 aaKnown RBP17.77■□□□□ 0.44
CACNB3-216ENST00000550391 SMIM5Q71RC9 77 aa17.77■□□□□ 0.44
CACNB3-216ENST00000550391 RGL2O15211 777 aa17.76■□□□□ 0.43
CACNB3-216ENST00000550391 ADRA2BP18089 450 aa17.76■□□□□ 0.43
CACNB3-216ENST00000550391 ARHGEF1Q92888 912 aaKnown RBP17.76■□□□□ 0.43
CACNB3-216ENST00000550391 MEIS3Q99687 375 aa17.76■□□□□ 0.43
CACNB3-216ENST00000550391 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
CACNB3-216ENST00000550391 USP44Q9H0E7 712 aa17.76■□□□□ 0.43
CACNB3-216ENST00000550391 TUBGCP6Q96RT7 1819 aa17.75■□□□□ 0.43
CACNB3-216ENST00000550391 ATP5J2-PTCD1G3V325 749 aa17.75■□□□□ 0.43
CACNB3-216ENST00000550391 SSFA2P28290 1259 aa17.75■□□□□ 0.43
CACNB3-216ENST00000550391 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
CACNB3-216ENST00000550391 TRAPPC3LQ5T215 181 aa17.75■□□□□ 0.43
CACNB3-216ENST00000550391 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
CACNB3-216ENST00000550391 GNAI3P08754 354 aa17.74■□□□□ 0.43
CACNB3-216ENST00000550391 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
CACNB3-216ENST00000550391 GCKRQ14397 625 aa17.74■□□□□ 0.43
CACNB3-216ENST00000550391 UTYO14607 1347 aa17.73■□□□□ 0.43
CACNB3-216ENST00000550391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
CACNB3-216ENST00000550391 PHF14O94880 888 aa17.73■□□□□ 0.43
CACNB3-216ENST00000550391 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
CACNB3-216ENST00000550391 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
CACNB3-216ENST00000550391 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 USPL1Q5W0Q7 1092 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 C9orf78Q9NZ63 289 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-216ENST00000550391 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 WWC3Q9ULE0 1092 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 CD2APQ9Y5K6 639 aa17.72■□□□□ 0.43
CACNB3-216ENST00000550391 USP42Q9H9J4 1324 aaKnown RBP17.72■□□□□ 0.43
CACNB3-216ENST00000550391 PCNTO95613 3336 aa17.71■□□□□ 0.43
CACNB3-216ENST00000550391 GRM8O00222 908 aa17.71■□□□□ 0.43
CACNB3-216ENST00000550391 ZPR1O75312 459 aa17.71■□□□□ 0.43
CACNB3-216ENST00000550391 NBPF7P0C2Y1 421 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-216ENST00000550391 RFC4P35249 363 aa17.71■□□□□ 0.43
CACNB3-216ENST00000550391 CCDC136Q96JN2 1154 aa17.71■□□□□ 0.43
CACNB3-216ENST00000550391 CWC25Q9NXE8 425 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-216ENST00000550391 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
CACNB3-216ENST00000550391 HDAC5Q9UQL6 1122 aa17.71■□□□□ 0.43
CACNB3-216ENST00000550391 PCDHB15Q9Y5E8 787 aa17.71■□□□□ 0.43
CACNB3-216ENST00000550391 GNAI2P04899 355 aa17.7■□□□□ 0.42
CACNB3-216ENST00000550391 UBTFL1P0CB47 393 aaPredicted RBP17.7■□□□□ 0.42
CACNB3-216ENST00000550391 C1orf115Q9H7X2 142 aa17.7■□□□□ 0.42
CACNB3-216ENST00000550391 WDR90Q96KV7 1748 aa17.69■□□□□ 0.42
CACNB3-216ENST00000550391 H7C1W4 665 aa17.69■□□□□ 0.42
CACNB3-216ENST00000550391 GPTP24298 496 aa17.69■□□□□ 0.42
CACNB3-216ENST00000550391 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
CACNB3-216ENST00000550391 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
CACNB3-216ENST00000550391 UBN2Q6ZU65 1347 aa17.69■□□□□ 0.42
CACNB3-216ENST00000550391 CASP7P55210 303 aa17.68■□□□□ 0.42
CACNB3-216ENST00000550391 B4GALNT3Q6L9W6 998 aa17.68■□□□□ 0.42
CACNB3-216ENST00000550391 PARP10Q53GL7 1025 aa17.67■□□□□ 0.42
CACNB3-216ENST00000550391 COL23A1Q86Y22 540 aaPredicted RBP17.67■□□□□ 0.42
CACNB3-216ENST00000550391 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACNB3-216ENST00000550391 LRRFIP2Q9Y608 721 aaKnown RBP17.67■□□□□ 0.42
CACNB3-216ENST00000550391 PCCAP05165 728 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-216ENST00000550391 GYS1P13807 737 aa17.66■□□□□ 0.42
CACNB3-216ENST00000550391 SUSD4Q5VX71 490 aa17.66■□□□□ 0.42
CACNB3-216ENST00000550391 TBC1D9BQ66K14 1250 aa17.66■□□□□ 0.42
CACNB3-216ENST00000550391 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
CACNB3-216ENST00000550391 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-216ENST00000550391 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
CACNB3-216ENST00000550391 UBE3BQ7Z3V4 1068 aa17.65■□□□□ 0.42
CACNB3-216ENST00000550391 RPAP2Q8IXW5 612 aaPredicted RBP17.65■□□□□ 0.42
CACNB3-216ENST00000550391 ANKRD44Q8N8A2 993 aa17.65■□□□□ 0.42
CACNB3-216ENST00000550391 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
CACNB3-216ENST00000550391 KAZALD1Q96I82 304 aa17.65■□□□□ 0.42
CACNB3-216ENST00000550391 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
CACNB3-216ENST00000550391 HDAC1Q13547 482 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-216ENST00000550391 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.41
CACNB3-216ENST00000550391 RBM46Q8TBY0 533 aaKnown RBP17.64■□□□□ 0.41
CACNB3-216ENST00000550391 CDHR2Q9BYE9 1310 aa17.64■□□□□ 0.41
CACNB3-216ENST00000550391 NTSR2O95665 410 aa17.63■□□□□ 0.41
CACNB3-216ENST00000550391 IGHDP01880 384 aa17.63■□□□□ 0.41
CACNB3-216ENST00000550391 PPP1R42Q7Z4L9 355 aa17.63■□□□□ 0.41
CACNB3-216ENST00000550391 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
CACNB3-216ENST00000550391 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
CACNB3-216ENST00000550391 ATP8B2P98198 1209 aa17.62■□□□□ 0.41
CACNB3-216ENST00000550391 FSTL1Q12841 308 aa17.62■□□□□ 0.41
CACNB3-216ENST00000550391 BICDL1Q6ZP65 573 aa17.62■□□□□ 0.41
CACNB3-216ENST00000550391 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
CACNB3-216ENST00000550391 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
CACNB3-216ENST00000550391 MSH5O43196 834 aa17.61■□□□□ 0.41
CACNB3-216ENST00000550391 MTX1Q13505 466 aa17.61■□□□□ 0.41
CACNB3-216ENST00000550391 NFIXQ14938 502 aa17.61■□□□□ 0.41
CACNB3-216ENST00000550391 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms