RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 POTEAQ6S8J7 498 aa18.02■□□□□ 0.48
PDE1B-206ENST00000550285 LRRCC1Q9C099 1032 aa18.02■□□□□ 0.48
PDE1B-206ENST00000550285 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
PDE1B-206ENST00000550285 ERVV-1B6SEH8 477 aa18.02■□□□□ 0.47
PDE1B-206ENST00000550285 CAMTA2O94983 1202 aa18.02■□□□□ 0.47
PDE1B-206ENST00000550285 RXRBP28702 533 aa18.02■□□□□ 0.47
PDE1B-206ENST00000550285 TRIM28Q13263 835 aaKnown RBP18.02■□□□□ 0.47
PDE1B-206ENST00000550285 NLRP10Q86W26 655 aa18.02■□□□□ 0.47
PDE1B-206ENST00000550285 LRRC4BQ9NT99 713 aa18.02■□□□□ 0.47
PDE1B-206ENST00000550285 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
PDE1B-206ENST00000550285 COL15A1P39059 1388 aa18.01■□□□□ 0.47
PDE1B-206ENST00000550285 LMBR1LQ6UX01 489 aa18.01■□□□□ 0.47
PDE1B-206ENST00000550285 ANKRD36CQ5JPF3 1778 aa18.01■□□□□ 0.47
PDE1B-206ENST00000550285 RABL6Q3YEC7 729 aaPredicted RBP18■□□□□ 0.47
PDE1B-206ENST00000550285 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18■□□□□ 0.47
PDE1B-206ENST00000550285 CNTNAP4Q9C0A0 1308 aa18■□□□□ 0.47
PDE1B-206ENST00000550285 TAF1LQ8IZX4 1826 aa18■□□□□ 0.47
PDE1B-206ENST00000550285 SIL1Q9H173 461 aa18■□□□□ 0.47
PDE1B-206ENST00000550285 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
PDE1B-206ENST00000550285 SEC24BO95487 1268 aa17.99■□□□□ 0.47
PDE1B-206ENST00000550285 RFX5P48382 616 aaPredicted RBP17.99■□□□□ 0.47
PDE1B-206ENST00000550285 TSHZ3Q63HK5 1081 aa17.99■□□□□ 0.47
PDE1B-206ENST00000550285 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
PDE1B-206ENST00000550285 RHPN1Q8TCX5 695 aa17.99■□□□□ 0.47
PDE1B-206ENST00000550285 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
PDE1B-206ENST00000550285 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
PDE1B-206ENST00000550285 GNPATO15228 680 aa17.98■□□□□ 0.47
PDE1B-206ENST00000550285 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
PDE1B-206ENST00000550285 RAB11FIP3O75154 756 aa17.98■□□□□ 0.47
PDE1B-206ENST00000550285 PCCAP05165 728 aaPredicted RBP17.98■□□□□ 0.47
PDE1B-206ENST00000550285 GSPT1P15170 499 aaKnown RBP17.98■□□□□ 0.47
PDE1B-206ENST00000550285 OS9Q13438 667 aaPredicted RBP17.98■□□□□ 0.47
PDE1B-206ENST00000550285 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
PDE1B-206ENST00000550285 RC3H1Q5TC82 1133 aaKnown RBP17.97■□□□□ 0.47
PDE1B-206ENST00000550285 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
PDE1B-206ENST00000550285 CCDC85AQ96PX6 553 aaPredicted RBP17.97■□□□□ 0.47
PDE1B-206ENST00000550285 SALL3Q9BXA9 1300 aa17.96■□□□□ 0.47
PDE1B-206ENST00000550285 RPS6KA4O75676 772 aa17.96■□□□□ 0.47
PDE1B-206ENST00000550285 SASH1O94885 1247 aa17.96■□□□□ 0.47
PDE1B-206ENST00000550285 PTPN12Q05209 780 aaKnown RBP17.96■□□□□ 0.47
PDE1B-206ENST00000550285 SUSD4Q5VX71 490 aa17.96■□□□□ 0.47
PDE1B-206ENST00000550285 KIF1BPQ96EK5 621 aa17.96■□□□□ 0.47
PDE1B-206ENST00000550285 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
PDE1B-206ENST00000550285 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
PDE1B-206ENST00000550285 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
PDE1B-206ENST00000550285 PDE1AP54750 535 aa17.95■□□□□ 0.46
PDE1B-206ENST00000550285 BMP2KLQ5H9B9 411 aa17.95■□□□□ 0.46
PDE1B-206ENST00000550285 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
PDE1B-206ENST00000550285 PROM2Q8N271 834 aa17.95■□□□□ 0.46
PDE1B-206ENST00000550285 BCORQ6W2J9 1755 aa17.94■□□□□ 0.46
PDE1B-206ENST00000550285 ZNF594Q96JF6 807 aaPredicted RBP17.94■□□□□ 0.46
PDE1B-206ENST00000550285 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
PDE1B-206ENST00000550285 NIP7Q9Y221 180 aaKnown RBP eCLIP17.94■□□□□ 0.46
PDE1B-206ENST00000550285 PHF14O94880 888 aa17.94■□□□□ 0.46
PDE1B-206ENST00000550285 G3BP1Q13283 466 aaKnown RBP eCLIP17.94■□□□□ 0.46
PDE1B-206ENST00000550285 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
PDE1B-206ENST00000550285 USPL1Q5W0Q7 1092 aa17.94■□□□□ 0.46
PDE1B-206ENST00000550285 COPRSQ9NQ92 184 aa17.94■□□□□ 0.46
PDE1B-206ENST00000550285 ARHGEF1Q92888 912 aaKnown RBP17.93■□□□□ 0.46
PDE1B-206ENST00000550285 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
PDE1B-206ENST00000550285 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
PDE1B-206ENST00000550285 MX1P20591 662 aa17.92■□□□□ 0.46
PDE1B-206ENST00000550285 BICDL1Q6ZP65 573 aa17.92■□□□□ 0.46
PDE1B-206ENST00000550285 CDHR2Q9BYE9 1310 aa17.92■□□□□ 0.46
PDE1B-206ENST00000550285 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
PDE1B-206ENST00000550285 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
PDE1B-206ENST00000550285 AK7Q96M32 723 aa17.91■□□□□ 0.46
PDE1B-206ENST00000550285 OSBPL3Q9H4L5 887 aa17.91■□□□□ 0.46
PDE1B-206ENST00000550285 NARFQ9UHQ1 456 aa17.91■□□□□ 0.46
PDE1B-206ENST00000550285 APBA3O96018 575 aa17.9■□□□□ 0.46
PDE1B-206ENST00000550285 CSF1RP07333 972 aa17.9■□□□□ 0.46
PDE1B-206ENST00000550285 HCLS1P14317 486 aaPredicted RBP17.9■□□□□ 0.46
PDE1B-206ENST00000550285 TXNRD1Q16881 649 aa17.9■□□□□ 0.46
PDE1B-206ENST00000550285 SDSP20132 328 aa17.9■□□□□ 0.46
PDE1B-206ENST00000550285 ERC1Q8IUD2 1116 aa17.9■□□□□ 0.46
PDE1B-206ENST00000550285 TTLL11Q8NHH1 800 aa17.9■□□□□ 0.46
PDE1B-206ENST00000550285 EAF2Q96CJ1 260 aaPredicted RBP17.9■□□□□ 0.46
PDE1B-206ENST00000550285 UTP14AQ9BVJ6 771 aaKnown RBP17.9■□□□□ 0.46
PDE1B-206ENST00000550285 PUS3Q9BZE2 481 aaKnown RBP17.9■□□□□ 0.46
PDE1B-206ENST00000550285 NTSR2O95665 410 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 TFCP2Q12800 502 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 LRRC24Q50LG9 513 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 ATG9AQ7Z3C6 839 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 CLASRPQ8N2M8 674 aaKnown RBP17.89■□□□□ 0.45
PDE1B-206ENST00000550285 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
PDE1B-206ENST00000550285 GREM2Q9H772 168 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 ZNF652Q9Y2D9 606 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
PDE1B-206ENST00000550285 AACSQ86V21 672 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 TLR7Q9NYK1 1049 aaKnown RBP17.88■□□□□ 0.45
PDE1B-206ENST00000550285 ZPR1O75312 459 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 CTSWP56202 376 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 PARP10Q53GL7 1025 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 C4AP0C0L4 1744 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 SH3TC1Q8TE82 1336 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 MYH3P11055 1940 aa17.88■□□□□ 0.45
PDE1B-206ENST00000550285 PDE8AO60658 829 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms