RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 PPP4R2Q9NY27 417 aa10.23□□□□□ -0.77
GPN3-207ENST00000550228 NIP7Q9Y221 180 aaKnown RBP eCLIP10.23□□□□□ -0.77
GPN3-207ENST00000550228 UBN2Q6ZU65 1347 aa10.23□□□□□ -0.77
GPN3-207ENST00000550228 PNPLA7Q6ZV29 1317 aa10.23□□□□□ -0.77
GPN3-207ENST00000550228 NBPF7P0C2Y1 421 aaPredicted RBP10.22□□□□□ -0.77
GPN3-207ENST00000550228 TBC1D9BQ66K14 1250 aa10.22□□□□□ -0.77
GPN3-207ENST00000550228 B4GALNT3Q6L9W6 998 aa10.22□□□□□ -0.77
GPN3-207ENST00000550228 NLRP10Q86W26 655 aa10.22□□□□□ -0.77
GPN3-207ENST00000550228 FLAD1Q8NFF5 587 aa10.22□□□□□ -0.77
GPN3-207ENST00000550228 LRRFIP2Q9Y608 721 aaKnown RBP10.22□□□□□ -0.77
GPN3-207ENST00000550228 COL24A1Q17RW2 1714 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 GNAI2P04899 355 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 GYS1P13807 737 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 AAMPQ13685 434 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 MSL1Q68DK7 614 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 CLEC4GQ6UXB4 293 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 SUCLG2Q96I99 432 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 CCDC136Q96JN2 1154 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 TRMT112Q9UI30 125 aaKnown RBP10.21□□□□□ -0.77
GPN3-207ENST00000550228 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.77
GPN3-207ENST00000550228 UTYO14607 1347 aa10.2□□□□□ -0.78
GPN3-207ENST00000550228 RGL2O15211 777 aa10.2□□□□□ -0.78
GPN3-207ENST00000550228 PCCAP05165 728 aaPredicted RBP10.2□□□□□ -0.78
GPN3-207ENST00000550228 TRIM28Q13263 835 aaKnown RBP10.2□□□□□ -0.78
GPN3-207ENST00000550228 PARP10Q53GL7 1025 aa10.2□□□□□ -0.78
GPN3-207ENST00000550228 SUSD4Q5VX71 490 aa10.2□□□□□ -0.78
GPN3-207ENST00000550228 FAM89AQ96GI7 184 aa10.2□□□□□ -0.78
GPN3-207ENST00000550228 SETDB2Q96T68 719 aa10.2□□□□□ -0.78
GPN3-207ENST00000550228 UTP14AQ9BVJ6 771 aaKnown RBP10.2□□□□□ -0.78
GPN3-207ENST00000550228 IBTKQ9P2D0 1353 aaPredicted RBP10.19□□□□□ -0.78
GPN3-207ENST00000550228 H7C1W4 665 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 NPHP1O15259 732 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 NFIXQ14938 502 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 CEP85Q6P2H3 762 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 PPP1R42Q7Z4L9 355 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 SYNE4Q8N205 404 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 BICC1Q9H694 974 aaKnown RBP10.19□□□□□ -0.78
GPN3-207ENST00000550228 MYH3P11055 1940 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 LAMB2P55268 1798 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 CASZ1Q86V15 1759 aa10.19□□□□□ -0.78
GPN3-207ENST00000550228 DDX60Q8IY21 1712 aaKnown RBP10.19□□□□□ -0.78
GPN3-207ENST00000550228 CARMIL3Q8ND23 1372 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 SH3TC1Q8TE82 1336 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 NTSR2O95665 410 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 GTF2E1P29083 439 aaPredicted RBP10.18□□□□□ -0.78
GPN3-207ENST00000550228 CASP7P55210 303 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 EPHA10Q5JZY3 1008 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 NBPF5PQ86XG9 351 aaPredicted RBP10.18□□□□□ -0.78
GPN3-207ENST00000550228 CCDC24Q8N4L8 307 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 ANKRD44Q8N8A2 993 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 ZBTB38Q8NAP3 1195 aaPredicted RBP10.18□□□□□ -0.78
GPN3-207ENST00000550228 HDAC5Q9UQL6 1122 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 CHMP3Q9Y3E7 222 aa10.18□□□□□ -0.78
GPN3-207ENST00000550228 CDHR2Q9BYE9 1310 aa10.17□□□□□ -0.78
GPN3-207ENST00000550228 IRS4O14654 1257 aaPredicted RBP10.17□□□□□ -0.78
GPN3-207ENST00000550228 HCLS1P14317 486 aaPredicted RBP10.17□□□□□ -0.78
GPN3-207ENST00000550228 DDR1Q08345 913 aa10.17□□□□□ -0.78
GPN3-207ENST00000550228 R3HDM1Q15032 1099 aaKnown RBP10.17□□□□□ -0.78
GPN3-207ENST00000550228 ERFEQ4G0M1 354 aa10.17□□□□□ -0.78
GPN3-207ENST00000550228 KAZALD1Q96I82 304 aa10.17□□□□□ -0.78
GPN3-207ENST00000550228 CCDC85AQ96PX6 553 aaPredicted RBP10.17□□□□□ -0.78
GPN3-207ENST00000550228 PDGFDQ9GZP0 370 aaPredicted RBP10.17□□□□□ -0.78
GPN3-207ENST00000550228 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
GPN3-207ENST00000550228 ABCC12Q96J65 1359 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 PNMA6EA0A0J9YXQ4 647 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 IGHDP01880 384 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 SERPINB2P05120 415 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 ATP8B2P98198 1209 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 LMBR1LQ6UX01 489 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 SIRT2Q8IXJ6 389 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 RPAP2Q8IXW5 612 aaPredicted RBP10.16□□□□□ -0.78
GPN3-207ENST00000550228 NLGN1Q8N2Q7 840 aa10.16□□□□□ -0.78
GPN3-207ENST00000550228 RWDD1Q9H446 243 aaPredicted RBP10.16□□□□□ -0.78
GPN3-207ENST00000550228 TNRC6CQ9HCJ0 1690 aaKnown RBP10.15□□□□□ -0.78
GPN3-207ENST00000550228 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
GPN3-207ENST00000550228 POLRMTO00411 1230 aaKnown RBP10.15□□□□□ -0.78
GPN3-207ENST00000550228 SRGAP3O43295 1099 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 PDE8AO60658 829 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 HMMRO75330 724 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 MMP10P09238 476 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 TM4SF1P30408 202 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 FOXO4P98177 505 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 TPTE2Q6XPS3 522 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 CNBD1Q8NA66 436 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 PARP3Q9Y6F1 533 aa10.15□□□□□ -0.78
GPN3-207ENST00000550228 CTSWP56202 376 aa10.14□□□□□ -0.79
GPN3-207ENST00000550228 ST5P78524 1137 aa10.14□□□□□ -0.79
GPN3-207ENST00000550228 HDAC1Q13547 482 aaPredicted RBP10.14□□□□□ -0.79
GPN3-207ENST00000550228 PRR5LQ6MZQ0 368 aa10.14□□□□□ -0.79
GPN3-207ENST00000550228 PLA2G12BQ9BX93 195 aa10.14□□□□□ -0.79
GPN3-207ENST00000550228 SPEF2Q9C093 1822 aa10.14□□□□□ -0.79
GPN3-207ENST00000550228 NRXN2Q9P2S2 1712 aa10.13□□□□□ -0.79
GPN3-207ENST00000550228 KDM2BQ8NHM5 1336 aa10.13□□□□□ -0.79
GPN3-207ENST00000550228 APBB1O00213 710 aa10.13□□□□□ -0.79
GPN3-207ENST00000550228 ZBTB7AO95365 584 aa10.13□□□□□ -0.79
GPN3-207ENST00000550228 HSP90B1P14625 803 aaKnown RBP10.13□□□□□ -0.79
GPN3-207ENST00000550228 MTX1Q13505 466 aa10.13□□□□□ -0.79
GPN3-207ENST00000550228 POLA2Q14181 598 aa10.13□□□□□ -0.79
GPN3-207ENST00000550228 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms