RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 GTF2E1P29083 439 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-215ENST00000550190 PARP10Q53GL7 1025 aa11.36□□□□□ -0.59
CACNB3-215ENST00000550190 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
CACNB3-215ENST00000550190 INTS3Q68E01 1043 aaKnown RBP11.36□□□□□ -0.59
CACNB3-215ENST00000550190 PPP1R42Q7Z4L9 355 aa11.36□□□□□ -0.59
CACNB3-215ENST00000550190 CCDC191Q8NCU4 936 aa11.36□□□□□ -0.59
CACNB3-215ENST00000550190 C9orf78Q9NZ63 289 aaPredicted RBP11.36□□□□□ -0.59
CACNB3-215ENST00000550190 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
CACNB3-215ENST00000550190 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 ATP10DQ9P241 1426 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 SERPINB2P05120 415 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 NEFLP07196 543 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 MMP10P09238 476 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 TM4SF1P30408 202 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 GCKRQ14397 625 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 MVPQ14764 893 aaKnown RBP11.35□□□□□ -0.59
CACNB3-215ENST00000550190 NBPF5PQ86XG9 351 aaPredicted RBP11.35□□□□□ -0.59
CACNB3-215ENST00000550190 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 UTP14AQ9BVJ6 771 aaKnown RBP11.35□□□□□ -0.59
CACNB3-215ENST00000550190 TRMT112Q9UI30 125 aaKnown RBP11.35□□□□□ -0.59
CACNB3-215ENST00000550190 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
CACNB3-215ENST00000550190 DDR1Q08345 913 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 TRIM28Q13263 835 aaKnown RBP11.34□□□□□ -0.59
CACNB3-215ENST00000550190 TPTE2Q6XPS3 522 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 FAM89AQ96GI7 184 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 MTFR1LQ9H019 292 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
CACNB3-215ENST00000550190 CARMIL3Q8ND23 1372 aa11.33□□□□□ -0.6
CACNB3-215ENST00000550190 GRM8O00222 908 aa11.33□□□□□ -0.6
CACNB3-215ENST00000550190 POLRMTO00411 1230 aaKnown RBP11.33□□□□□ -0.6
CACNB3-215ENST00000550190 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
CACNB3-215ENST00000550190 SYNE4Q8N205 404 aa11.33□□□□□ -0.6
CACNB3-215ENST00000550190 MEIS3Q99687 375 aa11.33□□□□□ -0.6
CACNB3-215ENST00000550190 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
CACNB3-215ENST00000550190 NTSR2O95665 410 aa11.32□□□□□ -0.6
CACNB3-215ENST00000550190 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-215ENST00000550190 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-215ENST00000550190 UBTFL1P0CB47 393 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-215ENST00000550190 POLD1P28340 1107 aa11.32□□□□□ -0.6
CACNB3-215ENST00000550190 ERFEQ4G0M1 354 aa11.32□□□□□ -0.6
CACNB3-215ENST00000550190 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
CACNB3-215ENST00000550190 ZBTB38Q8NAP3 1195 aaPredicted RBP11.32□□□□□ -0.6
CACNB3-215ENST00000550190 EXOC6Q8TAG9 804 aa11.32□□□□□ -0.6
CACNB3-215ENST00000550190 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
CACNB3-215ENST00000550190 SH3TC1Q8TE82 1336 aa11.32□□□□□ -0.6
CACNB3-215ENST00000550190 MYH3P11055 1940 aa11.31□□□□□ -0.6
CACNB3-215ENST00000550190 H7C1W4 665 aa11.31□□□□□ -0.6
CACNB3-215ENST00000550190 IRS4O14654 1257 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-215ENST00000550190 ZBTB7BO15156 539 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-215ENST00000550190 GNAI3P08754 354 aa11.31□□□□□ -0.6
CACNB3-215ENST00000550190 ST5P78524 1137 aa11.31□□□□□ -0.6
CACNB3-215ENST00000550190 PRR5LQ6MZQ0 368 aa11.31□□□□□ -0.6
CACNB3-215ENST00000550190 CHMP4BQ9H444 224 aaKnown RBP11.31□□□□□ -0.6
CACNB3-215ENST00000550190 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
CACNB3-215ENST00000550190 DDX60Q8IY21 1712 aaKnown RBP11.31□□□□□ -0.6
CACNB3-215ENST00000550190 HCLS1P14317 486 aaPredicted RBP11.3□□□□□ -0.6
CACNB3-215ENST00000550190 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
CACNB3-215ENST00000550190 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
CACNB3-215ENST00000550190 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 LAMB2P55268 1798 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 GNAI2P04899 355 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 ERICH6BQ5W0A0 696 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 SUCLG2Q96I99 432 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 CHMP3Q9Y3E7 222 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
CACNB3-215ENST00000550190 UTYO14607 1347 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
CACNB3-215ENST00000550190 IBTKQ9P2D0 1353 aaPredicted RBP11.28□□□□□ -0.6
CACNB3-215ENST00000550190 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
CACNB3-215ENST00000550190 PDE8AO60658 829 aa11.28□□□□□ -0.6
CACNB3-215ENST00000550190 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
CACNB3-215ENST00000550190 CASP7P55210 303 aa11.28□□□□□ -0.6
CACNB3-215ENST00000550190 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
CACNB3-215ENST00000550190 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
CACNB3-215ENST00000550190 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
CACNB3-215ENST00000550190 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
CACNB3-215ENST00000550190 EPHA10Q5JZY3 1008 aa11.27□□□□□ -0.61
CACNB3-215ENST00000550190 SLC10A5Q5PT55 438 aa11.27□□□□□ -0.61
CACNB3-215ENST00000550190 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
CACNB3-215ENST00000550190 ZBTB40Q9NUA8 1239 aa11.27□□□□□ -0.61
CACNB3-215ENST00000550190 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
CACNB3-215ENST00000550190 TAF1P21675 1872 aa11.26□□□□□ -0.61
CACNB3-215ENST00000550190 CACNA1SQ13698 1873 aa11.26□□□□□ -0.61
CACNB3-215ENST00000550190 PTGER2P43116 358 aa11.26□□□□□ -0.61
CACNB3-215ENST00000550190 FOXO4P98177 505 aa11.26□□□□□ -0.61
CACNB3-215ENST00000550190 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
CACNB3-215ENST00000550190 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
CACNB3-215ENST00000550190 PDE6BP35913 854 aa11.25□□□□□ -0.61
CACNB3-215ENST00000550190 CTSWP56202 376 aa11.25□□□□□ -0.61
CACNB3-215ENST00000550190 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
CACNB3-215ENST00000550190 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
CACNB3-215ENST00000550190 BRIP1Q9BX63 1249 aa11.25□□□□□ -0.61
CACNB3-215ENST00000550190 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
CACNB3-215ENST00000550190 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
CACNB3-215ENST00000550190 KIF13BQ9NQT8 1826 aa11.24□□□□□ -0.61
CACNB3-215ENST00000550190 CCDC152Q4G0S7 254 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms