RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 RTL5Q5HYW3 569 aaPredicted RBP15.08■□□□□ 0
CACNB3-213ENST00000550064 LNPKQ9C0E8 428 aa15.08■□□□□ 0
CACNB3-213ENST00000550064 RTCBQ9Y3I0 505 aaKnown RBP15.08■□□□□ 0
CACNB3-213ENST00000550064 BCORQ6W2J9 1755 aa15.08■□□□□ 0
CACNB3-213ENST00000550064 PCCAP05165 728 aaPredicted RBP15.07■□□□□ 0
CACNB3-213ENST00000550064 FOXO4P98177 505 aa15.07■□□□□ 0
CACNB3-213ENST00000550064 AMIGO3Q86WK7 504 aa15.07■□□□□ 0
CACNB3-213ENST00000550064 AK7Q96M32 723 aa15.07■□□□□ 0
CACNB3-213ENST00000550064 EXOC6BQ9Y2D4 811 aa15.07■□□□□ 0
CACNB3-213ENST00000550064 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
CACNB3-213ENST00000550064 APBB1O00213 710 aa15.06■□□□□ 0
CACNB3-213ENST00000550064 RABL6Q3YEC7 729 aaPredicted RBP15.06■□□□□ 0
CACNB3-213ENST00000550064 ZBTB38Q8NAP3 1195 aaPredicted RBP15.06■□□□□ 0
CACNB3-213ENST00000550064 ARHGEF1Q92888 912 aaKnown RBP15.06■□□□□ 0
CACNB3-213ENST00000550064 FAM89AQ96GI7 184 aa15.06■□□□□ 0
CACNB3-213ENST00000550064 NARFQ9UHQ1 456 aa15.06■□□□□ 0
CACNB3-213ENST00000550064 ZNF652Q9Y2D9 606 aa15.06■□□□□ 0
CACNB3-213ENST00000550064 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
CACNB3-213ENST00000550064 RGL2O15211 777 aa15.05■□□□□ -0
CACNB3-213ENST00000550064 SMARCA5O60264 1052 aaPredicted RBP15.05■□□□□ -0
CACNB3-213ENST00000550064 SURF6O75683 361 aaKnown RBP15.05■□□□□ -0
CACNB3-213ENST00000550064 CLEC4GQ6UXB4 293 aa15.05■□□□□ -0
CACNB3-213ENST00000550064 SRP68Q9UHB9 627 aaKnown RBP15.05■□□□□ -0
CACNB3-213ENST00000550064 UBR3Q6ZT12 1888 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 SCN7AQ01118 1682 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 CDHR2Q9BYE9 1310 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
CACNB3-213ENST00000550064 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 SUSD4Q5VX71 490 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 USPL1Q5W0Q7 1092 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 SYNE4Q8N205 404 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
CACNB3-213ENST00000550064 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
CACNB3-213ENST00000550064 TRMT112Q9UI30 125 aaKnown RBP15.04■□□□□ -0
CACNB3-213ENST00000550064 NIP7Q9Y221 180 aaKnown RBP eCLIP15.04■□□□□ -0
CACNB3-213ENST00000550064 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
CACNB3-213ENST00000550064 RAB11FIP3O75154 756 aa15.03■□□□□ -0
CACNB3-213ENST00000550064 ZPR1O75312 459 aa15.03■□□□□ -0
CACNB3-213ENST00000550064 PHF14O94880 888 aa15.03■□□□□ -0
CACNB3-213ENST00000550064 PARP10Q53GL7 1025 aa15.03■□□□□ -0
CACNB3-213ENST00000550064 PLA2G12BQ9BX93 195 aa15.03■□□□□ -0
CACNB3-213ENST00000550064 PA2G4Q9UQ80 394 aaKnown RBP15.03■□□□□ -0
CACNB3-213ENST00000550064 FAM177BA6PVY3 158 aa15.02■□□□□ -0
CACNB3-213ENST00000550064 RFC4P35249 363 aa15.02■□□□□ -0
CACNB3-213ENST00000550064 RFX5P48382 616 aaPredicted RBP15.02■□□□□ -0
CACNB3-213ENST00000550064 HSP90AB4PQ58FF6 505 aa15.02■□□□□ -0
CACNB3-213ENST00000550064 C16orf71Q8IYS4 520 aaPredicted RBP15.02■□□□□ -0
CACNB3-213ENST00000550064 UTP14AQ9BVJ6 771 aaKnown RBP15.02■□□□□ -0
CACNB3-213ENST00000550064 LRRCC1Q9C099 1032 aa15.02■□□□□ -0
CACNB3-213ENST00000550064 C4AP0C0L4 1744 aa15.02□□□□□ -0.01
CACNB3-213ENST00000550064 USP42Q9H9J4 1324 aaKnown RBP15.01□□□□□ -0.01
CACNB3-213ENST00000550064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.01□□□□□ -0.01
CACNB3-213ENST00000550064 IRS4O14654 1257 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-213ENST00000550064 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
CACNB3-213ENST00000550064 BCL11AQ9H165 835 aa15.01□□□□□ -0.01
CACNB3-213ENST00000550064 RGPD3A6NKT7 1758 aaPredicted RBP15.01□□□□□ -0.01
CACNB3-213ENST00000550064 RGPD4Q7Z3J3 1758 aa15.01□□□□□ -0.01
CACNB3-213ENST00000550064 NTSR2O95665 410 aa15□□□□□ -0.01
CACNB3-213ENST00000550064 SSFA2P28290 1259 aa15□□□□□ -0.01
CACNB3-213ENST00000550064 OS9Q13438 667 aaPredicted RBP15□□□□□ -0.01
CACNB3-213ENST00000550064 BICDL1Q6ZP65 573 aa15□□□□□ -0.01
CACNB3-213ENST00000550064 KLHDC4Q8TBB5 520 aa15□□□□□ -0.01
CACNB3-213ENST00000550064 RHPN1Q8TCX5 695 aa15□□□□□ -0.01
CACNB3-213ENST00000550064 COPRSQ9NQ92 184 aa15□□□□□ -0.01
CACNB3-213ENST00000550064 CHMP3Q9Y3E7 222 aa15□□□□□ -0.01
CACNB3-213ENST00000550064 SH3TC1Q8TE82 1336 aa14.99□□□□□ -0.01
CACNB3-213ENST00000550064 CSF1RP07333 972 aa14.99□□□□□ -0.01
CACNB3-213ENST00000550064 PTPN12Q05209 780 aaKnown RBP14.99□□□□□ -0.01
CACNB3-213ENST00000550064 G3BP1Q13283 466 aaKnown RBP eCLIP14.99□□□□□ -0.01
CACNB3-213ENST00000550064 ZNF827Q17R98 1081 aa14.99□□□□□ -0.01
CACNB3-213ENST00000550064 PLEKHM2Q8IWE5 1019 aa14.99□□□□□ -0.01
CACNB3-213ENST00000550064 OTUD7AQ8TE49 926 aaPredicted RBP14.99□□□□□ -0.01
CACNB3-213ENST00000550064 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
CACNB3-213ENST00000550064 KIF1BPQ96EK5 621 aa14.99□□□□□ -0.01
CACNB3-213ENST00000550064 EP400Q96L91 3159 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 MYH3P11055 1940 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 PDE8AO60658 829 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 ERC1Q8IUD2 1116 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 CAMKK2Q96RR4 588 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 SIL1Q9H173 461 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 IL1RAPL2Q9NP60 686 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
CACNB3-213ENST00000550064 SASH1O94885 1247 aa14.97□□□□□ -0.01
CACNB3-213ENST00000550064 HCLS1P14317 486 aaPredicted RBP14.97□□□□□ -0.01
CACNB3-213ENST00000550064 CTSWP56202 376 aa14.97□□□□□ -0.01
CACNB3-213ENST00000550064 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
CACNB3-213ENST00000550064 EZH2Q15910 746 aaKnown RBP14.97□□□□□ -0.01
CACNB3-213ENST00000550064 TTLL11Q8NHH1 800 aa14.97□□□□□ -0.01
CACNB3-213ENST00000550064 CCDC85AQ96PX6 553 aaPredicted RBP14.97□□□□□ -0.01
CACNB3-213ENST00000550064 SETDB2Q96T68 719 aa14.97□□□□□ -0.01
CACNB3-213ENST00000550064 TFCP2L1Q9NZI6 479 aa14.97□□□□□ -0.01
CACNB3-213ENST00000550064 COL24A1Q17RW2 1714 aa14.96□□□□□ -0.01
CACNB3-213ENST00000550064 FAM161AQ3B820 660 aa14.96□□□□□ -0.01
CACNB3-213ENST00000550064 ERFEQ4G0M1 354 aa14.96□□□□□ -0.01
CACNB3-213ENST00000550064 NUTM1Q86Y26 1132 aa14.96□□□□□ -0.01
CACNB3-213ENST00000550064 DDX60Q8IY21 1712 aaKnown RBP14.96□□□□□ -0.01
CACNB3-213ENST00000550064 ZNF594Q96JF6 807 aaPredicted RBP14.96□□□□□ -0.01
CACNB3-213ENST00000550064 LAMB2P55268 1798 aa14.96□□□□□ -0.02
CACNB3-213ENST00000550064 SALL3Q9BXA9 1300 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms