RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 ANKMY2Q8IV38 441 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 RHBDD1Q8TEB9 315 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 MADDQ8WXG6 1647 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 AGLP35573 1532 aa9.66□□□□□ -0.86
UBE2N-204ENST00000549833 NCOA1Q15788 1441 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 ANKRD30AQ9BXX3 1397 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 KIF15Q9NS87 1388 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 CLTCQ00610 1675 aaKnown RBP9.65□□□□□ -0.86
UBE2N-204ENST00000549833 RNF17Q9BXT8 1623 aaKnown RBP9.65□□□□□ -0.86
UBE2N-204ENST00000549833 RHOQP17081 205 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 PTSQ03393 145 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 DPYDQ12882 1025 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 MTFR1Q15390 333 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 RRP7BPQ9NSQ0 103 aa9.65□□□□□ -0.86
UBE2N-204ENST00000549833 DHX29Q7Z478 1369 aaKnown RBP9.64□□□□□ -0.87
UBE2N-204ENST00000549833 WDR44Q5JSH3 913 aa9.64□□□□□ -0.87
UBE2N-204ENST00000549833 NBPF10Q6P3W6 841 aaKnown RBP9.64□□□□□ -0.87
UBE2N-204ENST00000549833 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
UBE2N-204ENST00000549833 NOVA2Q9UNW9 492 aaKnown RBP9.64□□□□□ -0.87
UBE2N-204ENST00000549833 DEPDC5O75140 1603 aa9.64□□□□□ -0.87
UBE2N-204ENST00000549833 SFI1A8K8P3 1242 aa9.63□□□□□ -0.87
UBE2N-204ENST00000549833 DKK1O94907 266 aa9.63□□□□□ -0.87
UBE2N-204ENST00000549833 POU4F2Q12837 409 aa9.63□□□□□ -0.87
UBE2N-204ENST00000549833 MLECQ14165 292 aa9.63□□□□□ -0.87
UBE2N-204ENST00000549833 MROH1Q8NDA8 1641 aa9.63□□□□□ -0.87
UBE2N-204ENST00000549833 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
UBE2N-204ENST00000549833 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-204ENST00000549833 ATG7O95352 703 aa9.62□□□□□ -0.87
UBE2N-204ENST00000549833 SRPK2P78362 688 aaKnown RBP9.62□□□□□ -0.87
UBE2N-204ENST00000549833 ELOAQ14241 798 aaKnown RBP9.62□□□□□ -0.87
UBE2N-204ENST00000549833 NPAS3Q8IXF0 933 aa9.62□□□□□ -0.87
UBE2N-204ENST00000549833 FAM200AQ8TCP9 573 aa9.62□□□□□ -0.87
UBE2N-204ENST00000549833 SCHIP1Q9P0W5 487 aaPredicted RBP9.62□□□□□ -0.87
UBE2N-204ENST00000549833 SETD1BQ9UPS6 1966 aaKnown RBP9.62□□□□□ -0.87
UBE2N-204ENST00000549833 SLC35F4A4IF30 521 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 KIF3BO15066 747 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 EPHA4P54764 986 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 C4orf17Q53FE4 359 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 TNS4Q8IZW8 715 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 CCDC155Q8N6L0 562 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 TSEN2Q8NCE0 465 aaKnown RBP9.61□□□□□ -0.87
UBE2N-204ENST00000549833 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
UBE2N-204ENST00000549833 TIMMDC1Q9NPL8 285 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 ERBINQ96RT1 1412 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 C3P01024 1663 aa9.61□□□□□ -0.87
UBE2N-204ENST00000549833 UNC13BO14795 1591 aa9.6□□□□□ -0.87
UBE2N-204ENST00000549833 ANKRD50Q9ULJ7 1429 aa9.6□□□□□ -0.87
UBE2N-204ENST00000549833 PLA2G4AP47712 749 aa9.6□□□□□ -0.87
UBE2N-204ENST00000549833 SLC9A9Q8IVB4 645 aa9.6□□□□□ -0.87
UBE2N-204ENST00000549833 IQSEC3Q9UPP2 1182 aaPredicted RBP9.6□□□□□ -0.87
UBE2N-204ENST00000549833 DYRK1BQ9Y463 629 aa9.6□□□□□ -0.87
UBE2N-204ENST00000549833 ZC3H13Q5T200 1668 aaKnown RBP9.6□□□□□ -0.87
UBE2N-204ENST00000549833 NAIPQ13075 1403 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 SENP3-EIF4A1A0A087X0R7 540 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 TERTO14746 1132 aaKnown RBP9.59□□□□□ -0.87
UBE2N-204ENST00000549833 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 PHKA2P46019 1235 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 FOXK2Q01167 660 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 GGT6Q6P531 493 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 SLC16A10Q8TF71 515 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 CABP1Q9NZU7 370 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 ZMIZ1Q9ULJ6 1067 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 CHMP3Q9Y3E7 222 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 CAMSAP1Q5T5Y3 1602 aa9.59□□□□□ -0.87
UBE2N-204ENST00000549833 HFM1A2PYH4 1435 aa9.58□□□□□ -0.88
UBE2N-204ENST00000549833 PRDM15P57071 1507 aaPredicted RBP9.58□□□□□ -0.88
UBE2N-204ENST00000549833 A0A1B0GTH6 734 aa9.58□□□□□ -0.88
UBE2N-204ENST00000549833 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
UBE2N-204ENST00000549833 HINFPQ9BQA5 517 aa9.58□□□□□ -0.88
UBE2N-204ENST00000549833 USP3Q9Y6I4 520 aa9.58□□□□□ -0.88
UBE2N-204ENST00000549833 H3BM21 787 aa9.57□□□□□ -0.88
UBE2N-204ENST00000549833 PSMA6P60900 246 aaKnown RBP9.57□□□□□ -0.88
UBE2N-204ENST00000549833 NBPF1Q3BBV0 1214 aa9.57□□□□□ -0.88
UBE2N-204ENST00000549833 GAS2L1Q99501 681 aaPredicted RBP9.57□□□□□ -0.88
UBE2N-204ENST00000549833 TSPAN10Q9H1Z9 355 aaPredicted RBP9.57□□□□□ -0.88
UBE2N-204ENST00000549833 ABCC3O15438 1527 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 KDM5DQ9BY66 1539 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 IQGAP3Q86VI3 1631 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 TET3O43151 1660 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 VWDEQ8N2E2 1590 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 ITGA6P23229 1130 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 VEGFBP49765 207 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 SWI5Q1ZZU3 235 aa9.56□□□□□ -0.88
UBE2N-204ENST00000549833 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
UBE2N-204ENST00000549833 TEAD4Q15561 434 aa9.55□□□□□ -0.88
UBE2N-204ENST00000549833 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
UBE2N-204ENST00000549833 ZNF295-AS1Q8N0V1 137 aa9.55□□□□□ -0.88
UBE2N-204ENST00000549833 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
UBE2N-204ENST00000549833 STK32AQ8WU08 396 aa9.55□□□□□ -0.88
UBE2N-204ENST00000549833 E9PCH4 1651 aa9.55□□□□□ -0.88
UBE2N-204ENST00000549833 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
UBE2N-204ENST00000549833 PTPRMP28827 1452 aa9.54□□□□□ -0.88
UBE2N-204ENST00000549833 PPP1R12BO60237 982 aaPredicted RBP9.54□□□□□ -0.88
UBE2N-204ENST00000549833 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
UBE2N-204ENST00000549833 RIPOR1Q6ZS17 1223 aa9.54□□□□□ -0.88
UBE2N-204ENST00000549833 C1orf216Q8TAB5 229 aa9.54□□□□□ -0.88
UBE2N-204ENST00000549833 ZDHHC3Q9NYG2 299 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms