RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 ANP32CO43423 234 aa31.36■■■□□ 2.61
USP44-205ENST00000549639 AIMP1Q12904 312 aaKnown RBP31.36■■■□□ 2.61
USP44-205ENST00000549639 DPY19L2Q6NUT2 758 aa31.36■■■□□ 2.61
USP44-205ENST00000549639 RTKN2Q8IZC4 609 aa31.36■■■□□ 2.61
USP44-205ENST00000549639 DICER1Q9UPY3 1922 aaKnown RBP31.36■■■□□ 2.61
USP44-205ENST00000549639 DUSP27Q5VZP5 1158 aa31.35■■■□□ 2.61
USP44-205ENST00000549639 RPGRQ92834 1020 aaKnown RBP31.35■■■□□ 2.61
USP44-205ENST00000549639 UTP14AQ9BVJ6 771 aaKnown RBP31.35■■■□□ 2.61
USP44-205ENST00000549639 RRAGCQ9HB90 399 aa31.35■■■□□ 2.61
USP44-205ENST00000549639 CHPF2Q9P2E5 772 aa31.35■■■□□ 2.61
USP44-205ENST00000549639 HOXA10P31260 410 aaPredicted RBP31.34■■■□□ 2.61
USP44-205ENST00000549639 CHMP4AQ9BY43 222 aa31.34■■■□□ 2.61
USP44-205ENST00000549639 HYPKQ9NX55 129 aa31.33■■■□□ 2.61
USP44-205ENST00000549639 TCIRG1Q13488 830 aa31.32■■■□□ 2.6
USP44-205ENST00000549639 CCDC184Q52MB2 194 aa31.32■■■□□ 2.6
USP44-205ENST00000549639 SLC10A5Q5PT55 438 aa31.32■■■□□ 2.6
USP44-205ENST00000549639 CC2D2BQ6DHV5 1058 aa31.32■■■□□ 2.6
USP44-205ENST00000549639 VEGFAP15692 232 aaPredicted RBP31.31■■■□□ 2.6
USP44-205ENST00000549639 FKBP4Q02790 459 aaKnown RBP eCLIP31.31■■■□□ 2.6
USP44-205ENST00000549639 RBM17Q96I25 401 aaKnown RBP31.31■■■□□ 2.6
USP44-205ENST00000549639 NLRP3Q96P20 1036 aa31.31■■■□□ 2.6
USP44-205ENST00000549639 FSTL1Q12841 308 aa31.3■■■□□ 2.6
USP44-205ENST00000549639 CCDC27Q2M243 656 aa31.3■■■□□ 2.6
USP44-205ENST00000549639 GRIPAP1Q4V328 841 aa31.3■■■□□ 2.6
USP44-205ENST00000549639 NCBP3Q53F19 620 aaKnown RBP31.3■■■□□ 2.6
USP44-205ENST00000549639 PLBD2Q8NHP8 589 aa31.3■■■□□ 2.6
USP44-205ENST00000549639 CRAMP1Q96RY5 1269 aa31.3■■■□□ 2.6
USP44-205ENST00000549639 ANKRD36CQ5JPF3 1778 aa31.3■■■□□ 2.6
USP44-205ENST00000549639 NLRP10Q86W26 655 aa31.29■■■□□ 2.6
USP44-205ENST00000549639 ANKRD13DQ6ZTN6 518 aa31.28■■■□□ 2.6
USP44-205ENST00000549639 MRS2Q9HD23 443 aa31.28■■■□□ 2.6
USP44-205ENST00000549639 CEP350Q5VT06 3117 aa31.27■■■□□ 2.6
USP44-205ENST00000549639 APLP1P51693 650 aa31.25■■■□□ 2.59
USP44-205ENST00000549639 PSMD1Q99460 953 aa31.25■■■□□ 2.59
USP44-205ENST00000549639 TRMT112Q9UI30 125 aaKnown RBP31.24■■■□□ 2.59
USP44-205ENST00000549639 WDR90Q96KV7 1748 aa31.24■■■□□ 2.59
USP44-205ENST00000549639 SH3TC1Q8TE82 1336 aa31.24■■■□□ 2.59
USP44-205ENST00000549639 SMC1BQ8NDV3 1235 aa31.23■■■□□ 2.59
USP44-205ENST00000549639 OLFM4Q6UX06 510 aa31.22■■■□□ 2.59
USP44-205ENST00000549639 SYNE4Q8N205 404 aa31.21■■■□□ 2.59
USP44-205ENST00000549639 TMX4Q9H1E5 349 aaPredicted RBP31.21■■■□□ 2.59
USP44-205ENST00000549639 ZNF277Q9NRM2 450 aaPredicted RBP31.21■■■□□ 2.59
USP44-205ENST00000549639 SNED1Q8TER0 1413 aa31.21■■■□□ 2.59
USP44-205ENST00000549639 PPEF1O14829 653 aaPredicted RBP31.2■■■□□ 2.59
USP44-205ENST00000549639 C3orf67Q6ZVT6 689 aa31.2■■■□□ 2.59
USP44-205ENST00000549639 WWC1Q8IX03 1113 aa31.2■■■□□ 2.59
USP44-205ENST00000549639 ISCA1Q9BUE6 129 aa31.2■■■□□ 2.59
USP44-205ENST00000549639 ELL2O00472 640 aaPredicted RBP31.19■■■□□ 2.58
USP44-205ENST00000549639 IARSP41252 1262 aaKnown RBP31.19■■■□□ 2.58
USP44-205ENST00000549639 GOLGA2Q08379 1002 aa31.19■■■□□ 2.58
USP44-205ENST00000549639 TRIM28Q13263 835 aaKnown RBP31.19■■■□□ 2.58
USP44-205ENST00000549639 CCDC30Q5VVM6 783 aa31.19■■■□□ 2.58
USP44-205ENST00000549639 C8orf58Q8NAV2 365 aa31.19■■■□□ 2.58
USP44-205ENST00000549639 IL16Q14005 1332 aa31.19■■■□□ 2.58
USP44-205ENST00000549639 POTECB2RU33 542 aa31.17■■■□□ 2.58
USP44-205ENST00000549639 BBOX1O75936 387 aa31.16■■■□□ 2.58
USP44-205ENST00000549639 RIC3Q7Z5B4 369 aa31.16■■■□□ 2.58
USP44-205ENST00000549639 DDNO94850 711 aaPredicted RBP31.15■■■□□ 2.58
USP44-205ENST00000549639 HCLS1P14317 486 aaPredicted RBP31.15■■■□□ 2.58
USP44-205ENST00000549639 JDP2Q8WYK2 163 aa31.15■■■□□ 2.58
USP44-205ENST00000549639 ATP6V0A2Q9Y487 856 aa31.15■■■□□ 2.58
USP44-205ENST00000549639 IQCA1LA6NCM1 817 aa31.14■■■□□ 2.58
USP44-205ENST00000549639 DDX46Q7L014 1031 aaKnown RBP31.14■■■□□ 2.58
USP44-205ENST00000549639 L3MBTL3Q96JM7 780 aaPredicted RBP31.14■■■□□ 2.58
USP44-205ENST00000549639 ABCC4O15439 1325 aa31.14■■■□□ 2.58
USP44-205ENST00000549639 DDX58O95786 925 aaKnown RBP31.13■■■□□ 2.57
USP44-205ENST00000549639 VPS33BQ9H267 617 aa31.13■■■□□ 2.57
USP44-205ENST00000549639 PHAXQ9H814 394 aaKnown RBP31.13■■■□□ 2.57
USP44-205ENST00000549639 ATP5J2-PTCD1G3V325 749 aa31.12■■■□□ 2.57
USP44-205ENST00000549639 FZD9O00144 591 aa31.12■■■□□ 2.57
USP44-205ENST00000549639 HSP90B1P14625 803 aaKnown RBP31.11■■■□□ 2.57
USP44-205ENST00000549639 LAMB2P55268 1798 aa31.11■■■□□ 2.57
USP44-205ENST00000549639 TMC4Q7Z404 712 aa31.11■■■□□ 2.57
USP44-205ENST00000549639 SP8Q8IXZ3 490 aa31.1■■■□□ 2.57
USP44-205ENST00000549639 TSR2Q969E8 191 aaKnown RBP31.1■■■□□ 2.57
USP44-205ENST00000549639 TCERG1O14776 1098 aaKnown RBP31.09■■■□□ 2.57
USP44-205ENST00000549639 GRAPQ13588 217 aa31.09■■■□□ 2.57
USP44-205ENST00000549639 WDR63Q8IWG1 891 aa31.09■■■□□ 2.57
USP44-205ENST00000549639 TSPYL6Q8N831 410 aa31.09■■■□□ 2.57
USP44-205ENST00000549639 SUPT20HQ8NEM7 779 aa31.09■■■□□ 2.57
USP44-205ENST00000549639 GRAPLQ8TC17 118 aaPredicted RBP31.09■■■□□ 2.57
USP44-205ENST00000549639 FAM89AQ96GI7 184 aa31.09■■■□□ 2.57
USP44-205ENST00000549639 STK31Q9BXU1 1019 aa31.09■■■□□ 2.57
USP44-205ENST00000549639 SCN4AP35499 1836 aa31.08■■■□□ 2.57
USP44-205ENST00000549639 SF3B3Q15393 1217 aaKnown RBP31.08■■■□□ 2.57
USP44-205ENST00000549639 ZNF541Q9H0D2 1346 aa31.07■■■□□ 2.56
USP44-205ENST00000549639 TWISTNBQ3B726 338 aaPredicted RBP31.07■■■□□ 2.56
USP44-205ENST00000549639 GPC2Q8N158 579 aa31.07■■■□□ 2.56
USP44-205ENST00000549639 LARGE2Q8N3Y3 721 aa31.07■■■□□ 2.56
USP44-205ENST00000549639 CCDC191Q8NCU4 936 aa31.07■■■□□ 2.56
USP44-205ENST00000549639 EIF6P56537 245 aaKnown RBP31.06■■■□□ 2.56
USP44-205ENST00000549639 ZBTB38Q8NAP3 1195 aaPredicted RBP31.06■■■□□ 2.56
USP44-205ENST00000549639 RTFDC1Q9BY42 306 aaPredicted RBP31.06■■■□□ 2.56
USP44-205ENST00000549639 DDX60Q8IY21 1712 aaKnown RBP31.05■■■□□ 2.56
USP44-205ENST00000549639 MYD88Q99836 296 aa31.05■■■□□ 2.56
USP44-205ENST00000549639 IRS4O14654 1257 aaPredicted RBP31.04■■■□□ 2.56
USP44-205ENST00000549639 METTL22Q9BUU2 404 aaPredicted RBP31.04■■■□□ 2.56
USP44-205ENST00000549639 CHADLQ6NUI6 762 aa31.03■■■□□ 2.56
USP44-205ENST00000549639 DPP8Q6V1X1 898 aaPredicted RBP31.03■■■□□ 2.56
USP44-205ENST00000549639 MPNDQ8N594 471 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms