RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 SUSD4Q5VX71 490 aa11.78□□□□□ -0.52
PKP2-206ENST00000549461 KAZALD1Q96I82 304 aa11.78□□□□□ -0.52
PKP2-206ENST00000549461 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
PKP2-206ENST00000549461 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
PKP2-206ENST00000549461 LRRFIP2Q9Y608 721 aaKnown RBP11.78□□□□□ -0.52
PKP2-206ENST00000549461 TRIM28Q13263 835 aaKnown RBP11.77□□□□□ -0.53
PKP2-206ENST00000549461 EPHA10Q5JZY3 1008 aa11.77□□□□□ -0.53
PKP2-206ENST00000549461 UBE3BQ7Z3V4 1068 aa11.77□□□□□ -0.53
PKP2-206ENST00000549461 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
PKP2-206ENST00000549461 CCDC191Q8NCU4 936 aa11.77□□□□□ -0.53
PKP2-206ENST00000549461 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
PKP2-206ENST00000549461 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.53
PKP2-206ENST00000549461 NIP7Q9Y221 180 aaKnown RBP eCLIP11.77□□□□□ -0.53
PKP2-206ENST00000549461 UTYO14607 1347 aa11.77□□□□□ -0.53
PKP2-206ENST00000549461 H7C1W4 665 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 IGHDP01880 384 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 UBTFL1P0CB47 393 aaPredicted RBP11.76□□□□□ -0.53
PKP2-206ENST00000549461 HSP90AB3PQ58FF7 597 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
PKP2-206ENST00000549461 COL24A1Q17RW2 1714 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 QSER1Q2KHR3 1735 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 NTSR2O95665 410 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 GNAI2P04899 355 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 GNAI3P08754 354 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 NFIXQ14938 502 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 CCDC24Q8N4L8 307 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 ZNF652Q9Y2D9 606 aa11.75□□□□□ -0.53
PKP2-206ENST00000549461 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
PKP2-206ENST00000549461 DDR1Q08345 913 aa11.74□□□□□ -0.53
PKP2-206ENST00000549461 CEP85Q6P2H3 762 aa11.74□□□□□ -0.53
PKP2-206ENST00000549461 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
PKP2-206ENST00000549461 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
PKP2-206ENST00000549461 ZBTB38Q8NAP3 1195 aaPredicted RBP11.74□□□□□ -0.53
PKP2-206ENST00000549461 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
PKP2-206ENST00000549461 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
PKP2-206ENST00000549461 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
PKP2-206ENST00000549461 PCCAP05165 728 aaPredicted RBP11.73□□□□□ -0.53
PKP2-206ENST00000549461 TM4SF1P30408 202 aa11.73□□□□□ -0.53
PKP2-206ENST00000549461 FOXO4P98177 505 aa11.73□□□□□ -0.53
PKP2-206ENST00000549461 ABCC12Q96J65 1359 aa11.73□□□□□ -0.53
PKP2-206ENST00000549461 RGL2O15211 777 aa11.72□□□□□ -0.53
PKP2-206ENST00000549461 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
PKP2-206ENST00000549461 HMGB2P26583 209 aaKnown RBP11.72□□□□□ -0.53
PKP2-206ENST00000549461 ERFEQ4G0M1 354 aa11.72□□□□□ -0.53
PKP2-206ENST00000549461 PARP10Q53GL7 1025 aa11.72□□□□□ -0.53
PKP2-206ENST00000549461 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
PKP2-206ENST00000549461 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
PKP2-206ENST00000549461 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
PKP2-206ENST00000549461 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
PKP2-206ENST00000549461 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
PKP2-206ENST00000549461 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.53
PKP2-206ENST00000549461 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.53
PKP2-206ENST00000549461 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
PKP2-206ENST00000549461 ATP8B2P98198 1209 aa11.71□□□□□ -0.53
PKP2-206ENST00000549461 AAMPQ13685 434 aa11.71□□□□□ -0.53
PKP2-206ENST00000549461 R3HDM1Q15032 1099 aaKnown RBP11.71□□□□□ -0.53
PKP2-206ENST00000549461 PPP1R42Q7Z4L9 355 aa11.71□□□□□ -0.53
PKP2-206ENST00000549461 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
PKP2-206ENST00000549461 CCDC85AQ96PX6 553 aaPredicted RBP11.71□□□□□ -0.53
PKP2-206ENST00000549461 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.53
PKP2-206ENST00000549461 CARMIL3Q8ND23 1372 aa11.7□□□□□ -0.54
PKP2-206ENST00000549461 CASZ1Q86V15 1759 aa11.7□□□□□ -0.54
PKP2-206ENST00000549461 KDM2BQ8NHM5 1336 aa11.7□□□□□ -0.54
PKP2-206ENST00000549461 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
PKP2-206ENST00000549461 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
PKP2-206ENST00000549461 LMBR1LQ6UX01 489 aa11.7□□□□□ -0.54
PKP2-206ENST00000549461 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
PKP2-206ENST00000549461 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
PKP2-206ENST00000549461 COL4A1P02462 1669 aa11.7□□□□□ -0.54
PKP2-206ENST00000549461 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
PKP2-206ENST00000549461 SERPINB2P05120 415 aa11.69□□□□□ -0.54
PKP2-206ENST00000549461 MMP10P09238 476 aa11.69□□□□□ -0.54
PKP2-206ENST00000549461 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
PKP2-206ENST00000549461 POLA2Q14181 598 aa11.69□□□□□ -0.54
PKP2-206ENST00000549461 RABL6Q3YEC7 729 aaPredicted RBP11.69□□□□□ -0.54
PKP2-206ENST00000549461 RPAP2Q8IXW5 612 aaPredicted RBP11.69□□□□□ -0.54
PKP2-206ENST00000549461 KLHDC4Q8TBB5 520 aa11.69□□□□□ -0.54
PKP2-206ENST00000549461 LAMB2P55268 1798 aa11.69□□□□□ -0.54
PKP2-206ENST00000549461 SRGAP3O43295 1099 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 ZBTB7AO95365 584 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 RFX5P48382 616 aaPredicted RBP11.68□□□□□ -0.54
PKP2-206ENST00000549461 CTSWP56202 376 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 MTX1Q13505 466 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
PKP2-206ENST00000549461 RWDD1Q9H446 243 aaPredicted RBP11.68□□□□□ -0.54
PKP2-206ENST00000549461 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
PKP2-206ENST00000549461 NRXN2Q9P2S2 1712 aa11.67□□□□□ -0.54
PKP2-206ENST00000549461 PDE8AO60658 829 aa11.67□□□□□ -0.54
PKP2-206ENST00000549461 CSF1RP07333 972 aa11.67□□□□□ -0.54
PKP2-206ENST00000549461 TPTE2Q6XPS3 522 aa11.67□□□□□ -0.54
PKP2-206ENST00000549461 CNBD1Q8NA66 436 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms