RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 RNF186Q9NXI6 227 aa9.4□□□□□ -0.9
LIN7A-202ENST00000549417 NBPF5PQ86XG9 351 aaPredicted RBP9.39□□□□□ -0.91
LIN7A-202ENST00000549417 AKAP11Q9UKA4 1901 aa9.39□□□□□ -0.91
LIN7A-202ENST00000549417 BRCA2P51587 3418 aa9.38□□□□□ -0.91
LIN7A-202ENST00000549417 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
LIN7A-202ENST00000549417 FAM155AB1AL88 458 aaPredicted RBP9.38□□□□□ -0.91
LIN7A-202ENST00000549417 CAMTA2O94983 1202 aa9.38□□□□□ -0.91
LIN7A-202ENST00000549417 KIF23Q02241 960 aaPredicted RBP9.38□□□□□ -0.91
LIN7A-202ENST00000549417 AKAP4Q5JQC9 854 aa9.38□□□□□ -0.91
LIN7A-202ENST00000549417 LARGE2Q8N3Y3 721 aa9.38□□□□□ -0.91
LIN7A-202ENST00000549417 ADARB2Q9NS39 739 aaKnown RBP9.38□□□□□ -0.91
LIN7A-202ENST00000549417 SAGE1Q9NXZ1 904 aa9.38□□□□□ -0.91
LIN7A-202ENST00000549417 COL6A3P12111 3177 aa9.37□□□□□ -0.91
LIN7A-202ENST00000549417 TCERG1O14776 1098 aaKnown RBP9.37□□□□□ -0.91
LIN7A-202ENST00000549417 STARD3NLO95772 234 aa9.37□□□□□ -0.91
LIN7A-202ENST00000549417 SULT6B1Q6IMI4 303 aa9.37□□□□□ -0.91
LIN7A-202ENST00000549417 GPRC5DQ9NZD1 345 aa9.37□□□□□ -0.91
LIN7A-202ENST00000549417 RNMTO43148 476 aaKnown RBP9.36□□□□□ -0.91
LIN7A-202ENST00000549417 PIP4K2AP48426 406 aaPredicted RBP9.36□□□□□ -0.91
LIN7A-202ENST00000549417 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
LIN7A-202ENST00000549417 USP48Q86UV5 1035 aa9.36□□□□□ -0.91
LIN7A-202ENST00000549417 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
LIN7A-202ENST00000549417 PSMD1Q99460 953 aa9.36□□□□□ -0.91
LIN7A-202ENST00000549417 HTTP42858 3142 aa9.36□□□□□ -0.91
LIN7A-202ENST00000549417 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
LIN7A-202ENST00000549417 A1BGP04217 495 aa9.35□□□□□ -0.91
LIN7A-202ENST00000549417 GMPSP49915 693 aaPredicted RBP9.35□□□□□ -0.91
LIN7A-202ENST00000549417 ZNF157P51786 506 aaPredicted RBP9.35□□□□□ -0.91
LIN7A-202ENST00000549417 HIRAP54198 1017 aaPredicted RBP9.35□□□□□ -0.91
LIN7A-202ENST00000549417 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
LIN7A-202ENST00000549417 NIM1KQ8IY84 436 aa9.35□□□□□ -0.91
LIN7A-202ENST00000549417 TRPM4Q8TD43 1214 aa9.35□□□□□ -0.91
LIN7A-202ENST00000549417 CSRNP1Q96S65 589 aa9.35□□□□□ -0.91
LIN7A-202ENST00000549417 HDAC9Q9UKV0 1011 aa9.35□□□□□ -0.91
LIN7A-202ENST00000549417 UBR2Q8IWV8 1755 aa9.35□□□□□ -0.91
LIN7A-202ENST00000549417 MRC1P22897 1456 aa9.34□□□□□ -0.91
LIN7A-202ENST00000549417 SNED1Q8TER0 1413 aa9.34□□□□□ -0.91
LIN7A-202ENST00000549417 CDC37L1Q7L3B6 337 aa9.34□□□□□ -0.91
LIN7A-202ENST00000549417 DZIP3Q86Y13 1208 aaKnown RBP9.34□□□□□ -0.91
LIN7A-202ENST00000549417 SLC17A8Q8NDX2 589 aa9.34□□□□□ -0.91
LIN7A-202ENST00000549417 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
LIN7A-202ENST00000549417 KLRG2A4D1S0 409 aaPredicted RBP9.33□□□□□ -0.92
LIN7A-202ENST00000549417 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
LIN7A-202ENST00000549417 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
LIN7A-202ENST00000549417 ALDH1B1P30837 517 aa9.33□□□□□ -0.92
LIN7A-202ENST00000549417 IL6STP40189 918 aaPredicted RBP9.33□□□□□ -0.92
LIN7A-202ENST00000549417 AOC3Q16853 763 aa9.33□□□□□ -0.92
LIN7A-202ENST00000549417 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
LIN7A-202ENST00000549417 ZNF496Q96IT1 587 aaPredicted RBP9.33□□□□□ -0.92
LIN7A-202ENST00000549417 PGAP2Q9UHJ9 254 aa9.33□□□□□ -0.92
LIN7A-202ENST00000549417 POTEFA5A3E0 1075 aa9.32□□□□□ -0.92
LIN7A-202ENST00000549417 TBC1D8O95759 1140 aa9.32□□□□□ -0.92
LIN7A-202ENST00000549417 CXCL9Q07325 125 aa9.32□□□□□ -0.92
LIN7A-202ENST00000549417 PKN2Q16513 984 aaKnown RBP9.32□□□□□ -0.92
LIN7A-202ENST00000549417 ZNF296Q8WUU4 475 aaPredicted RBP9.32□□□□□ -0.92
LIN7A-202ENST00000549417 CCDC102AQ96A19 550 aa9.32□□□□□ -0.92
LIN7A-202ENST00000549417 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
LIN7A-202ENST00000549417 GBA2Q9HCG7 927 aaPredicted RBP9.32□□□□□ -0.92
LIN7A-202ENST00000549417 NIP7Q9Y221 180 aaKnown RBP eCLIP9.32□□□□□ -0.92
LIN7A-202ENST00000549417 NPC1L1Q9UHC9 1359 aa9.32□□□□□ -0.92
LIN7A-202ENST00000549417 POLR2AP24928 1970 aaKnown RBP9.32□□□□□ -0.92
LIN7A-202ENST00000549417 ADM5C9JUS6 153 aa9.31□□□□□ -0.92
LIN7A-202ENST00000549417 RAD17O75943 681 aa9.31□□□□□ -0.92
LIN7A-202ENST00000549417 GTF2E1P29083 439 aaPredicted RBP9.31□□□□□ -0.92
LIN7A-202ENST00000549417 TPTE2Q6XPS3 522 aa9.31□□□□□ -0.92
LIN7A-202ENST00000549417 C2orf69Q8N8R5 385 aa9.31□□□□□ -0.92
LIN7A-202ENST00000549417 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
LIN7A-202ENST00000549417 SLC10A3P09131 477 aa9.3□□□□□ -0.92
LIN7A-202ENST00000549417 FBXO46Q6PJ61 603 aaPredicted RBP9.3□□□□□ -0.92
LIN7A-202ENST00000549417 KRT26Q7Z3Y9 468 aa9.3□□□□□ -0.92
LIN7A-202ENST00000549417 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
LIN7A-202ENST00000549417 ZC3H15Q8WU90 426 aaKnown RBP9.3□□□□□ -0.92
LIN7A-202ENST00000549417 ABCC12Q96J65 1359 aa9.29□□□□□ -0.92
LIN7A-202ENST00000549417 HMOX1P09601 288 aa9.29□□□□□ -0.92
LIN7A-202ENST00000549417 SAMD7Q7Z3H4 446 aa9.29□□□□□ -0.92
LIN7A-202ENST00000549417 RPGRQ92834 1020 aaKnown RBP9.29□□□□□ -0.92
LIN7A-202ENST00000549417 POLR3GLQ9BT43 218 aa9.29□□□□□ -0.92
LIN7A-202ENST00000549417 CNOT7Q9UIV1 285 aaKnown RBP9.29□□□□□ -0.92
LIN7A-202ENST00000549417 ZNRF3Q9ULT6 936 aa9.29□□□□□ -0.92
LIN7A-202ENST00000549417 ZNF652Q9Y2D9 606 aa9.29□□□□□ -0.92
LIN7A-202ENST00000549417 TRIOBPQ9H2D6 2365 aa9.29□□□□□ -0.92
LIN7A-202ENST00000549417 PAPPA2Q9BXP8 1791 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 PPEF1O14829 653 aaPredicted RBP9.28□□□□□ -0.92
LIN7A-202ENST00000549417 KCNQ3O43525 872 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 EGFRP00533 1210 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 MTHFSDQ2M296 383 aaKnown RBP9.28□□□□□ -0.92
LIN7A-202ENST00000549417 TBC1D10BQ4KMP7 808 aaPredicted RBP9.28□□□□□ -0.92
LIN7A-202ENST00000549417 CDCA8Q53HL2 280 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 ZNF790Q6PG37 636 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 CLEC4GQ6UXB4 293 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 MICALL2Q8IY33 904 aa9.28□□□□□ -0.92
LIN7A-202ENST00000549417 TEX13AQ9BXU3 409 aaPredicted RBP9.28□□□□□ -0.92
LIN7A-202ENST00000549417 RANBP2P49792 3224 aaKnown RBP9.27□□□□□ -0.92
LIN7A-202ENST00000549417 PRAMEF22A3QJZ6 481 aa9.27□□□□□ -0.93
LIN7A-202ENST00000549417 H7C1D1 291 aa9.27□□□□□ -0.93
LIN7A-202ENST00000549417 EN2P19622 333 aaPredicted RBP9.27□□□□□ -0.93
LIN7A-202ENST00000549417 IL13P35225 146 aa9.27□□□□□ -0.93
LIN7A-202ENST00000549417 HLFQ16534 295 aa9.27□□□□□ -0.93
LIN7A-202ENST00000549417 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms