RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 METTL22Q9BUU2 404 aaPredicted RBP12.25□□□□□ -0.45
RAB5B-205ENST00000549034 UTP14AQ9BVJ6 771 aaKnown RBP12.25□□□□□ -0.45
RAB5B-205ENST00000549034 SCN7AQ01118 1682 aa12.25□□□□□ -0.45
RAB5B-205ENST00000549034 DPEP1P16444 411 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 PDE6BP35913 854 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 NEXNQ0ZGT2 675 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 UBN2Q6ZU65 1347 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 BRIP1Q9BX63 1249 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 TRMT112Q9UI30 125 aaKnown RBP12.24□□□□□ -0.45
RAB5B-205ENST00000549034 WWC3Q9ULE0 1092 aa12.24□□□□□ -0.45
RAB5B-205ENST00000549034 F6X3S4 739 aa12.23□□□□□ -0.45
RAB5B-205ENST00000549034 H0YIN7 160 aa12.23□□□□□ -0.45
RAB5B-205ENST00000549034 CHRNA5P30532 468 aa12.23□□□□□ -0.45
RAB5B-205ENST00000549034 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
RAB5B-205ENST00000549034 GPR162Q16538 588 aa12.23□□□□□ -0.45
RAB5B-205ENST00000549034 C2CD5Q86YS7 1000 aa12.23□□□□□ -0.45
RAB5B-205ENST00000549034 DNAAF4Q8WXU2 420 aa12.23□□□□□ -0.45
RAB5B-205ENST00000549034 ATP10DQ9P241 1426 aa12.22□□□□□ -0.45
RAB5B-205ENST00000549034 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
RAB5B-205ENST00000549034 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-205ENST00000549034 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
RAB5B-205ENST00000549034 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
RAB5B-205ENST00000549034 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB5B-205ENST00000549034 FAM89AQ96GI7 184 aa12.22□□□□□ -0.45
RAB5B-205ENST00000549034 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
RAB5B-205ENST00000549034 ADCY9O60503 1353 aa12.21□□□□□ -0.45
RAB5B-205ENST00000549034 N4BP2Q86UW6 1770 aaPredicted RBP12.21□□□□□ -0.45
RAB5B-205ENST00000549034 BCAR3O75815 825 aa12.21□□□□□ -0.45
RAB5B-205ENST00000549034 NTSR2O95665 410 aa12.21□□□□□ -0.45
RAB5B-205ENST00000549034 KCNA3P22001 575 aa12.21□□□□□ -0.45
RAB5B-205ENST00000549034 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.45
RAB5B-205ENST00000549034 JARID2Q92833 1246 aaPredicted RBP12.21□□□□□ -0.45
RAB5B-205ENST00000549034 CWC25Q9NXE8 425 aaPredicted RBP12.21□□□□□ -0.45
RAB5B-205ENST00000549034 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
RAB5B-205ENST00000549034 ARFGEF2Q9Y6D5 1785 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 IGKV5-2P06315 115 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 CWF19L2Q2TBE0 894 aaKnown RBP12.2□□□□□ -0.46
RAB5B-205ENST00000549034 SLC10A5Q5PT55 438 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
RAB5B-205ENST00000549034 PTPRCP08575 1304 aa12.19□□□□□ -0.46
RAB5B-205ENST00000549034 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
RAB5B-205ENST00000549034 KIF13BQ9NQT8 1826 aa12.19□□□□□ -0.46
RAB5B-205ENST00000549034 NEURL1BA8MQ27 555 aa12.19□□□□□ -0.46
RAB5B-205ENST00000549034 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
RAB5B-205ENST00000549034 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
RAB5B-205ENST00000549034 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
RAB5B-205ENST00000549034 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
RAB5B-205ENST00000549034 BCS1LQ9Y276 419 aa12.19□□□□□ -0.46
RAB5B-205ENST00000549034 IRS4O14654 1257 aaPredicted RBP12.18□□□□□ -0.46
RAB5B-205ENST00000549034 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
RAB5B-205ENST00000549034 SRGNP10124 158 aa12.18□□□□□ -0.46
RAB5B-205ENST00000549034 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
RAB5B-205ENST00000549034 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
RAB5B-205ENST00000549034 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
RAB5B-205ENST00000549034 MASTLQ96GX5 879 aa12.18□□□□□ -0.46
RAB5B-205ENST00000549034 RNF123Q5XPI4 1314 aa12.17□□□□□ -0.46
RAB5B-205ENST00000549034 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
RAB5B-205ENST00000549034 PXDNLA1KZ92 1463 aa12.17□□□□□ -0.46
RAB5B-205ENST00000549034 PCCAP05165 728 aaPredicted RBP12.17□□□□□ -0.46
RAB5B-205ENST00000549034 GCKRQ14397 625 aa12.17□□□□□ -0.46
RAB5B-205ENST00000549034 TTLL6Q8N841 843 aa12.17□□□□□ -0.46
RAB5B-205ENST00000549034 RPGRQ92834 1020 aaKnown RBP12.17□□□□□ -0.46
RAB5B-205ENST00000549034 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
RAB5B-205ENST00000549034 API5Q9BZZ5 524 aaKnown RBP12.17□□□□□ -0.46
RAB5B-205ENST00000549034 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
RAB5B-205ENST00000549034 IBTKQ9P2D0 1353 aaPredicted RBP12.17□□□□□ -0.46
RAB5B-205ENST00000549034 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
RAB5B-205ENST00000549034 H7C1W4 665 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 GRIN3BO60391 1043 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
RAB5B-205ENST00000549034 NPR1P16066 1061 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 YBX3P16989 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
RAB5B-205ENST00000549034 ALDH1B1P30837 517 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 STYK1Q6J9G0 422 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 RBM17Q96I25 401 aaKnown RBP12.16□□□□□ -0.46
RAB5B-205ENST00000549034 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
RAB5B-205ENST00000549034 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
RAB5B-205ENST00000549034 PDE8AO60658 829 aa12.15□□□□□ -0.46
RAB5B-205ENST00000549034 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
RAB5B-205ENST00000549034 ARHGAP27Q6ZUM4 889 aa12.15□□□□□ -0.46
RAB5B-205ENST00000549034 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
RAB5B-205ENST00000549034 CRY2Q49AN0 593 aa12.14□□□□□ -0.47
RAB5B-205ENST00000549034 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
RAB5B-205ENST00000549034 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
RAB5B-205ENST00000549034 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
RAB5B-205ENST00000549034 C21orf2O43822 256 aa12.13□□□□□ -0.47
RAB5B-205ENST00000549034 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
RAB5B-205ENST00000549034 ATF7IPQ6VMQ6 1270 aa12.13□□□□□ -0.47
RAB5B-205ENST00000549034 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
RAB5B-205ENST00000549034 CLUAP1Q96AJ1 413 aa12.13□□□□□ -0.47
RAB5B-205ENST00000549034 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms