RNA–Protein interactions for RNA: ENST00000548980.1

NCKAP1L-206, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-206ENST00000548980 CC2D2BQ6DHV5 1058 aa13.1□□□□□ -0.31
NCKAP1L-206ENST00000548980 KNSTRNQ9Y448 316 aa13.1□□□□□ -0.31
NCKAP1L-206ENST00000548980 USP16Q9Y5T5 823 aa13.1□□□□□ -0.31
NCKAP1L-206ENST00000548980 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 RGL2O15211 777 aa13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 PRPF38BQ5VTL8 546 aaKnown RBP13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 GLIS2Q9BZE0 524 aaPredicted RBP13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 ADARB2Q9NS39 739 aaKnown RBP13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 GPRC5DQ9NZD1 345 aa13.09□□□□□ -0.31
NCKAP1L-206ENST00000548980 RIC1Q4ADV7 1423 aa13.08□□□□□ -0.32
NCKAP1L-206ENST00000548980 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
NCKAP1L-206ENST00000548980 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
NCKAP1L-206ENST00000548980 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
NCKAP1L-206ENST00000548980 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
NCKAP1L-206ENST00000548980 NIM1KQ8IY84 436 aa13.08□□□□□ -0.32
NCKAP1L-206ENST00000548980 ZIC5Q96T25 663 aa13.08□□□□□ -0.32
NCKAP1L-206ENST00000548980 NOGQ13253 232 aa13.07□□□□□ -0.32
NCKAP1L-206ENST00000548980 ZNF408Q9H9D4 720 aa13.07□□□□□ -0.32
NCKAP1L-206ENST00000548980 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
NCKAP1L-206ENST00000548980 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 HLFQ16534 295 aa13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 NUTM1Q86Y26 1132 aa13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
NCKAP1L-206ENST00000548980 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
NCKAP1L-206ENST00000548980 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
NCKAP1L-206ENST00000548980 HOXA10P31260 410 aaPredicted RBP13.05□□□□□ -0.32
NCKAP1L-206ENST00000548980 PGAP2Q9UHJ9 254 aa13.05□□□□□ -0.32
NCKAP1L-206ENST00000548980 KIF7Q2M1P5 1343 aa13.05□□□□□ -0.32
NCKAP1L-206ENST00000548980 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
NCKAP1L-206ENST00000548980 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
NCKAP1L-206ENST00000548980 AOC3Q16853 763 aa13.04□□□□□ -0.32
NCKAP1L-206ENST00000548980 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
NCKAP1L-206ENST00000548980 SAGE1Q9NXZ1 904 aa13.04□□□□□ -0.32
NCKAP1L-206ENST00000548980 LAMB4A4D0S4 1761 aa13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 HUNKP57058 714 aa13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 EIF4G2P78344 907 aaKnown RBP eCLIP13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 CXCL9Q07325 125 aa13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 TRPM4Q8TD43 1214 aa13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 ZC3H15Q8WU90 426 aaKnown RBP13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 CDHR2Q9BYE9 1310 aa13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 IBTKQ9P2D0 1353 aaPredicted RBP13.03□□□□□ -0.32
NCKAP1L-206ENST00000548980 NUP98P52948 1817 aa13.02□□□□□ -0.32
NCKAP1L-206ENST00000548980 FAM155AB1AL88 458 aaPredicted RBP13.02□□□□□ -0.33
NCKAP1L-206ENST00000548980 HIRAP54198 1017 aaPredicted RBP13.02□□□□□ -0.33
NCKAP1L-206ENST00000548980 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
NCKAP1L-206ENST00000548980 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.33
NCKAP1L-206ENST00000548980 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.33
NCKAP1L-206ENST00000548980 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.33
NCKAP1L-206ENST00000548980 VPS33BQ9H267 617 aa13.01□□□□□ -0.33
NCKAP1L-206ENST00000548980 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
NCKAP1L-206ENST00000548980 RGMBQ6NW40 437 aa13□□□□□ -0.33
NCKAP1L-206ENST00000548980 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
NCKAP1L-206ENST00000548980 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
NCKAP1L-206ENST00000548980 SHTN1A0MZ66 631 aa12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 CTU1Q7Z7A3 348 aaKnown RBP12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 RNF186Q9NXI6 227 aa12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 ATP6V0A2Q9Y487 856 aa12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 AKAP11Q9UKA4 1901 aa12.99□□□□□ -0.33
NCKAP1L-206ENST00000548980 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 TRPA1O75762 1119 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 RAD17O75943 681 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 GPTP24298 496 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
NCKAP1L-206ENST00000548980 NTSR2O95665 410 aa12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 TNIP1Q15025 636 aa12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 MCM10Q7L590 875 aa12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 NGEFQ8N5V2 710 aa12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 CNOT7Q9UIV1 285 aaKnown RBP12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 HPS5Q9UPZ3 1129 aa12.97□□□□□ -0.33
NCKAP1L-206ENST00000548980 ABCC4O15439 1325 aa12.96□□□□□ -0.33
NCKAP1L-206ENST00000548980 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1L-206ENST00000548980 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1L-206ENST00000548980 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
NCKAP1L-206ENST00000548980 TTLL7Q6ZT98 887 aa12.96□□□□□ -0.33
NCKAP1L-206ENST00000548980 RSPH6AQ9H0K4 717 aa12.96□□□□□ -0.33
NCKAP1L-206ENST00000548980 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms