RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 C19orf44Q9H6X5 657 aa16.33■□□□□ 0.21
HDAC7-228ENST00000548938 TPCN1Q9ULQ1 816 aa16.33■□□□□ 0.21
HDAC7-228ENST00000548938 KRT85P78386 507 aa16.33■□□□□ 0.2
HDAC7-228ENST00000548938 LRMPQ12912 555 aa16.33■□□□□ 0.2
HDAC7-228ENST00000548938 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
HDAC7-228ENST00000548938 CKAP2LQ8IYA6 745 aa16.33■□□□□ 0.2
HDAC7-228ENST00000548938 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
HDAC7-228ENST00000548938 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
HDAC7-228ENST00000548938 HOXC9P31274 260 aa16.32■□□□□ 0.2
HDAC7-228ENST00000548938 LARP1BQ659C4 914 aaKnown RBP16.32■□□□□ 0.2
HDAC7-228ENST00000548938 RUFY2Q8WXA3 655 aa16.32■□□□□ 0.2
HDAC7-228ENST00000548938 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
HDAC7-228ENST00000548938 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
HDAC7-228ENST00000548938 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
HDAC7-228ENST00000548938 KDM4FA0A1W2PPD8 638 aa16.32■□□□□ 0.2
HDAC7-228ENST00000548938 GTPBP4Q9BZE4 634 aaKnown RBP16.32■□□□□ 0.2
HDAC7-228ENST00000548938 ANO6Q4KMQ2 910 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 KCNB2Q92953 911 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 CBX8Q9HC52 389 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 NRBP1Q9UHY1 535 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 BEND3Q5T5X7 828 aa16.31■□□□□ 0.2
HDAC7-228ENST00000548938 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-228ENST00000548938 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
HDAC7-228ENST00000548938 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 RBM8AQ9Y5S9 174 aaKnown RBP16.3■□□□□ 0.2
HDAC7-228ENST00000548938 TMEM94Q12767 1356 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 ELP1O95163 1332 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 DNAAF4Q8WXU2 420 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 ECHDC1Q9NTX5 307 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 CHPF2Q9P2E5 772 aa16.3■□□□□ 0.2
HDAC7-228ENST00000548938 ANXA1P04083 346 aa16.29■□□□□ 0.2
HDAC7-228ENST00000548938 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-228ENST00000548938 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
HDAC7-228ENST00000548938 CLASRPQ8N2M8 674 aaKnown RBP16.29■□□□□ 0.2
HDAC7-228ENST00000548938 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
HDAC7-228ENST00000548938 KCNJ4P48050 445 aa16.29■□□□□ 0.2
HDAC7-228ENST00000548938 DRC7Q8IY82 874 aa16.29■□□□□ 0.2
HDAC7-228ENST00000548938 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-228ENST00000548938 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
HDAC7-228ENST00000548938 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
HDAC7-228ENST00000548938 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
HDAC7-228ENST00000548938 PA2G4Q9UQ80 394 aaKnown RBP16.28■□□□□ 0.2
HDAC7-228ENST00000548938 ZNF75DP51815 510 aa16.27■□□□□ 0.2
HDAC7-228ENST00000548938 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
HDAC7-228ENST00000548938 TRIM5Q9C035 493 aa16.27■□□□□ 0.2
HDAC7-228ENST00000548938 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.19
HDAC7-228ENST00000548938 PLA2G4DQ86XP0 818 aa16.27■□□□□ 0.19
HDAC7-228ENST00000548938 SPATA32Q96LK8 384 aa16.27■□□□□ 0.19
HDAC7-228ENST00000548938 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.19
HDAC7-228ENST00000548938 STRCP1A6NGW2 1772 aa16.27■□□□□ 0.19
HDAC7-228ENST00000548938 GOLGA6L4A6NEF3 574 aa16.26■□□□□ 0.19
HDAC7-228ENST00000548938 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
HDAC7-228ENST00000548938 SLC27A2O14975 620 aa16.26■□□□□ 0.19
HDAC7-228ENST00000548938 IGSF3O75054 1194 aa16.26■□□□□ 0.19
HDAC7-228ENST00000548938 ATF3P18847 181 aa16.26■□□□□ 0.19
HDAC7-228ENST00000548938 NMIQ13287 307 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-228ENST00000548938 LARP1Q6PKG0 1096 aaKnown RBP16.26■□□□□ 0.19
HDAC7-228ENST00000548938 LEO1Q8WVC0 666 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-228ENST00000548938 EVI5LQ96CN4 794 aa16.26■□□□□ 0.19
HDAC7-228ENST00000548938 NFAT5O94916 1531 aa16.26■□□□□ 0.19
HDAC7-228ENST00000548938 ADCY9O60503 1353 aa16.26■□□□□ 0.19
HDAC7-228ENST00000548938 SMTNL1A8MU46 457 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 TNNT1P13805 278 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 PDCP20941 246 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 NAA30Q147X3 362 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-228ENST00000548938 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 MAP4K1Q92918 833 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
HDAC7-228ENST00000548938 NPHP3Q7Z494 1330 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 NR1I2O75469 434 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
HDAC7-228ENST00000548938 RBM43Q6ZSC3 357 aaKnown RBP16.25■□□□□ 0.19
HDAC7-228ENST00000548938 AACSQ86V21 672 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 KCNH5Q8NCM2 988 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 TDRD7Q8NHU6 1098 aaKnown RBP16.25■□□□□ 0.19
HDAC7-228ENST00000548938 IP6K1Q92551 441 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 SCAND2PQ9GZW5 306 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-228ENST00000548938 DNAJC25Q9H1X3 360 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 KIF20AO95235 890 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 LMOD2Q6P5Q4 547 aa16.25■□□□□ 0.19
HDAC7-228ENST00000548938 KCNQ3O43525 872 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 FGD1P98174 961 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 STK3Q13188 491 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 MTX1Q13505 466 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 CCDC144BQ3MJ40 725 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 CCDC144CPQ8IYA2 1237 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 CACTINQ8WUQ7 758 aaKnown RBP16.24■□□□□ 0.19
HDAC7-228ENST00000548938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.24■□□□□ 0.19
HDAC7-228ENST00000548938 LMTK3Q96Q04 1460 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 GCP02774 474 aa16.24■□□□□ 0.19
HDAC7-228ENST00000548938 ZNF165P49910 485 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms