RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SASH1O94885 1247 aa16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 KCNF1Q9H3M0 494 aa16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 RGPD2P0DJD1 1756 aa16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 MED1Q15648 1581 aaPredicted RBP16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 KCNB2Q92953 911 aa16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 PYCARDQ9ULZ3 195 aa16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 LIG1P18858 919 aa16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 KLHDC4Q8TBB5 520 aa16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
RAPGEF3-218ENST00000548919 SLC27A2O14975 620 aa16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 KAZALD1Q96I82 304 aa16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 STK3Q13188 491 aa16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 BICC1Q9H694 974 aaKnown RBP16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 TFIP11Q9UBB9 837 aaKnown RBP16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 KIF13AQ9H1H9 1805 aa16.85■□□□□ 0.29
RAPGEF3-218ENST00000548919 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 ZNF710Q8N1W2 664 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 SPTLC3Q9NUV7 552 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 GIGYF1O75420 1035 aaPredicted RBP16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 CCDC192P0DO97 292 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 ERC1Q8IUD2 1116 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 CKAP2LQ8IYA6 745 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 PHF8Q9UPP1 1060 aa16.84■□□□□ 0.29
RAPGEF3-218ENST00000548919 PRIMPOLQ96LW4 560 aa16.83■□□□□ 0.29
RAPGEF3-218ENST00000548919 ALDH1L1O75891 902 aa16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 KRT85P78386 507 aa16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 LUZP1Q86V48 1076 aa16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 EDC3Q96F86 508 aaKnown RBP16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 FSD1Q9BTV5 496 aa16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 SLIT1O75093 1534 aa16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 PXDNQ92626 1479 aa16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 ARHGAP23Q9P227 1491 aa16.83■□□□□ 0.28
RAPGEF3-218ENST00000548919 GRM8O00222 908 aa16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 MTERF4Q7Z6M4 381 aaKnown RBP16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 ZNF589Q86UQ0 364 aaPredicted RBP16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 KIAA1524Q8TCG1 905 aa16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 NUP62CLQ9H1M0 184 aa16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 MRVI1Q9Y6F6 885 aa16.82■□□□□ 0.28
RAPGEF3-218ENST00000548919 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 PLEKHO1Q53GL0 409 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 DACT1Q9NYF0 836 aa16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 TYRO3Q06418 890 aa16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 TOB2Q14106 344 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 PRDM10Q9NQV6 1147 aa16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 NDUFB9Q9Y6M9 179 aa16.81■□□□□ 0.28
RAPGEF3-218ENST00000548919 NPHP4O75161 1426 aaPredicted RBP16.8■□□□□ 0.28
RAPGEF3-218ENST00000548919 CHGBP05060 677 aa16.8■□□□□ 0.28
RAPGEF3-218ENST00000548919 PTGS1P23219 599 aa16.8■□□□□ 0.28
RAPGEF3-218ENST00000548919 PSMA5P28066 241 aa16.8■□□□□ 0.28
RAPGEF3-218ENST00000548919 THEMISQ8N1K5 641 aaPredicted RBP16.8■□□□□ 0.28
RAPGEF3-218ENST00000548919 CHMP4AQ9BY43 222 aa16.8■□□□□ 0.28
RAPGEF3-218ENST00000548919 NFAT5O94916 1531 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 USP54Q70EL1 1684 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 PSME1Q06323 249 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 FAM200AQ8TCP9 573 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 LINS1Q8NG48 757 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 TNMDQ9H2S6 317 aa16.79■□□□□ 0.28
RAPGEF3-218ENST00000548919 JAK2O60674 1132 aa16.78■□□□□ 0.28
RAPGEF3-218ENST00000548919 GTF2F1P35269 517 aaKnown RBP eCLIP16.78■□□□□ 0.28
RAPGEF3-218ENST00000548919 ANO6Q4KMQ2 910 aa16.78■□□□□ 0.28
RAPGEF3-218ENST00000548919 KIF3AQ9Y496 699 aa16.78■□□□□ 0.28
RAPGEF3-218ENST00000548919 LMO7Q8WWI1 1683 aa16.78■□□□□ 0.28
RAPGEF3-218ENST00000548919 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
RAPGEF3-218ENST00000548919 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
RAPGEF3-218ENST00000548919 HIP1O00291 1037 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 IGKV5-2P06315 115 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 DDX11Q96FC9 970 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 CCDC94Q9BW85 323 aaPredicted RBP16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 CHD2O14647 1828 aaKnown RBP16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 MYL6BP14649 208 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 PDCP20941 246 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 EPHA10Q5JZY3 1008 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 RNF20Q5VTR2 975 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 CBX8Q9HC52 389 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 NRBP1Q9UHY1 535 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 ELP1O95163 1332 aa16.77■□□□□ 0.28
RAPGEF3-218ENST00000548919 NR1I2O75469 434 aa16.77■□□□□ 0.27
RAPGEF3-218ENST00000548919 LRMPQ12912 555 aa16.77■□□□□ 0.27
RAPGEF3-218ENST00000548919 LEO1Q8WVC0 666 aaPredicted RBP16.77■□□□□ 0.27
RAPGEF3-218ENST00000548919 BCL2L12Q9HB09 334 aa16.77■□□□□ 0.27
RAPGEF3-218ENST00000548919 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
RAPGEF3-218ENST00000548919 RIOK3O14730 519 aaKnown RBP16.76■□□□□ 0.27
RAPGEF3-218ENST00000548919 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
RAPGEF3-218ENST00000548919 PDIA6Q15084 440 aa16.76■□□□□ 0.27
RAPGEF3-218ENST00000548919 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms