RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 XAGE3Q8WTP9 111 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 NECTIN2Q92692 538 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 UTP14AQ9BVJ6 771 aaKnown RBP14.78□□□□□ -0.04
BEST3-209ENST00000548658 NMRK2Q9NPI5 230 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 MBIPQ9NS73 344 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 RIC1Q4ADV7 1423 aa14.77□□□□□ -0.04
BEST3-209ENST00000548658 UBN2Q6ZU65 1347 aa14.77□□□□□ -0.04
BEST3-209ENST00000548658 ANXA1P04083 346 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 HSPA6P17066 643 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 AIMP1Q12904 312 aaKnown RBP14.77□□□□□ -0.05
BEST3-209ENST00000548658 KRT24Q2M2I5 525 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 GRIPAP1Q4V328 841 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 CC2D2BQ6DHV5 1058 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 C7orf43Q8WVR3 580 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 RPGRQ92834 1020 aaKnown RBP14.77□□□□□ -0.05
BEST3-209ENST00000548658 NLRP3Q96P20 1036 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 HYPKQ9NX55 129 aa14.77□□□□□ -0.05
BEST3-209ENST00000548658 COL11A2P13942 1736 aaPredicted RBP14.77□□□□□ -0.05
BEST3-209ENST00000548658 SLX4Q8IY92 1834 aa14.76□□□□□ -0.05
BEST3-209ENST00000548658 VEGFAP15692 232 aaPredicted RBP14.76□□□□□ -0.05
BEST3-209ENST00000548658 HOXA10P31260 410 aaPredicted RBP14.76□□□□□ -0.05
BEST3-209ENST00000548658 TCIRG1Q13488 830 aa14.76□□□□□ -0.05
BEST3-209ENST00000548658 SLC10A5Q5PT55 438 aa14.76□□□□□ -0.05
BEST3-209ENST00000548658 RBM46Q8TBY0 533 aaKnown RBP14.76□□□□□ -0.05
BEST3-209ENST00000548658 RRAGCQ9HB90 399 aa14.76□□□□□ -0.05
BEST3-209ENST00000548658 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
BEST3-209ENST00000548658 CHPF2Q9P2E5 772 aa14.76□□□□□ -0.05
BEST3-209ENST00000548658 NTSR2O95665 410 aa14.75□□□□□ -0.05
BEST3-209ENST00000548658 PRELPP51888 382 aa14.75□□□□□ -0.05
BEST3-209ENST00000548658 CCDC27Q2M243 656 aa14.75□□□□□ -0.05
BEST3-209ENST00000548658 ANKRD13DQ6ZTN6 518 aa14.75□□□□□ -0.05
BEST3-209ENST00000548658 PLBD2Q8NHP8 589 aa14.75□□□□□ -0.05
BEST3-209ENST00000548658 RBM17Q96I25 401 aaKnown RBP14.75□□□□□ -0.05
BEST3-209ENST00000548658 TMX4Q9H1E5 349 aaPredicted RBP14.75□□□□□ -0.05
BEST3-209ENST00000548658 FER1L6Q2WGJ9 1857 aa14.75□□□□□ -0.05
BEST3-209ENST00000548658 CRAMP1Q96RY5 1269 aa14.74□□□□□ -0.05
BEST3-209ENST00000548658 ARFGEF2Q9Y6D5 1785 aa14.74□□□□□ -0.05
BEST3-209ENST00000548658 ABCC12Q96J65 1359 aa14.73□□□□□ -0.05
BEST3-209ENST00000548658 FKBP4Q02790 459 aaKnown RBP eCLIP14.73□□□□□ -0.05
BEST3-209ENST00000548658 FSTL1Q12841 308 aa14.73□□□□□ -0.05
BEST3-209ENST00000548658 CCDC184Q52MB2 194 aa14.73□□□□□ -0.05
BEST3-209ENST00000548658 NLRP10Q86W26 655 aa14.73□□□□□ -0.05
BEST3-209ENST00000548658 CCDC88AQ3V6T2 1871 aa14.73□□□□□ -0.05
BEST3-209ENST00000548658 SH3TC1Q8TE82 1336 aa14.72□□□□□ -0.05
BEST3-209ENST00000548658 TRMT112Q9UI30 125 aaKnown RBP14.72□□□□□ -0.05
BEST3-209ENST00000548658 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.05
BEST3-209ENST00000548658 APLP1P51693 650 aa14.71□□□□□ -0.05
BEST3-209ENST00000548658 CCDC30Q5VVM6 783 aa14.71□□□□□ -0.05
BEST3-209ENST00000548658 WWC1Q8IX03 1113 aa14.71□□□□□ -0.05
BEST3-209ENST00000548658 PSMD1Q99460 953 aa14.71□□□□□ -0.05
BEST3-209ENST00000548658 CACNA1SQ13698 1873 aa14.71□□□□□ -0.05
BEST3-209ENST00000548658 DICER1Q9UPY3 1922 aaKnown RBP14.7□□□□□ -0.06
BEST3-209ENST00000548658 ELL2O00472 640 aaPredicted RBP14.7□□□□□ -0.06
BEST3-209ENST00000548658 BBOX1O75936 387 aa14.7□□□□□ -0.06
BEST3-209ENST00000548658 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
BEST3-209ENST00000548658 TRIM28Q13263 835 aaKnown RBP14.7□□□□□ -0.06
BEST3-209ENST00000548658 SMC1BQ8NDV3 1235 aa14.7□□□□□ -0.06
BEST3-209ENST00000548658 IL16Q14005 1332 aa14.69□□□□□ -0.06
BEST3-209ENST00000548658 PPEF1O14829 653 aaPredicted RBP14.69□□□□□ -0.06
BEST3-209ENST00000548658 DDX58O95786 925 aaKnown RBP14.69□□□□□ -0.06
BEST3-209ENST00000548658 HSP90B1P14625 803 aaKnown RBP14.69□□□□□ -0.06
BEST3-209ENST00000548658 RIC3Q7Z5B4 369 aa14.69□□□□□ -0.06
BEST3-209ENST00000548658 SYNE4Q8N205 404 aa14.69□□□□□ -0.06
BEST3-209ENST00000548658 C8orf58Q8NAV2 365 aa14.69□□□□□ -0.06
BEST3-209ENST00000548658 JDP2Q8WYK2 163 aa14.69□□□□□ -0.06
BEST3-209ENST00000548658 ISCA1Q9BUE6 129 aa14.69□□□□□ -0.06
BEST3-209ENST00000548658 IQCA1LA6NCM1 817 aa14.68□□□□□ -0.06
BEST3-209ENST00000548658 IARSP41252 1262 aaKnown RBP14.68□□□□□ -0.06
BEST3-209ENST00000548658 DDX46Q7L014 1031 aaKnown RBP14.68□□□□□ -0.06
BEST3-209ENST00000548658 VPS33BQ9H267 617 aa14.68□□□□□ -0.06
BEST3-209ENST00000548658 ZNF277Q9NRM2 450 aaPredicted RBP14.68□□□□□ -0.06
BEST3-209ENST00000548658 TIAM2Q8IVF5 1701 aa14.68□□□□□ -0.06
BEST3-209ENST00000548658 ANKRD36CQ5JPF3 1778 aa14.68□□□□□ -0.06
BEST3-209ENST00000548658 OLFM4Q6UX06 510 aa14.67□□□□□ -0.06
BEST3-209ENST00000548658 TMC4Q7Z404 712 aa14.67□□□□□ -0.06
BEST3-209ENST00000548658 WDR63Q8IWG1 891 aa14.67□□□□□ -0.06
BEST3-209ENST00000548658 STK31Q9BXU1 1019 aa14.67□□□□□ -0.06
BEST3-209ENST00000548658 ATP6V0A2Q9Y487 856 aa14.67□□□□□ -0.06
BEST3-209ENST00000548658 ATP5J2-PTCD1G3V325 749 aa14.66□□□□□ -0.06
BEST3-209ENST00000548658 DDNO94850 711 aaPredicted RBP14.66□□□□□ -0.06
BEST3-209ENST00000548658 HCLS1P14317 486 aaPredicted RBP14.66□□□□□ -0.06
BEST3-209ENST00000548658 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
BEST3-209ENST00000548658 C3orf67Q6ZVT6 689 aa14.66□□□□□ -0.06
BEST3-209ENST00000548658 SP8Q8IXZ3 490 aa14.66□□□□□ -0.06
BEST3-209ENST00000548658 SUPT20HQ8NEM7 779 aa14.66□□□□□ -0.06
BEST3-209ENST00000548658 POTECB2RU33 542 aa14.65□□□□□ -0.06
BEST3-209ENST00000548658 FZD9O00144 591 aa14.65□□□□□ -0.06
BEST3-209ENST00000548658 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
BEST3-209ENST00000548658 L3MBTL3Q96JM7 780 aaPredicted RBP14.65□□□□□ -0.06
BEST3-209ENST00000548658 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
BEST3-209ENST00000548658 WDR90Q96KV7 1748 aa14.65□□□□□ -0.06
BEST3-209ENST00000548658 ABCC4O15439 1325 aa14.65□□□□□ -0.06
BEST3-209ENST00000548658 TCERG1O14776 1098 aaKnown RBP14.64□□□□□ -0.07
BEST3-209ENST00000548658 GRAPQ13588 217 aa14.64□□□□□ -0.07
BEST3-209ENST00000548658 SF3B3Q15393 1217 aaKnown RBP14.64□□□□□ -0.07
BEST3-209ENST00000548658 TWISTNBQ3B726 338 aaPredicted RBP14.64□□□□□ -0.07
BEST3-209ENST00000548658 TSPYL6Q8N831 410 aa14.64□□□□□ -0.07
BEST3-209ENST00000548658 ZBTB38Q8NAP3 1195 aaPredicted RBP14.64□□□□□ -0.07
BEST3-209ENST00000548658 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms