RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 MAP3K11Q16584 847 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 RNF20Q5VTR2 975 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 TTC6Q86TZ1 520 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 AACSQ86V21 672 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 MAP3K2Q9Y2U5 619 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 KIF3AQ9Y496 699 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 UTYO14607 1347 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 NFAT5O94916 1531 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 PHRF1Q9P1Y6 1649 aaKnown RBP11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 SLC27A2O14975 620 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 NECAB1Q8N987 351 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 SCAND2PQ9GZW5 306 aaPredicted RBP11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 NUP62CLQ9H1M0 184 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
SMARCD1-205ENST00000548573 HEG1Q9ULI3 1381 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 ANXA1P04083 346 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 KCNJ4P48050 445 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 NMIQ13287 307 aaPredicted RBP11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 C17orf53Q8N3J3 647 aaPredicted RBP11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 PA2G4Q9UQ80 394 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 JCADQ9P266 1359 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 SASH1O94885 1247 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 RBM43Q6ZSC3 357 aaKnown RBP11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 CDC37L1Q7L3B6 337 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 THEMISQ8N1K5 641 aaPredicted RBP11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 LINS1Q8NG48 757 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 HMG20BQ9P0W2 317 aa11.74□□□□□ -0.53
SMARCD1-205ENST00000548573 NPHP4O75161 1426 aaPredicted RBP11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 NPHP3Q7Z494 1330 aa11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 GRM8O00222 908 aa11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 GIGYF1O75420 1035 aaPredicted RBP11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 RPS6KB1P23443 525 aa11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 TYRO3Q06418 890 aa11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 G3BP1Q13283 466 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 EAF2Q96CJ1 260 aaPredicted RBP11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 DDX19AQ9NUU7 478 aaKnown RBP11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 PYCARDQ9ULZ3 195 aa11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 MRVI1Q9Y6F6 885 aa11.73□□□□□ -0.53
SMARCD1-205ENST00000548573 RNMTO43148 476 aaKnown RBP11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 LIG1P18858 919 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 CEBPAP49715 358 aaPredicted RBP11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 KCNH5Q8NCM2 988 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 KCNA6P17658 529 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 MRC1P22897 1456 aa11.72□□□□□ -0.53
SMARCD1-205ENST00000548573 A0A0D9SFI3 127 aa11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 DDX58O95786 925 aaKnown RBP11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 TOB2Q14106 344 aaPredicted RBP11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 MPRIPQ6WCQ1 1025 aa11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 SPC24Q8NBT2 197 aa11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 FSD1Q9BTV5 496 aa11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 PRDM4Q9UKN5 801 aa11.71□□□□□ -0.53
SMARCD1-205ENST00000548573 LMTK3Q96Q04 1460 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 GOLGA6L4A6NEF3 574 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 KRT32Q14532 448 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 PROSER3Q2NL68 480 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 FERMT3Q86UX7 667 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 LEO1Q8WVC0 666 aaPredicted RBP11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 SPATA32Q96LK8 384 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 CLSTN2Q9H4D0 955 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 DACT1Q9NYF0 836 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 RGPD2P0DJD1 1756 aa11.71□□□□□ -0.54
SMARCD1-205ENST00000548573 DTNBO60941 627 aa11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 CAVIN2O95810 425 aa11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 CAMK4Q16566 473 aa11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 JARID2Q92833 1246 aaPredicted RBP11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 CCDC8Q9H0W5 538 aaPredicted RBP11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 CBX8Q9HC52 389 aa11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
SMARCD1-205ENST00000548573 CTIFO43310 598 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 ANO6Q4KMQ2 910 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 LUZP1Q86V48 1076 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 PLA2G4DQ86XP0 818 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 TDRD7Q8NHU6 1098 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 TSC1Q92574 1164 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms