RNA–Protein interactions for RNA: ENST00000548215.1

LINC02403-201, Transcript of long intergenic non-protein coding RNA 2403, humanhuman

TSL 3 BASIC

Gene LINC02403, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02403-201ENST00000548215 ZNF652Q9Y2D9 606 aa12.85□□□□□ -0.35
LINC02403-201ENST00000548215 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
LINC02403-201ENST00000548215 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
LINC02403-201ENST00000548215 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
LINC02403-201ENST00000548215 GPRC5DQ9NZD1 345 aa12.84□□□□□ -0.35
LINC02403-201ENST00000548215 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
LINC02403-201ENST00000548215 NOGQ13253 232 aa12.83□□□□□ -0.36
LINC02403-201ENST00000548215 NIM1KQ8IY84 436 aa12.83□□□□□ -0.36
LINC02403-201ENST00000548215 HLFQ16534 295 aa12.82□□□□□ -0.36
LINC02403-201ENST00000548215 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
LINC02403-201ENST00000548215 DLK2Q6UY11 383 aa12.82□□□□□ -0.36
LINC02403-201ENST00000548215 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
LINC02403-201ENST00000548215 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
LINC02403-201ENST00000548215 PPIP5K2O43314 1243 aa12.81□□□□□ -0.36
LINC02403-201ENST00000548215 TRPA1O75762 1119 aa12.81□□□□□ -0.36
LINC02403-201ENST00000548215 GMPSP49915 693 aaPredicted RBP12.81□□□□□ -0.36
LINC02403-201ENST00000548215 HUNKP57058 714 aa12.81□□□□□ -0.36
LINC02403-201ENST00000548215 BTBD11A6QL63 1104 aa12.8□□□□□ -0.36
LINC02403-201ENST00000548215 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
LINC02403-201ENST00000548215 CXCL9Q07325 125 aa12.8□□□□□ -0.36
LINC02403-201ENST00000548215 AOC3Q16853 763 aa12.8□□□□□ -0.36
LINC02403-201ENST00000548215 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
LINC02403-201ENST00000548215 RPGRQ92834 1020 aaKnown RBP12.8□□□□□ -0.36
LINC02403-201ENST00000548215 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
LINC02403-201ENST00000548215 ABCC12Q96J65 1359 aa12.8□□□□□ -0.36
LINC02403-201ENST00000548215 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
LINC02403-201ENST00000548215 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
LINC02403-201ENST00000548215 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
LINC02403-201ENST00000548215 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
LINC02403-201ENST00000548215 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
LINC02403-201ENST00000548215 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
LINC02403-201ENST00000548215 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
LINC02403-201ENST00000548215 RNF186Q9NXI6 227 aa12.79□□□□□ -0.36
LINC02403-201ENST00000548215 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
LINC02403-201ENST00000548215 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
LINC02403-201ENST00000548215 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
LINC02403-201ENST00000548215 SHTN1A0MZ66 631 aa12.78□□□□□ -0.36
LINC02403-201ENST00000548215 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
LINC02403-201ENST00000548215 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
LINC02403-201ENST00000548215 RGMBQ6NW40 437 aa12.78□□□□□ -0.36
LINC02403-201ENST00000548215 TRPM4Q8TD43 1214 aa12.78□□□□□ -0.36
LINC02403-201ENST00000548215 BCL2L13Q9BXK5 485 aa12.78□□□□□ -0.36
LINC02403-201ENST00000548215 SAGE1Q9NXZ1 904 aa12.78□□□□□ -0.36
LINC02403-201ENST00000548215 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
LINC02403-201ENST00000548215 RAD17O75943 681 aa12.77□□□□□ -0.37
LINC02403-201ENST00000548215 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
LINC02403-201ENST00000548215 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
LINC02403-201ENST00000548215 CTU1Q7Z7A3 348 aaKnown RBP12.77□□□□□ -0.37
LINC02403-201ENST00000548215 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
LINC02403-201ENST00000548215 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.37
LINC02403-201ENST00000548215 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
LINC02403-201ENST00000548215 NYXQ9GZU5 481 aa12.77□□□□□ -0.37
LINC02403-201ENST00000548215 MKI67P46013 3256 aaKnown RBP12.77□□□□□ -0.37
LINC02403-201ENST00000548215 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
LINC02403-201ENST00000548215 ZNF157P51786 506 aaPredicted RBP12.76□□□□□ -0.37
LINC02403-201ENST00000548215 RBM17Q96I25 401 aaKnown RBP12.76□□□□□ -0.37
LINC02403-201ENST00000548215 CNOT7Q9UIV1 285 aaKnown RBP12.76□□□□□ -0.37
LINC02403-201ENST00000548215 HPS5Q9UPZ3 1129 aa12.76□□□□□ -0.37
LINC02403-201ENST00000548215 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
LINC02403-201ENST00000548215 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
LINC02403-201ENST00000548215 AKAP11Q9UKA4 1901 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 CEMIPQ8WUJ3 1361 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 RGL2O15211 777 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 GPTP24298 496 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 AMER1Q5JTC6 1135 aaPredicted RBP12.74□□□□□ -0.37
LINC02403-201ENST00000548215 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 CSRNP1Q96S65 589 aa12.74□□□□□ -0.37
LINC02403-201ENST00000548215 GBA2Q9HCG7 927 aaPredicted RBP12.74□□□□□ -0.37
LINC02403-201ENST00000548215 KIF7Q2M1P5 1343 aa12.73□□□□□ -0.37
LINC02403-201ENST00000548215 H7C1D1 291 aa12.73□□□□□ -0.37
LINC02403-201ENST00000548215 TNIP1Q15025 636 aa12.73□□□□□ -0.37
LINC02403-201ENST00000548215 HABP4Q5JVS0 413 aaKnown RBP12.73□□□□□ -0.37
LINC02403-201ENST00000548215 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
LINC02403-201ENST00000548215 TMX4Q9H1E5 349 aaPredicted RBP12.73□□□□□ -0.37
LINC02403-201ENST00000548215 VPS33BQ9H267 617 aa12.73□□□□□ -0.37
LINC02403-201ENST00000548215 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
LINC02403-201ENST00000548215 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
LINC02403-201ENST00000548215 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
LINC02403-201ENST00000548215 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
LINC02403-201ENST00000548215 KRT26Q7Z3Y9 468 aa12.72□□□□□ -0.37
LINC02403-201ENST00000548215 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
LINC02403-201ENST00000548215 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
LINC02403-201ENST00000548215 PHACTR3Q96KR7 559 aa12.72□□□□□ -0.37
LINC02403-201ENST00000548215 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
LINC02403-201ENST00000548215 ATP6V0A2Q9Y487 856 aa12.72□□□□□ -0.37
LINC02403-201ENST00000548215 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
LINC02403-201ENST00000548215 CDHR2Q9BYE9 1310 aa12.71□□□□□ -0.37
LINC02403-201ENST00000548215 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
LINC02403-201ENST00000548215 TBC1D10BQ4KMP7 808 aaPredicted RBP12.71□□□□□ -0.37
LINC02403-201ENST00000548215 DPP8Q6V1X1 898 aaPredicted RBP12.71□□□□□ -0.37
LINC02403-201ENST00000548215 MCM10Q7L590 875 aa12.71□□□□□ -0.37
LINC02403-201ENST00000548215 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
LINC02403-201ENST00000548215 NUP98P52948 1817 aa12.7□□□□□ -0.38
LINC02403-201ENST00000548215 YDJCA8MPS7 323 aa12.7□□□□□ -0.38
LINC02403-201ENST00000548215 ERVV-1B6SEH8 477 aa12.7□□□□□ -0.38
LINC02403-201ENST00000548215 EGFRP00533 1210 aa12.7□□□□□ -0.38
LINC02403-201ENST00000548215 SLC10A3P09131 477 aa12.7□□□□□ -0.38
LINC02403-201ENST00000548215 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms