RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 RPS6KA4O75676 772 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 OS9Q13438 667 aaPredicted RBP15.3■□□□□ 0.04
RAB5B-204ENST00000548068 HLFQ16534 295 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 PARP10Q53GL7 1025 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 CLEC4GQ6UXB4 293 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 NLRP10Q86W26 655 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 ZBTB38Q8NAP3 1195 aaPredicted RBP15.3■□□□□ 0.04
RAB5B-204ENST00000548068 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 CDHR2Q9BYE9 1310 aa15.3■□□□□ 0.04
RAB5B-204ENST00000548068 LAMB2P55268 1798 aa15.29■□□□□ 0.04
RAB5B-204ENST00000548068 CAMTA2O94983 1202 aa15.29■□□□□ 0.04
RAB5B-204ENST00000548068 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
RAB5B-204ENST00000548068 ZNF34Q8IZ26 560 aa15.29■□□□□ 0.04
RAB5B-204ENST00000548068 BACH2Q9BYV9 841 aa15.29■□□□□ 0.04
RAB5B-204ENST00000548068 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
RAB5B-204ENST00000548068 APBB1O00213 710 aa15.28■□□□□ 0.04
RAB5B-204ENST00000548068 GNPATO15228 680 aa15.28■□□□□ 0.04
RAB5B-204ENST00000548068 TRIM37O94972 964 aa15.28■□□□□ 0.04
RAB5B-204ENST00000548068 AK7Q96M32 723 aa15.28■□□□□ 0.04
RAB5B-204ENST00000548068 PLA2G12BQ9BX93 195 aa15.28■□□□□ 0.04
RAB5B-204ENST00000548068 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
RAB5B-204ENST00000548068 TNS1Q9HBL0 1735 aaKnown RBP15.27■□□□□ 0.04
RAB5B-204ENST00000548068 GPTP24298 496 aa15.27■□□□□ 0.04
RAB5B-204ENST00000548068 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.04
RAB5B-204ENST00000548068 BMP2KLQ5H9B9 411 aa15.27■□□□□ 0.04
RAB5B-204ENST00000548068 UBR3Q6ZT12 1888 aa15.27■□□□□ 0.03
RAB5B-204ENST00000548068 FOXO4P98177 505 aa15.26■□□□□ 0.03
RAB5B-204ENST00000548068 EPHA10Q5JZY3 1008 aa15.26■□□□□ 0.03
RAB5B-204ENST00000548068 LMBR1LQ6UX01 489 aa15.26■□□□□ 0.03
RAB5B-204ENST00000548068 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
RAB5B-204ENST00000548068 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
RAB5B-204ENST00000548068 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
RAB5B-204ENST00000548068 AOX1Q06278 1338 aa15.25■□□□□ 0.03
RAB5B-204ENST00000548068 SMARCA5O60264 1052 aaPredicted RBP15.25■□□□□ 0.03
RAB5B-204ENST00000548068 ZPR1O75312 459 aa15.25■□□□□ 0.03
RAB5B-204ENST00000548068 KCNQ4P56696 695 aa15.25■□□□□ 0.03
RAB5B-204ENST00000548068 PLEKHM2Q8IWE5 1019 aa15.25■□□□□ 0.03
RAB5B-204ENST00000548068 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
RAB5B-204ENST00000548068 RGS17Q9UGC6 210 aaPredicted RBP15.25■□□□□ 0.03
RAB5B-204ENST00000548068 NARFQ9UHQ1 456 aa15.25■□□□□ 0.03
RAB5B-204ENST00000548068 COL24A1Q17RW2 1714 aa15.25■□□□□ 0.03
RAB5B-204ENST00000548068 UBN2Q6ZU65 1347 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 SH3TC1Q8TE82 1336 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 PLSCR1O15162 318 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 EIF5BO60841 1220 aaKnown RBP15.24■□□□□ 0.03
RAB5B-204ENST00000548068 C8orf34Q49A92 452 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 POTEAQ6S8J7 498 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 FAM89AQ96GI7 184 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 UTP14AQ9BVJ6 771 aaKnown RBP15.24■□□□□ 0.03
RAB5B-204ENST00000548068 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 NIP7Q9Y221 180 aaKnown RBP eCLIP15.24■□□□□ 0.03
RAB5B-204ENST00000548068 CHMP3Q9Y3E7 222 aa15.24■□□□□ 0.03
RAB5B-204ENST00000548068 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
RAB5B-204ENST00000548068 RTL5Q5HYW3 569 aaPredicted RBP15.23■□□□□ 0.03
RAB5B-204ENST00000548068 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
RAB5B-204ENST00000548068 CLASRPQ8N2M8 674 aaKnown RBP15.23■□□□□ 0.03
RAB5B-204ENST00000548068 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
RAB5B-204ENST00000548068 PA2G4Q9UQ80 394 aaKnown RBP15.23■□□□□ 0.03
RAB5B-204ENST00000548068 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
RAB5B-204ENST00000548068 IRS4O14654 1257 aaPredicted RBP15.22■□□□□ 0.03
RAB5B-204ENST00000548068 PDE8AO60658 829 aa15.22■□□□□ 0.03
RAB5B-204ENST00000548068 MX1P20591 662 aa15.22■□□□□ 0.03
RAB5B-204ENST00000548068 PTPN12Q05209 780 aaKnown RBP15.22■□□□□ 0.03
RAB5B-204ENST00000548068 CCDC57Q2TAC2 916 aa15.22■□□□□ 0.03
RAB5B-204ENST00000548068 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
RAB5B-204ENST00000548068 GPATCH3Q96I76 525 aa15.22■□□□□ 0.03
RAB5B-204ENST00000548068 LRRC4BQ9NT99 713 aa15.22■□□□□ 0.03
RAB5B-204ENST00000548068 STAP2Q9UGK3 403 aa15.22■□□□□ 0.03
RAB5B-204ENST00000548068 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
RAB5B-204ENST00000548068 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 APBA3O96018 575 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 CSF1RP07333 972 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 SSFA2P28290 1259 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 RFC4P35249 363 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 PDE1AP54750 535 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 CTSWP56202 376 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 IL1RAPL2Q9NP60 686 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 TUBGCP6Q96RT7 1819 aa15.21■□□□□ 0.03
RAB5B-204ENST00000548068 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
RAB5B-204ENST00000548068 CIAO1O76071 339 aa15.2■□□□□ 0.02
RAB5B-204ENST00000548068 NTSR2O95665 410 aa15.2■□□□□ 0.02
RAB5B-204ENST00000548068 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
RAB5B-204ENST00000548068 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
RAB5B-204ENST00000548068 C16orf71Q8IYS4 520 aaPredicted RBP15.2■□□□□ 0.02
RAB5B-204ENST00000548068 BCL11AQ9H165 835 aa15.2■□□□□ 0.02
RAB5B-204ENST00000548068 SIL1Q9H173 461 aa15.2■□□□□ 0.02
RAB5B-204ENST00000548068 TTC41PQ6P2S7 1318 aa15.19■□□□□ 0.02
RAB5B-204ENST00000548068 IFIT2P09913 472 aaKnown RBP15.19■□□□□ 0.02
RAB5B-204ENST00000548068 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
RAB5B-204ENST00000548068 TAF7LQ5H9L4 462 aa15.19■□□□□ 0.02
RAB5B-204ENST00000548068 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
RAB5B-204ENST00000548068 OTUD7AQ8TE49 926 aaPredicted RBP15.19■□□□□ 0.02
RAB5B-204ENST00000548068 ARHGEF1Q92888 912 aaKnown RBP15.19■□□□□ 0.02
RAB5B-204ENST00000548068 UPF2Q9HAU5 1272 aaKnown RBP15.19■□□□□ 0.02
RAB5B-204ENST00000548068 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
RAB5B-204ENST00000548068 ANKRD18BA2A2Z9 1011 aa15.18■□□□□ 0.02
RAB5B-204ENST00000548068 ERC2O15083 957 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms