RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 K7ELQ4 463 aaPredicted RBP14.34□□□□□ -0.11
RNF41-203ENST00000547967 ZBTB1Q9Y2K1 713 aa14.34□□□□□ -0.11
RNF41-203ENST00000547967 CYP19A1P11511 503 aaPredicted RBP14.33□□□□□ -0.11
RNF41-203ENST00000547967 GPTP24298 496 aa14.33□□□□□ -0.11
RNF41-203ENST00000547967 TCIRG1Q13488 830 aa14.33□□□□□ -0.11
RNF41-203ENST00000547967 NGLY1Q96IV0 654 aa14.33□□□□□ -0.11
RNF41-203ENST00000547967 CCDC85AQ96PX6 553 aaPredicted RBP14.33□□□□□ -0.11
RNF41-203ENST00000547967 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.11
RNF41-203ENST00000547967 SPATA31A5Q5VU36 1347 aa14.33□□□□□ -0.12
RNF41-203ENST00000547967 SPATA31A7Q8IWB4 1347 aa14.33□□□□□ -0.12
RNF41-203ENST00000547967 USP42Q9H9J4 1324 aaKnown RBP14.33□□□□□ -0.12
RNF41-203ENST00000547967 HLFQ16534 295 aa14.33□□□□□ -0.12
RNF41-203ENST00000547967 FAM89AQ96GI7 184 aa14.33□□□□□ -0.12
RNF41-203ENST00000547967 CDCA7Q9BWT1 371 aaPredicted RBP14.33□□□□□ -0.12
RNF41-203ENST00000547967 THRAP3Q9Y2W1 955 aaKnown RBP14.33□□□□□ -0.12
RNF41-203ENST00000547967 TUBGCP6Q96RT7 1819 aa14.33□□□□□ -0.12
RNF41-203ENST00000547967 PLCH1Q4KWH8 1693 aa14.33□□□□□ -0.12
RNF41-203ENST00000547967 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
RNF41-203ENST00000547967 ZNF594Q96JF6 807 aaPredicted RBP14.32□□□□□ -0.12
RNF41-203ENST00000547967 PALD1Q9ULE6 856 aa14.32□□□□□ -0.12
RNF41-203ENST00000547967 SYNE4Q8N205 404 aa14.32□□□□□ -0.12
RNF41-203ENST00000547967 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
RNF41-203ENST00000547967 ISCA1Q9BUE6 129 aa14.31□□□□□ -0.12
RNF41-203ENST00000547967 MYT1Q01538 1121 aa14.31□□□□□ -0.12
RNF41-203ENST00000547967 DIAPH3Q9NSV4 1193 aa14.31□□□□□ -0.12
RNF41-203ENST00000547967 CHMP5Q9NZZ3 219 aa14.31□□□□□ -0.12
RNF41-203ENST00000547967 TNNI3KQ59H18 835 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 FPGT-TNNI3KV9GXZ4 949 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 SGSM2O43147 1006 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 KCNQ2O43526 872 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 MCCP23508 829 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 NEK4P51957 841 aa14.3□□□□□ -0.12
RNF41-203ENST00000547967 DBNLQ9UJU6 430 aaKnown RBP14.3□□□□□ -0.12
RNF41-203ENST00000547967 ST18O60284 1047 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 ATP6V1AP38606 617 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 GIGYF2Q6Y7W6 1299 aaKnown RBP14.29□□□□□ -0.12
RNF41-203ENST00000547967 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
RNF41-203ENST00000547967 COL15A1P39059 1388 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 AK9Q5TCS8 1911 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 LRRC24Q50LG9 513 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 EVI5LQ96CN4 794 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 NUP188Q5SRE5 1749 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 DEKP35659 375 aaKnown RBP14.29□□□□□ -0.12
RNF41-203ENST00000547967 KIAA1211Q6ZU35 1233 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 DBNDD2Q9BQY9 259 aa14.29□□□□□ -0.12
RNF41-203ENST00000547967 TIMM10P62072 90 aa14.28□□□□□ -0.12
RNF41-203ENST00000547967 NOL8Q76FK4 1167 aaKnown RBP14.28□□□□□ -0.12
RNF41-203ENST00000547967 DZIP3Q86Y13 1208 aaKnown RBP14.28□□□□□ -0.12
RNF41-203ENST00000547967 PUS3Q9BZE2 481 aaKnown RBP14.28□□□□□ -0.12
RNF41-203ENST00000547967 UPF3BQ9BZI7 483 aaKnown RBP14.28□□□□□ -0.12
RNF41-203ENST00000547967 ATG9AQ7Z3C6 839 aa14.28□□□□□ -0.12
RNF41-203ENST00000547967 LOC102724428A0A0B4J2F2 783 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 SIK1P57059 783 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 BARGINQ6ZT62 677 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 FAM227BQ96M60 508 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 FSD1Q9BTV5 496 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 SLIT2O94813 1529 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 NRAPQ86VF7 1730 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 TRIM28Q13263 835 aaKnown RBP14.27□□□□□ -0.13
RNF41-203ENST00000547967 NLRP10Q86W26 655 aa14.27□□□□□ -0.13
RNF41-203ENST00000547967 ZBTB38Q8NAP3 1195 aaPredicted RBP14.27□□□□□ -0.13
RNF41-203ENST00000547967 DOT1LQ8TEK3 1739 aa14.26□□□□□ -0.13
RNF41-203ENST00000547967 FAM177BA6PVY3 158 aa14.26□□□□□ -0.13
RNF41-203ENST00000547967 DDIT3P35638 169 aa14.26□□□□□ -0.13
RNF41-203ENST00000547967 KCNQ4P56696 695 aa14.26□□□□□ -0.13
RNF41-203ENST00000547967 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
RNF41-203ENST00000547967 LSG1Q9H089 658 aaKnown RBP14.26□□□□□ -0.13
RNF41-203ENST00000547967 PCCAP05165 728 aaPredicted RBP14.26□□□□□ -0.13
RNF41-203ENST00000547967 CRKLP46109 303 aaKnown RBP14.26□□□□□ -0.13
RNF41-203ENST00000547967 RUFY2Q8WXA3 655 aa14.26□□□□□ -0.13
RNF41-203ENST00000547967 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
RNF41-203ENST00000547967 EYA2O00167 538 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 HSPA4P34932 840 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 IL6STP40189 918 aaPredicted RBP14.25□□□□□ -0.13
RNF41-203ENST00000547967 PTH1RQ03431 593 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 ITPK1Q13572 414 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 TJP1Q07157 1748 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 RAD50Q92878 1312 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 NMIQ13287 307 aaPredicted RBP14.25□□□□□ -0.13
RNF41-203ENST00000547967 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 FAM182BQ5T319 152 aa14.25□□□□□ -0.13
RNF41-203ENST00000547967 INTS5Q6P9B9 1019 aaKnown RBP14.25□□□□□ -0.13
RNF41-203ENST00000547967 LRP6O75581 1613 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 WNK3Q9BYP7 1800 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 ATP5JP18859 108 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 IL15P40933 162 aaPredicted RBP14.24□□□□□ -0.13
RNF41-203ENST00000547967 CCDC87Q9NVE4 849 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 CHGBP05060 677 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 ANAPC15P60006 121 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 PTF1AQ7RTS3 328 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 RASEFQ8IZ41 740 aa14.24□□□□□ -0.13
RNF41-203ENST00000547967 JCADQ9P266 1359 aa14.23□□□□□ -0.13
RNF41-203ENST00000547967 BCL9LQ86UU0 1499 aa14.23□□□□□ -0.13
RNF41-203ENST00000547967 A0A0D9SFI3 127 aa14.23□□□□□ -0.13
RNF41-203ENST00000547967 IFIT5Q13325 482 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms