RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 GRM1Q13255 1194 aa12.58□□□□□ -0.4
CDK4-205ENST00000547853 CST9Q5W186 159 aa12.58□□□□□ -0.4
CDK4-205ENST00000547853 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
CDK4-205ENST00000547853 AKAP11Q9UKA4 1901 aa12.57□□□□□ -0.4
CDK4-205ENST00000547853 TRAF5O00463 557 aa12.57□□□□□ -0.4
CDK4-205ENST00000547853 CA12O43570 354 aa12.57□□□□□ -0.4
CDK4-205ENST00000547853 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
CDK4-205ENST00000547853 SCNN1DP51172 638 aa12.57□□□□□ -0.4
CDK4-205ENST00000547853 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
CDK4-205ENST00000547853 NUP98P52948 1817 aa12.56□□□□□ -0.4
CDK4-205ENST00000547853 KLRG2A4D1S0 409 aaPredicted RBP12.56□□□□□ -0.4
CDK4-205ENST00000547853 NPR1P16066 1061 aa12.56□□□□□ -0.4
CDK4-205ENST00000547853 MAP2K2P36507 400 aa12.56□□□□□ -0.4
CDK4-205ENST00000547853 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
CDK4-205ENST00000547853 EXOC6Q8TAG9 804 aa12.56□□□□□ -0.4
CDK4-205ENST00000547853 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
CDK4-205ENST00000547853 BACH2Q9BYV9 841 aa12.56□□□□□ -0.4
CDK4-205ENST00000547853 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
CDK4-205ENST00000547853 NPHP1O15259 732 aa12.55□□□□□ -0.4
CDK4-205ENST00000547853 PDE4AP27815 886 aa12.55□□□□□ -0.4
CDK4-205ENST00000547853 DGKZQ13574 1117 aa12.55□□□□□ -0.4
CDK4-205ENST00000547853 RTKN2Q8IZC4 609 aa12.55□□□□□ -0.4
CDK4-205ENST00000547853 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
CDK4-205ENST00000547853 SAPCD2Q86UD0 394 aa12.54□□□□□ -0.4
CDK4-205ENST00000547853 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
CDK4-205ENST00000547853 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
CDK4-205ENST00000547853 EPS15P42566 896 aa12.53□□□□□ -0.4
CDK4-205ENST00000547853 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
CDK4-205ENST00000547853 NBPF5PQ86XG9 351 aaPredicted RBP12.53□□□□□ -0.4
CDK4-205ENST00000547853 PSMD1Q99460 953 aa12.53□□□□□ -0.4
CDK4-205ENST00000547853 PANK3Q9H999 370 aa12.53□□□□□ -0.4
CDK4-205ENST00000547853 ABCC12Q96J65 1359 aa12.53□□□□□ -0.4
CDK4-205ENST00000547853 LAMB2P55268 1798 aa12.53□□□□□ -0.4
CDK4-205ENST00000547853 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
CDK4-205ENST00000547853 A1BGP04217 495 aa12.52□□□□□ -0.41
CDK4-205ENST00000547853 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.41
CDK4-205ENST00000547853 SOX10P56693 466 aa12.52□□□□□ -0.41
CDK4-205ENST00000547853 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
CDK4-205ENST00000547853 CENPQQ7L2Z9 268 aaPredicted RBP12.52□□□□□ -0.41
CDK4-205ENST00000547853 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.41
CDK4-205ENST00000547853 SYNE4Q8N205 404 aa12.52□□□□□ -0.41
CDK4-205ENST00000547853 HHIPL1Q96JK4 782 aa12.52□□□□□ -0.41
CDK4-205ENST00000547853 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.41
CDK4-205ENST00000547853 GJA3Q9Y6H8 435 aa12.52□□□□□ -0.41
CDK4-205ENST00000547853 HMOX1P09601 288 aa12.51□□□□□ -0.41
CDK4-205ENST00000547853 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDK4-205ENST00000547853 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
CDK4-205ENST00000547853 USP50Q70EL3 339 aaPredicted RBP12.51□□□□□ -0.41
CDK4-205ENST00000547853 SLC51AQ86UW1 340 aa12.51□□□□□ -0.41
CDK4-205ENST00000547853 EIF6P56537 245 aaKnown RBP12.5□□□□□ -0.41
CDK4-205ENST00000547853 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
CDK4-205ENST00000547853 JDP2Q8WYK2 163 aa12.5□□□□□ -0.41
CDK4-205ENST00000547853 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
CDK4-205ENST00000547853 CEMIPQ8WUJ3 1361 aa12.5□□□□□ -0.41
CDK4-205ENST00000547853 POLR2AP24928 1970 aaKnown RBP12.49□□□□□ -0.41
CDK4-205ENST00000547853 CELF2O95319 508 aaKnown RBP12.49□□□□□ -0.41
CDK4-205ENST00000547853 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
CDK4-205ENST00000547853 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
CDK4-205ENST00000547853 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
CDK4-205ENST00000547853 ZIC5Q96T25 663 aa12.49□□□□□ -0.41
CDK4-205ENST00000547853 HTTP42858 3142 aa12.48□□□□□ -0.41
CDK4-205ENST00000547853 LRRC37AA6NMS7 1700 aa12.48□□□□□ -0.41
CDK4-205ENST00000547853 PIP4K2AP48426 406 aaPredicted RBP12.48□□□□□ -0.41
CDK4-205ENST00000547853 AAMPQ13685 434 aa12.48□□□□□ -0.41
CDK4-205ENST00000547853 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
CDK4-205ENST00000547853 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
CDK4-205ENST00000547853 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
CDK4-205ENST00000547853 DDX60Q8IY21 1712 aaKnown RBP12.48□□□□□ -0.41
CDK4-205ENST00000547853 DUOX1Q9NRD9 1551 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 ZNF521Q96K83 1311 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 RGL2O15211 777 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 GOLGA2Q08379 1002 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 NBR1Q14596 966 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
CDK4-205ENST00000547853 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 GLIS2Q9BZE0 524 aaPredicted RBP12.47□□□□□ -0.41
CDK4-205ENST00000547853 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
CDK4-205ENST00000547853 GPRC5DQ9NZD1 345 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
CDK4-205ENST00000547853 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
CDK4-205ENST00000547853 MKI67P46013 3256 aaKnown RBP12.47□□□□□ -0.41
CDK4-205ENST00000547853 PPP2R1AP30153 589 aa12.46□□□□□ -0.41
CDK4-205ENST00000547853 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
CDK4-205ENST00000547853 TEFQ10587 303 aa12.46□□□□□ -0.41
CDK4-205ENST00000547853 NOGQ13253 232 aa12.46□□□□□ -0.41
CDK4-205ENST00000547853 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
CDK4-205ENST00000547853 RBBP6Q7Z6E9 1792 aaKnown RBP12.46□□□□□ -0.42
CDK4-205ENST00000547853 IBTKQ9P2D0 1353 aaPredicted RBP12.45□□□□□ -0.42
CDK4-205ENST00000547853 CDHR2Q9BYE9 1310 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 KCNQ3O43525 872 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
CDK4-205ENST00000547853 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 TPTE2Q6XPS3 522 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 NPM2Q86SE8 214 aaKnown RBP12.45□□□□□ -0.42
CDK4-205ENST00000547853 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 SAGE1Q9NXZ1 904 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 PGAP2Q9UHJ9 254 aa12.45□□□□□ -0.42
CDK4-205ENST00000547853 DUSP27Q5VZP5 1158 aa12.44□□□□□ -0.42
CDK4-205ENST00000547853 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms