RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 PHACTR1Q9C0D0 580 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 RBM19Q9Y4C8 960 aaKnown RBP5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 SFI1A8K8P3 1242 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 RGS9O75916 674 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 EPB42P16452 691 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 TPCN2Q8NHX9 752 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 GAS2L2Q8NHY3 880 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 PNMA5Q96PV4 448 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 SSBP4Q9BWG4 385 aaPredicted RBP5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 ALG2Q9H553 416 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 GOLGA2P5Q9HBQ8 144 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 FRRS1LQ9P0K9 344 aa5.69□□□□□ -1.5
DEPDC4-204ENST00000547823 AFF1P51825 1210 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-204ENST00000547823 TBC1D8BQ0IIM8 1120 aa5.68□□□□□ -1.5
DEPDC4-204ENST00000547823 PSAPL1Q6NUJ1 521 aa5.68□□□□□ -1.5
DEPDC4-204ENST00000547823 BTLAQ7Z6A9 289 aa5.68□□□□□ -1.5
DEPDC4-204ENST00000547823 LARGE2Q8N3Y3 721 aa5.68□□□□□ -1.5
DEPDC4-204ENST00000547823 HSH2DQ96JZ2 352 aa5.68□□□□□ -1.5
DEPDC4-204ENST00000547823 C11orf16Q9NQ32 467 aa5.68□□□□□ -1.5
DEPDC4-204ENST00000547823 PALM3A6NDB9 673 aaPredicted RBP5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 ARID4AP29374 1257 aaPredicted RBP5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 MCM6Q14566 821 aa5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 TBCELQ5QJ74 424 aa5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 CCDC102BQ68D86 513 aa5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 TSPAN10Q9H1Z9 355 aaPredicted RBP5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 DNAJB12Q9NXW2 375 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.67□□□□□ -1.5
DEPDC4-204ENST00000547823 PAX4O43316 350 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 PPP1R12BO60237 982 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 CCINQ13939 588 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 SH3PXD2AQ5TCZ1 1133 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 MSL1Q68DK7 614 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 MCTP1Q6DN14 999 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 ILDR2Q71H61 639 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 FBXO11Q86XK2 927 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 NUDT8Q8WV74 236 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 HCN4Q9Y3Q4 1203 aa5.66□□□□□ -1.5
DEPDC4-204ENST00000547823 TGFBR3LH3BV60 316 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 MAP3K6O95382 1288 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 IGF2-ASQ6U949 168 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 SHISA2Q6UWI4 295 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 ALDH16A1Q8IZ83 802 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 SIX5Q8N196 739 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 WFDC12Q8WWY7 111 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 TTC9Q92623 222 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 IGFLR1Q9H665 355 aa5.65□□□□□ -1.5
DEPDC4-204ENST00000547823 USP17L3A6NCW0 530 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 USP17L4A6NCW7 530 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 TXKP42681 527 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 RTN1Q16799 776 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 USP17L2Q6R6M4 530 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 USP17L1Q7RTZ2 530 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 WFDC8Q8IUA0 241 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 DMRTC2Q8IXT2 367 aaPredicted RBP5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 ZNF280CQ8ND82 737 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 GSX2Q9BZM3 304 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 SRA1Q9HD15 236 aaKnown RBP5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 COG6Q9Y2V7 657 aa5.64□□□□□ -1.51
DEPDC4-204ENST00000547823 ZBTB7BO15156 539 aaPredicted RBP5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 GSC2O15499 205 aa5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 PRR23CQ6ZRP0 262 aa5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 FAM35AQ86V20 835 aa5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 DEPDC4Q8N2C3 294 aa5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 OGFOD1Q8N543 542 aa5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 PCMTD2Q9NV79 361 aa5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 NAGPAQ9UK23 515 aa5.63□□□□□ -1.51
DEPDC4-204ENST00000547823 RAD21O60216 631 aa5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 NFKB1P19838 968 aa5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 CLDN10P78369 228 aa5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 C2orf49Q9BVC5 232 aaPredicted RBP5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 KIAA1024Q9UPX6 916 aa5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 COL17A1Q9UMD9 1497 aaPredicted RBP5.62□□□□□ -1.51
DEPDC4-204ENST00000547823 ATP9BO43861 1147 aa5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 PTCD1O75127 700 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 NOS3P29474 1203 aa5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 IREB2P48200 963 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 GPLD1P80108 840 aa5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 ELMSAN1Q6PJG2 1045 aa5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 MAP4K3Q8IVH8 894 aa5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 TRPM4Q8TD43 1214 aa5.61□□□□□ -1.51
DEPDC4-204ENST00000547823 ATAD2Q6PL18 1390 aa5.6□□□□□ -1.51
DEPDC4-204ENST00000547823 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
DEPDC4-204ENST00000547823 CACTIN-AS1Q8N1I8 211 aa5.6□□□□□ -1.51
DEPDC4-204ENST00000547823 TSEN2Q8NCE0 465 aaKnown RBP5.6□□□□□ -1.51
DEPDC4-204ENST00000547823 LPIN3Q9BQK8 851 aa5.6□□□□□ -1.51
DEPDC4-204ENST00000547823 MRPL18Q9H0U6 180 aaKnown RBP5.6□□□□□ -1.51
DEPDC4-204ENST00000547823 AKTIPQ9H8T0 292 aa5.6□□□□□ -1.51
DEPDC4-204ENST00000547823 C21orf2O43822 256 aa5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 CPB1P15086 417 aa5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 YBX3P16989 372 aaKnown RBP eCLIP5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 FSTP19883 344 aa5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 SEC13P55735 322 aa5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 GRIK5Q16478 980 aa5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 DHX32Q7L7V1 743 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 DZIP1LQ8IYY4 767 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 TMEM130Q8N3G9 435 aa5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 MKRN1Q9UHC7 482 aaKnown RBP5.59□□□□□ -1.51
DEPDC4-204ENST00000547823 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms