RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 NUP98P52948 1817 aa13.04□□□□□ -0.32
CACNB3-206ENST00000547693 AFDNP55196 1824 aaKnown RBP13.04□□□□□ -0.32
CACNB3-206ENST00000547693 H7C1W4 665 aa13.03□□□□□ -0.32
CACNB3-206ENST00000547693 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
CACNB3-206ENST00000547693 ZNF34Q8IZ26 560 aa13.03□□□□□ -0.32
CACNB3-206ENST00000547693 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
CACNB3-206ENST00000547693 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
CACNB3-206ENST00000547693 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-206ENST00000547693 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
CACNB3-206ENST00000547693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
CACNB3-206ENST00000547693 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
CACNB3-206ENST00000547693 PCCAP05165 728 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-206ENST00000547693 NBPF7P0C2Y1 421 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-206ENST00000547693 GPTP24298 496 aa13.02□□□□□ -0.33
CACNB3-206ENST00000547693 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
CACNB3-206ENST00000547693 ZBTB38Q8NAP3 1195 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-206ENST00000547693 GCC1Q96CN9 775 aa13.02□□□□□ -0.33
CACNB3-206ENST00000547693 C1orf115Q9H7X2 142 aa13.02□□□□□ -0.33
CACNB3-206ENST00000547693 STK32BQ9NY57 414 aa13.02□□□□□ -0.33
CACNB3-206ENST00000547693 ZBTB47Q9UFB7 747 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-206ENST00000547693 NIP7Q9Y221 180 aaKnown RBP eCLIP13.02□□□□□ -0.33
CACNB3-206ENST00000547693 PHF14O94880 888 aa13.01□□□□□ -0.33
CACNB3-206ENST00000547693 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
CACNB3-206ENST00000547693 CEP85Q6P2H3 762 aa13.01□□□□□ -0.33
CACNB3-206ENST00000547693 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
CACNB3-206ENST00000547693 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
CACNB3-206ENST00000547693 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
CACNB3-206ENST00000547693 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
CACNB3-206ENST00000547693 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
CACNB3-206ENST00000547693 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
CACNB3-206ENST00000547693 GTF2E1P29083 439 aaPredicted RBP13□□□□□ -0.33
CACNB3-206ENST00000547693 AKT1S1Q96B36 256 aa13□□□□□ -0.33
CACNB3-206ENST00000547693 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
CACNB3-206ENST00000547693 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
CACNB3-206ENST00000547693 MSH5O43196 834 aa12.99□□□□□ -0.33
CACNB3-206ENST00000547693 IGHDP01880 384 aa12.99□□□□□ -0.33
CACNB3-206ENST00000547693 C1QTNF8P60827 252 aa12.99□□□□□ -0.33
CACNB3-206ENST00000547693 HSP90AB4PQ58FF6 505 aa12.99□□□□□ -0.33
CACNB3-206ENST00000547693 UBR3Q6ZT12 1888 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 SRGAP3O43295 1099 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 MTX1Q13505 466 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 NLGN1Q8N2Q7 840 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
CACNB3-206ENST00000547693 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 NPHP1O15259 732 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 PDE8AO60658 829 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 CASP7P55210 303 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 SUSD4Q5VX71 490 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 SSH3Q8TE77 659 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
CACNB3-206ENST00000547693 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
CACNB3-206ENST00000547693 BCORQ6W2J9 1755 aa12.97□□□□□ -0.33
CACNB3-206ENST00000547693 IRS4O14654 1257 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-206ENST00000547693 RAB11FIP3O75154 756 aa12.96□□□□□ -0.33
CACNB3-206ENST00000547693 POLA2Q14181 598 aa12.96□□□□□ -0.33
CACNB3-206ENST00000547693 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-206ENST00000547693 TBC1D9BQ66K14 1250 aa12.96□□□□□ -0.33
CACNB3-206ENST00000547693 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.33
CACNB3-206ENST00000547693 NBPF5PQ86XG9 351 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-206ENST00000547693 SIRT2Q8IXJ6 389 aa12.96□□□□□ -0.33
CACNB3-206ENST00000547693 SMC5Q8IY18 1101 aa12.96□□□□□ -0.33
CACNB3-206ENST00000547693 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
CACNB3-206ENST00000547693 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-206ENST00000547693 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
CACNB3-206ENST00000547693 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
CACNB3-206ENST00000547693 GYS1P13807 737 aa12.95□□□□□ -0.34
CACNB3-206ENST00000547693 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
CACNB3-206ENST00000547693 RABL6Q3YEC7 729 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-206ENST00000547693 LMBR1LQ6UX01 489 aa12.95□□□□□ -0.34
CACNB3-206ENST00000547693 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
CACNB3-206ENST00000547693 JARID2Q92833 1246 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-206ENST00000547693 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
CACNB3-206ENST00000547693 SCN7AQ01118 1682 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
CACNB3-206ENST00000547693 FOXO4P98177 505 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
CACNB3-206ENST00000547693 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-206ENST00000547693 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 SLC10A5Q5PT55 438 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-206ENST00000547693 ERC1Q8IUD2 1116 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 KAZALD1Q96I82 304 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
CACNB3-206ENST00000547693 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
CACNB3-206ENST00000547693 NTSR2O95665 410 aa12.93□□□□□ -0.34
CACNB3-206ENST00000547693 CSF1RP07333 972 aa12.93□□□□□ -0.34
CACNB3-206ENST00000547693 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
CACNB3-206ENST00000547693 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
CACNB3-206ENST00000547693 TM4SF1P30408 202 aa12.92□□□□□ -0.34
CACNB3-206ENST00000547693 ST5P78524 1137 aa12.92□□□□□ -0.34
CACNB3-206ENST00000547693 IFIT5Q13325 482 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms